Physiological and molecular characterization of a Synechocystis sp. PCC 6803 mutant lacking histidine kinase Slr1759 and response regulator Slr1760

Zeitschrift fur Naturforschung - Section C Journal of Biosciences

Volumn 61, Issue 11-12, 2006, Pages 865-878

  Nodop, Anke ^a   Suzuki, Iwane ^b,c   Barsch, Aiko ^a   Schröder, Ann Kristin ^a   Niehaus, Karsten ^a   Staiger, Dorothee ^a   Pistorius, Elfriede K ^a   Michel, Klaus Peter ^a  

^a BIELEFELD UNIVERSITY   (Germany)

^b NATIONAL INSTITUTE FOR BASIC BIOLOGY   (Japan)

^c UNIVERSITY OF TSUKUBA   (Japan)

Author keywords

Histidine kinase; Synechocystis sp. PCC 6803; Two component system

Indexed keywords

SYNECHOCYSTIS; SYNECHOCYSTIS SP.; SYNECHOCYSTIS SP. PCC 6803;

EID: 33846488057     PISSN: 09395075     EISSN: None     Source Type: Journal    
DOI: 10.1515/znc-2006-11-1215     Document Type: Article

References (58)

1. Anantharaman V. and Aravind L. (2001), The CHASE domain: a predicted ligand-binding module in plant cytokinin receptors and other eukaryotic and bacterial receptors. Trends Biochem. Sci. 26, 579-582.
2. Appleby J. L., Parkinson J. S., and Bourret R. B. (1996), Signal transduction via the multi-step phosphorelay: Not necessarily a road less traveled. Cell 86, 845-848.
3. Badger M. R. and Price G. D. (2003), CO2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution. J. Exp. Bot. 54, 609-622.
4. Badger M. R., Hanson D., and Price G. D. (2002), Evolution and diversity of CO2 concentrating mechanisms in cyanobacteria. Funct. Plant Biol. 29, 161-173.
5. Barsch A., Patschkowski T., and Niehaus K. (2004), Comprehensive metabolite profiling of Sinorhizobium meliloti using gas chromatography-mass spectrometry. Funct. Integr. Genomics 4, 219-230.
6. Berger S., Ellersiek U., Kinzelt D., and Steinmüller K. (1993), Immunopurification of a subcomplex of the NAD(P)H-plastoquinone-oxidoreductase from the cyanobacterium Synechocystis sp. PCC 6803. FEBS Lett. 326, 249-250.
7. Chang C. and Stewart R. C. (1998), The two-component system. Regulation of diverse signaling pathways in prokaryotes and eukaryotes. Plant Physiol. 117, 723-731.
8. Engels A., Kahmann U., Ruppel H. G., and Pistorius E. K. (1997), Isolation, partial characterization and localization of a dihydrolipoamide dehydrogenase from the cyanobacterium Synechocystis PCC 6803. Biochim. Biophys. Acta 1340, 33-44.
9. Engels D. H., Lott A., Schmid G. H., and Pistorius E. K. (1994), Inactivation of the water-oxidizing enzyme in manganese stabilizing protein-free mutant cells of the cyanobacteria Synechococcus PCC 7942 and Synechocystis PCC 6803 during dark incubation and conditions leading to photoactivation. Photosynth. Res. 42, 227-244.
10. Friedrich T. and Scheide D. (2000), The respiratory complex I of bacteria, archaea and eukarya and its module common with membrane-bound multisubunit hydrogenases. FEBS Lett. 479, 1-5.
11. Galperin M. Y. (2004), Bacterial signal transduction network in a genomic perspective. Environ. Microbiol. 6, 552-567.
12. Grossman A. R., Bhaya D., and He Q. (2001), Tracking the light environment by cyanobacteria and the dynamic nature of light harvesting. J. Biol. Chem. 276, 11449-11452.
13. Herranen M., Battchikova N., Zhang P., Graf A., Sirpio S., Paakkarinen V., and Aro E. M. (2004), Towards functional proteomics of membrane protein complexes in Synechocystis sp. PCC 6803. Plant Physiol. 134, 470-481.
14. Hirano M., Satoh K., and Katoh S. (1980), Plastoquinone as a common link between photosynthesis and respiration in blue-green alga. Photosynth. Res. 1, 149-162.
15. Howitt C. A., Cooley J. W., Wiskich J. T., and Vermaas W. F. (2001), A strain of Synechocystis sp. PCC 6803 without photosynthetic oxygen evolution and respiratory oxygen consumption: implications for the study of cyclic photosynthetic electron transport. Planta 214, 46-56.
16. Hsiao H. Y., He Q., Van Waasbergen L. G., and Grossman A. R. (2004), Control of photosynthetic and high-light-responsive genes by the histidine kinase DspA: negative and positive regulation and interactions between signal transduction pathways. J. Bacteriol. 186, 3882-3888.
17. Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., and Tabata S. (1996), Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions (supplement). DNA Res. 3, 185-209.
