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Volumn 139, Issue 2, 2007, Pages 150-158

Laboratory evaluation of a quantitative real-time reverse transcription PCR assay for the detection and identification of the four subgroups of avian metapneumovirus

Author keywords

Avian metapneumovirus; Quantitation; Real Time RT PCR; Subgroup identification

Indexed keywords

ANTIGENIC VARIATION; ARTICLE; AVIAN PNEUMOVIRUS; CONTROLLED STUDY; EVALUATION; MOLECULAR BIOLOGY; NONHUMAN; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA VIRUS; VIRUS IDENTIFICATION; VIRUS STRAIN;

EID: 33846223148     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2006.09.022     Document Type: Article
Times cited : (31)

References (43)
  • 1
    • 12444303198 scopus 로고    scopus 로고
    • Nucleotide and predicted amino acid sequence-based analysis of the avian metapneumovirus type C cell attachment glycoprotein gene: phylogenetic analysis and molecular epidemiology of U.S. pneumoviruses
    • Alvarez R., Lwamba H.M., Kapczynski D.R., Njenga M.K., and Seal B.S. Nucleotide and predicted amino acid sequence-based analysis of the avian metapneumovirus type C cell attachment glycoprotein gene: phylogenetic analysis and molecular epidemiology of U.S. pneumoviruses. J. Clin. Microbiol. 41 (2003) 1730-1735
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 1730-1735
    • Alvarez, R.1    Lwamba, H.M.2    Kapczynski, D.R.3    Njenga, M.K.4    Seal, B.S.5
  • 2
    • 0033756513 scopus 로고    scopus 로고
    • Nucleotide sequences of the F, L and G protein genes of two non-A/non-B avian pneumoviruses (APV) reveal a novel APV subgroup
    • Bayon-Auboyer M.H., Arnauld C., Toquin D., and Eterradossi N. Nucleotide sequences of the F, L and G protein genes of two non-A/non-B avian pneumoviruses (APV) reveal a novel APV subgroup. J. Gen. Virol. 81 (2000) 2723-2733
    • (2000) J. Gen. Virol. , vol.81 , pp. 2723-2733
    • Bayon-Auboyer, M.H.1    Arnauld, C.2    Toquin, D.3    Eterradossi, N.4
  • 3
    • 0032788303 scopus 로고    scopus 로고
    • Comparison of F-, G- and N-based RT-PCR protocols with conventional virological procedures for the detection and typing of turkey rhinotracheitis virus
    • Bayon-Auboyer M.H., Jestin V., Toquin D., Cherbonnel M., and Eterradossi N. Comparison of F-, G- and N-based RT-PCR protocols with conventional virological procedures for the detection and typing of turkey rhinotracheitis virus. Arch. Virol. 144 (1999) 1091-1109
    • (1999) Arch. Virol. , vol.144 , pp. 1091-1109
    • Bayon-Auboyer, M.H.1    Jestin, V.2    Toquin, D.3    Cherbonnel, M.4    Eterradossi, N.5
  • 4
    • 0036816831 scopus 로고    scopus 로고
    • Detection of avian pneumovirus in wild Canada (Branta canadensis) and blue-winged teal (Anas discors) geese
    • Bennett R.S., McComb B., Shin H.J., Njenga M.K., Nagaraja K.V., and Halvorson D.A. Detection of avian pneumovirus in wild Canada (Branta canadensis) and blue-winged teal (Anas discors) geese. Avian Dis. 46 (2002) 1025-1029
    • (2002) Avian Dis. , vol.46 , pp. 1025-1029
    • Bennett, R.S.1    McComb, B.2    Shin, H.J.3    Njenga, M.K.4    Nagaraja, K.V.5    Halvorson, D.A.6
  • 5
    • 20444448829 scopus 로고    scopus 로고
    • Detection and quantification of hepatitis A virus in seawater via real-time RT-PCR
    • Brooks H.A., Gersberg R.M., and Dhar A.K. Detection and quantification of hepatitis A virus in seawater via real-time RT-PCR. J. Virol. Methods 127 (2005) 109-118
    • (2005) J. Virol. Methods , vol.127 , pp. 109-118
    • Brooks, H.A.1    Gersberg, R.M.2    Dhar, A.K.3
  • 6
    • 12344320226 scopus 로고    scopus 로고
    • Rapid differentiation of avian infectious bronchitis virus isolates by sample to residual ratio quantitation using real-time reverse transcriptase-polymerase chain reaction
    • Callison S.A., Hilt D.A., and Jackwood M.W. Rapid differentiation of avian infectious bronchitis virus isolates by sample to residual ratio quantitation using real-time reverse transcriptase-polymerase chain reaction. J. Virol. Methods 124 (2005) 183-190
