Sulfur-oxidizing bacteria in Soap Lake (Washington State), a meromictic, haloalkaline lake with an unprecedented high sulfide content

Applied and Environmental Microbiology

Volumn 73, Issue 2, 2007, Pages 451-455

  Sorokin, Dimitry Y ^a,b   Foti, Mirjam ^a   Pinkart, Holly C ^c   Muyzer, Gerard ^a  

^a DELFT UNIVERSITY OF TECHNOLOGY   (Netherlands)

^b WINOGRADSKY INSTITUTE OF MICROBIOLOGY   (Russian Federation)

^c CENTRAL WASHINGTON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL CULTURE; GENES; LAKES; OXIDATION; OXYGEN; RNA; SULFIDE MINERALS;

HALOALKALINE LAKE; OXYGEN-SULFIDE GRADIENT; PHENOTYPES; SULFUR-OXIDIZING BACTERIA;

BACTERIA;

RNA 16S; SODIUM CARBONATE; SULFIDE;

ANOXIC CONDITIONS; BACTERIUM; CHEMOAUTOTROPHY; MEROMICTIC LAKE; NEW SPECIES; SPECIES DIVERSITY; SULFIDE;

ALKALINITY; ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM ISOLATE; BACTERIUM ISOLATION; CHEMOLITHOAUTOTROPH; GENE SEQUENCE; LAKE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; POPULATION DENSITY; SEQUENCE ANALYSIS; STRAIN DIFFERENCE; SULFUR OXIDIZING BACTERIUM; THIOALKALIMICROBIUM; THIOALKALIMICROBIUM CYCLICUM; UNITED STATES;

ALKALIES; BACTERIAL TYPING TECHNIQUES; DNA, RIBOSOMAL; FRESH WATER; GAMMAPROTEOBACTERIA; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE; SULFIDES; SULFUR; WASHINGTON;

CALIFORNIA; MONO LAKE; NORTH AMERICA; SOAP LAKE; UNITED STATES; WASHINGTON [UNITED STATES];

THIOALKALIMICROBIUM; THIOALKALIMICROBIUM CYCLICUM;

EID: 33846463823     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.02087-06     Document Type: Article

References (13)

1. Anderson, G. C. 1958. Seasonal characteristics of two saline lakes in Washington. Limnol. Oceanogr. 3:51-68.
2. De Ley, J., H. Caffon, and A. Reinaerts. 1970. The quantitative measurements of hybridization DNA from renaturation rates. Eur. J. Biochem. 12:133-140.
3. Ludwig, W., O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lai, S. Steppi, G. Jobb, W. Forster, I. Brettske, S. Gerber, A. W. Ginhart, O. Gross, S. Grumann, S. Hermann, R. Jost, A. Konig, T. Liss, R. Lussmann, M. May, B. Nonhoff, B. Reichel, R. Strehlow, A. Stamatakis, N. Stuckmann, A. Vilbig, M. Lenke, T. Ludwig, A. Bode, and K. H. Schleifer. 2004. ARB: a software environment for sequence data. Nucleic Acids Res, 32:1363-1371.
4. Marmur, J. 1961. A procedure for isolation of DNA from microorganisms. J. Mol. Biol. 3:208-214.
5. Muyzer, G., A. Teske, C. O. Wirsen, and H. W. Jannasch. 1995. Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch. Microbiol. 164:165-172.
6. 12-bedürfnis phototropher Schwefel bacterien. Arch. Microbiol. 55:245-256.
7. Rice, C. A., M. L. Tuttle, and P. H. Briggs. 1988 Sulfur speciation, sulfur isotopy, and elemental analyses of water-column, pore water, and sediment samples from Soap Lake, Washington. USGS Open File Report 88-22. U.S. Geological Survey, Denver, CO.
8. Schäfer, H., and G. Muyzer. 2001. Denaturing gradient gel electrophoresis in marine microbial ecology. Methods Microbiol. 30:426-468.
9. Sorokin, D. Y., H. Banciu, M. van Loosdrecht, and J. G. Kuenen. 2003. Growth physiology and competitive interaction of obligately chemolithoautotrophic, haloalkaliphilic, sulfur-oxidizing bacteria from soda lakes. Extremophiles 7:195-203.
10. Sorokin, D. Y., V. M. Gorlenko, T. P. Tourova, T. V. Kolganova, A. I. Tsapin, K. H. Nealson, and J. G. Kuenen. 2002. Thioalkalimicrobium cyclicum sp. nov. and Thioalkalivibrio jannaschii sp. nov., new species of alkaliphilic, obligately chemolithoautotrophic sulfur-oxidizing bacteria from a hypersaline alkaline Mono Lake (California). Int. J. Syst. Evol. Microbiol. 52:913-920.
11. Sorokin, D. Y., and J. G. Kuenen. 2005. Haloalkaliphilic sulfur-oxidizing bacteria in soda lakes. FEMS Microbiol. Rev. 29:685-702.
12. Sorokin, D. Y., A. M. Lysenko, L. L. Mityushina, T. P. Tourova, B. E. Jones, F. A. Rainey, L. A. Robertson, and J. G. Kuenen. 2001. Thioalkalimicrobium sibiricum, Thioalkalimicrobium aerophilum gen. nov., sp. nov., and Thioalkalivibrio versutus, Thioalkalivibrio nitratis, Thioalkalivibrio denitrificans gen. nov., sp. nov., new obligately alkaliphilic and obligately chemolithoautotrophic sulfur-oxidizing bacteria from soda lakes. Int. J. Syst. Evol. Microbiol. 51:565-580.
13. Walker, K. F. 1975. The seasonal phytoplankton cycles of two saline cycles in central Washington. Limnol. Oceanogr. 20:211-224.