18. Kaneko T., Nakamura Y., Sasamoto S., Watanabe A., Kohara M., Matsumoto M., Shimpo S., Yamada M., and Tabata S. (2003), Structural analysis of four large plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803. DNA Res. 10, 221-228.
19. Kaneko T., Sato S., Nakamura Y., and Tabata S. (2005), Large scale analysis of protein-protein interactions in Synechocystis sp. PCC 6803 using a YTH system. In: 3rd Japan-German Joint Seminar: Functional Genomics of Cyanobacteria. New Approaches for Investigation of Diversity (Tabata S., ed.). Tomiura, Chiba, Japan, pp. 12-13.
20. Kaplan A. and Reinhold L. (1999), CO2 concentrating mechanisms in photosynthetic microorganisms. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50, 539-570.
21. + uptake in cyanobacteria. Plant Physiol. 89, 1220-1225.
22. Matsushika A. and Mizuno T. (1998), A dual-signaling mechanism mediated by the ArcB hybrid sensor kinase containing the histidine-containing phosphotransfer domain in Escherichia coli. J. Bacteriol. 180, 3973-3977.
23. Matthijs H. C., Jeanjean R., Yeremenko N., Huiwman J., Joset F., and Hellingwerf K. J. (2002), Hypothesis: versatile function of ferredoxin-NADP+ reductase in cyanobacteria provides regulation for transient photosystem I-driven cyclic electron transport. Funct. Plant Biol. 29, 201-210.
24. Meunier P. C., Colon-Lopez M. S., and Sherman L. A. (1997), Temporal changes in state transitions and photosystem organization in the unicellular, diazotrophic cyanobacterium Cyanothece sp. ATCC 51142. Plant Physiol. 115, 991-1000.
25. Michel K. P., Thole H. H., and Pistorius E. K. (1996), IdiA, a 34 kDa protein in the cyanobacteria Synechococcus sp. strains PCC 6301 and PCC 7942, is required for growth under iron and manganese limitations. Microbiology 142, 2635-2645.
26. Michel K. P., Krüger F., Pühler A., and Pistorius E. K. (1999), Molecular characterization of idiA and adjacent genes in the cyanobacteria Synechococcus sp. strains PCC 6301 and PCC 7942. Microbiology 145, 1473-1484.
27. Michel K.-P., Nodop A., Suzuki I., Staiger D., and Pistorius E. K. (2005), Comparative analyses of Synechocystis sp. PCC 6803 wild type and the histidine kinase Slr1759-free mutant Hik14. In: 3rd Japan-German Joint Seminar: Functional Genomics of Cyanobacteria. New Approaches for Investigation of Diversity (Tabata S., ed.). Tomiura, Chiba, Japan, pp. 52-53.
28. Mikami K., Kanesaki Y., Suzuki I., and Murata N. (2002), The histidine kinase Hik33 perceives osmotic stress and cold stress in Synechocystis sp. PCC 6803. Mol. Microbiol. 46, 905-915.
29. Mizuno T., Kaneko T., and Tabata S. (1996), Compilation of all genes encoding bacterial two-component signal transducers in the genome of the cyanobacterium Synechocystis sp. strain PCC 6803. DNA Res. 3, 407-414.
30. Mougel C. and Zhulin I. B. (2001), CHASE: an extracellular sensing domain common to transmembrane receptors from prokaryotes, lower eukaryotes and plants. Trends Biochem. Sci. 26, 582-584.
31. Mullineaux C. W. and Allen F. (1990), State 1-State 2 transitions in the cyanobacterium Synechococcus 6301 are controlled by the redox state of electron carriers between photosystem I and II. Photosynth. Res. 23, 297-311.
32. Murata N. and Suzuki I. (2006), Exploitation of genomic sequences in a systematic analysis to access how cyanobacteria sense environmental stress. J. Exp. Bot. 57, 235-247.
33. Ogawa T. and Kaplan A. (1987), The stoichiometry between CO2 and H+ fluxes involved in the transport of inorganic carbon in cyanobacteria. Plant Physiol. 83, 888-891.
34. Ogawa T. and Kaplan A (2003), Inorganic carbon acquisition systems in cyanobacteria. Photosynth. Res. 77, 105-115.
35. Ohkawa H., Pakrasi H. B., and Ogawa T. (2000), Two types of functionally distinct NAD(P)H dehydrogenases in Synechocystis sp. strain PCC 6803. J. Biol. Chem. 275, 31630-31634.
36. Ohkawa H., Sonoda M., Shibata M., and Ogawa T. (2001), Localization of NAD(P)H dehydrogenase in the cyanobacterium Synechocystis sp. strain PCC 6803. J. Bacteriol. 183, 4938-4939.
37. Ohkawa H., Sonoda M., Hagino N., Shibata M., Pakrasi H. B., and Ogawa T. (2002), Functionally distinct NAD(P)H dehydrogenases and their membrane localization in Synechocystis sp. PCC 6803. Funct. Plant Biol. 29, 195-200.