    • (2005) J. Virol. Methods , vol.124 , pp. 183-190
    • Callison, S.A.1    Hilt, D.A.2    Jackwood, M.W.3
  • 7
    • 0033451505 scopus 로고    scopus 로고
    • Longitudinal field studies of infectious bronchitis virus and avian pneumovirus in broilers using type-specific polymerase chain reactions
    • Cavanagh D., Mawditt P., Britton C., and Naylor C.J. Longitudinal field studies of infectious bronchitis virus and avian pneumovirus in broilers using type-specific polymerase chain reactions. Avian Pathol. 28 (1999) 593-605
    • (1999) Avian Pathol. , vol.28 , pp. 593-605
    • Cavanagh, D.1    Mawditt, P.2    Britton, C.3    Naylor, C.J.4
  • 8
    • 8844225704 scopus 로고    scopus 로고
    • Design, validation, and absolute sensitivity of a novel test for the molecular detection of avian pneumovirus
    • Cecchinato M., Catelli E., Savage C.E., Jones R.C., and Naylor C.J. Design, validation, and absolute sensitivity of a novel test for the molecular detection of avian pneumovirus. J. Vet. Diagn. Invest. 16 (2004) 582-585
    • (2004) J. Vet. Diagn. Invest. , vol.16 , pp. 582-585
    • Cecchinato, M.1    Catelli, E.2    Savage, C.E.3    Jones, R.C.4    Naylor, C.J.5
  • 10
    • 0032421727 scopus 로고    scopus 로고
    • Genetic and antigenic analysis of the G attachment protein of bovine respiratory syncytial virus strains
    • Elvander M., Vilcek S., Baule C., Uttenthal A., Ballagi-Pordany A., and Belak S. Genetic and antigenic analysis of the G attachment protein of bovine respiratory syncytial virus strains. J. Gen. Virol. 79 (1998) 2939-2946
    • (1998) J. Gen. Virol. , vol.79 , pp. 2939-2946
    • Elvander, M.1    Vilcek, S.2    Baule, C.3    Uttenthal, A.4    Ballagi-Pordany, A.5    Belak, S.6
  • 11
    • 0029295799 scopus 로고
    • Evaluation of different turkey rhinotracheitis viruses used as antigens for serological testing following live vaccination and challenge
    • Eterradossi N., Toquin D., Guittet M., and Bennejean G. Evaluation of different turkey rhinotracheitis viruses used as antigens for serological testing following live vaccination and challenge. Zentralbl. Veterinarmed B 42 (1995) 175-186
    • (1995) Zentralbl. Veterinarmed B , vol.42 , pp. 175-186
    • Eterradossi, N.1    Toquin, D.2    Guittet, M.3    Bennejean, G.4
  • 12
    • 0002405709 scopus 로고
    • La rhinotrachéite infectieuse de la dinde: description et rôle d'un nouvel agent
    • Giraud P., Guittet M., Toquin D., and Bennejean G. La rhinotrachéite infectieuse de la dinde: description et rôle d'un nouvel agent. Rec. Med. Vet. 164 (1988) 39-44
    • (1988) Rec. Med. Vet. , vol.164 , pp. 39-44
    • Giraud, P.1    Guittet, M.2    Toquin, D.3    Bennejean, G.4
  • 13
    • 4243446267 scopus 로고
    • Utilisation de la méthode Elisa pour le sérodiagnostic de l'infection par le virus de la rhinotrachéite infectieuse chez la dinde, le poulet et la pintade
    • Giraud P., Toquin D., Picault J.P., Guittet M., L'Hospitalier R., Kles V., and Bennejean G. Utilisation de la méthode Elisa pour le sérodiagnostic de l'infection par le virus de la rhinotrachéite infectieuse chez la dinde, le poulet et la pintade. Bull. Lab. Vet. 27-28 (1987) 65-70
    • (1987) Bull. Lab. Vet. , vol.27-28 , pp. 65-70
    • Giraud, P.1    Toquin, D.2    Picault, J.P.3    Guittet, M.4    L'Hospitalier, R.5    Kles, V.6    Bennejean, G.7
  • 14
    • 11144340137 scopus 로고    scopus 로고
    • Avian pneumoviruses
    • Saif Y.M. (Ed), Iowa State University Press
    • Gough R.E. Avian pneumoviruses. In: Saif Y.M. (Ed). Diseases in Poultry (2003), Iowa State University Press 92-99
    • (2003) Diseases in Poultry , pp. 92-99
    • Gough, R.E.1
  • 15
    • 9944232528 scopus 로고    scopus 로고
    • Complete sequence of the G glycoprotein gene of avian metapneumovirus subgroup C and identification of a divergent domain in the predicted protein