38. Omata T. and Murata N. (1984), Isolation and characterization of three types of membranes from the cyanobacterium Synechocystis PCC 6714. Arch. Microbiol. 139, 113-116.
39. Pernestig A. K., Georgellis D., Romeo T., Suzuki K., Tomenius H., Normark S., and Melefors O. (2003), The Escherichia coli BarA-UvrY two-component system is needed for efficient switching between glycolytic and gluconeogenic carbon sources. J. Bacteriol. 185, 843-853.
40. Philbrick J. B., Diner B. A., and Zilinskas B. A. (1991), Construction and characterization of cyanobacterial mutants lacking the manganese-stabilizing polypeptide of photosystem II. J. Biol. Chem. 266, 13370-13376.
41. Price G. D., Maeda S., Omata T., and Badger M. R. (2002), Modes of active inorganic carbon uptake in the cyanobacterium Synechococcus sp. PCC 7942. Funct. Plant Biol. 29, 131-149.
42. Prommeenate P., Lennon A. M., Markert C., Hippler M., and Nixon P. J. (2004), Subunit composition of NDH-1 complexes of Synechocystis sp. PCC 6803: identification of two new ndh gene products with nuclear-encoded homologues in the chloroplast Ndh complex. J. Biol. Chem. 279, 28165-28173.
43. Reddy K. J., Webb R., and Sherman L. A. (1990), Bacterial RNA isolation with one hour centrifugation in a table-top ultracentrifuge. BioTechniques 8, 250-251.
44. Shibata M., Ohkawa H., Katoh H., Shimoyama M., and Ogawa T. (2002), Two CO2 uptake system in cyanobacteria: Four systems for inorganic carbon acquisition in Synechocystis sp. strain PCC 6803. Funct. Plant Biol. 29, 123-129.
45. Stephan D. P., Ruppel H. G., and Pistorius E. K. (2000), Interrelation between cyanophycin synthesis, L-arginine catabolism and photosynthesis in the cyanobacterium Synechocystis sp. strain PCC 6803. Z. Naturforsch. 55c, 927-942.
46. Stock A. M., Robinson V. L., and Goudreau P. N. (2000), Two-component signal transduction. Annu. Rev. Biochem. 69, 183-215.
47. Suzuki I., Los D. A., Kanesaki Y., Mikami K., and Murata N. (2000), The pathway for perception and transduction of low-temperature signals in Synechocystis. Embo J. 19, 1327-1334.
48. Taylor B. L. and Zhulin I. B. (1999), PAS domains: Internal sensors of oxygen, redox potential, and light. Microbiol. Mol. Biol. Rev. 63, 479-506.
49. Teuber M., Rogner M., and Berry S. (2001), Fluorescent probes for non-invasive bioenergetic studies of whole cyanobacterial cells. Biochim. Biophys. Acta 1506, 31-46.
50. Tölle J., Michel K. P., Kruip J., Kahmann U., Preisfeld A., and Pistorius E. K. (2002), Localization and function of the IdiA homologue Slr1295 in the cyanobacterium Synechocystis sp. strain PCC 6803. Microbiology 148, 3293-3305.
51. Tu C. J., Shrager J., Burnap R. L., Postier B. L., and Grossman A. R. (2004), Consequences of a deletion in dspA on transcript accumulation in Synechocystis sp. strain PCC 6803. J. Bacteriol. 186, 3889-3902.
52. Vermaas W. F. J. (2001), Photosynthesis and respiration in cyanobacteria. In: Encyclopedia of Life Sciences. Nature Publishing Group, London, pp. 1-7.
53. Wang H. L., Postier B. L., and Burnap R. L. (2002), Polymerase chain reaction-based mutageneses identify key transporters belonging to multigene families involved in Na+ and pH homeostasis of Synechocystis sp. PCC 6803. Mol. Microbiol. 44, 1493-1506.
54. West A. H. and Stock A. M. (2001), Histidine kinases and response regulator proteins in two-component signaling systems. Trends Biochem. Sci. 26, 369-376.
55. Yeremenko N., Jeanjean R., Prommeenate P., Krasikov V., Nixon P. J., Vermaas W. F., Havaux M., and Matthijs H. C. (2005), Open reading frame ssr2016 is required for antimycin A-sensitive photosystem I-driven cyclic electron flow in the cyanobacterium Synechocystis sp. PCC 6803. Plant Cell Physiol. 46, 1433-1436.
56. Zhulin I. B. and Taylor B. L. (1998), Correlation of PAS domains with electron transport-associated proteins in completely sequenced microbial genomes. Mol. Microbiol. 29, 1522-1523.
57. Zhulin I. B., Taylor B. L., and Dixon R. (1997), PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and redox. Trends Biochem. Sci. 22, 331-333.
58. Zhulin I. B., Nikolskaya A. N., and Galperin M. Y. (2003), Common extracellular sensory domains in transmembrane receptors for diverse signal transduction pathways in bacteria and archaea. J. Bacteriol. 185, 285-294.