    • Govindarajan D., Yunus A.S., and Samal S.K. Complete sequence of the G glycoprotein gene of avian metapneumovirus subgroup C and identification of a divergent domain in the predicted protein. J. Gen. Virol. 85 (2004) 3671-3675
    • (2004) J. Gen. Virol. , vol.85 , pp. 3671-3675
    • Govindarajan, D.1    Yunus, A.S.2    Samal, S.K.3
  • 16
    • 22144499241 scopus 로고    scopus 로고
    • Real-time RT-PCR detection of 12 respiratory viral infections in four triplex reactions
    • Gunson R.N., Collins T.C., and Carman W.F. Real-time RT-PCR detection of 12 respiratory viral infections in four triplex reactions. J. Clin. Virol. 33 (2005) 341-344
    • (2005) J. Clin. Virol. , vol.33 , pp. 341-344
    • Gunson, R.N.1    Collins, T.C.2    Carman, W.F.3
  • 17
    • 27744546068 scopus 로고    scopus 로고
    • Validation of a real-time RT-PCR assay for sensitive and specific detection of classical swine fever
    • Hoffmann B., Beer M., Schelp C., Schirrmeier H., and Depner K. Validation of a real-time RT-PCR assay for sensitive and specific detection of classical swine fever. J. Virol. Methods 130 (2005) 36-44
    • (2005) J. Virol. Methods , vol.130 , pp. 36-44
    • Hoffmann, B.1    Beer, M.2    Schelp, C.3    Schirrmeier, H.4    Depner, K.5
  • 18
    • 27744529987 scopus 로고    scopus 로고
    • Development of a real-time RT-PCR assay for detection and quantitation of parainfluenza virus 3
    • Hu A., Colella M., Zhao P., Li F., Tam J.S., Rappaport R., and Cheng S.-M. Development of a real-time RT-PCR assay for detection and quantitation of parainfluenza virus 3. J. Virol. Methods 130 (2005) 145-148
    • (2005) J. Virol. Methods , vol.130 , pp. 145-148
    • Hu, A.1    Colella, M.2    Zhao, P.3    Li, F.4    Tam, J.S.5    Rappaport, R.6    Cheng, S.-M.7
  • 19
    • 0023392666 scopus 로고
    • The G glycoprotein of human respiratory syncytial viruses of subgroups A and B: extensive sequence divergence between antigenically related proteins
    • Johnson P.R., Spriggs M.K., Olmsted R.A., and Collins P.L. The G glycoprotein of human respiratory syncytial viruses of subgroups A and B: extensive sequence divergence between antigenically related proteins. Proc. Natl. Acad. Sci. U.S.A. 84 (1987) 5625-5629
    • (1987) Proc. Natl. Acad. Sci. U.S.A. , vol.84 , pp. 5625-5629
    • Johnson, P.R.1    Spriggs, M.K.2    Olmsted, R.A.3    Collins, P.L.4
  • 20
    • 0027973914 scopus 로고
    • Extensive sequence variation in the attachment (G) protein gene of avian pneumovirus: evidence for two distinct subgroups
    • Juhasz K., and Easton A.J. Extensive sequence variation in the attachment (G) protein gene of avian pneumovirus: evidence for two distinct subgroups. J. Gen. Virol. 75 (1994) 2873-2880
    • (1994) J. Gen. Virol. , vol.75 , pp. 2873-2880
    • Juhasz, K.1    Easton, A.J.2
  • 21
    • 20444450075 scopus 로고    scopus 로고
    • Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR
    • Ko G., Jothikumar N., Hill V.R., and Sobsey M.D. Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR. J. Virol. Methods 127 (2005) 148-153
    • (2005) J. Virol. Methods , vol.127 , pp. 148-153
    • Ko, G.1    Jothikumar, N.2    Hill, V.R.3    Sobsey, M.D.4
  • 22
    • 33846257840 scopus 로고    scopus 로고
    • Lemiere, S., Sellal, E., Bouley, S., Toquin, D., Guionie, O., Eterradossi, N., 2005. Development of real time PCR for diagnosis of avian metapneumovirus (APV) infections. Proceedings of the 14th World Veterinary Poultry Congress, Istanbul, Turkey, 22-24 August 2005, p. 612.
  • 23
    • 0026662050 scopus 로고
    • Sequence analysis of the 22K, SH and G genes of turkey rhinotracheitis virus and their intergenic regions reveals a gene order different from that of other pneumoviruses
    • Ling R., Easton A.J., and Pringle C.R. Sequence analysis of the 22K, SH and G genes of turkey rhinotracheitis virus and their intergenic regions reveals a gene order different from that of other pneumoviruses. J. Gen. Virol. 73 (1992) 1709-1715
    • (1992) J. Gen. Virol. , vol.73 , pp. 1709-1715
    • Ling, R.1    Easton, A.J.2    Pringle, C.R.3
  • 24
    • 9644268249 scopus 로고    scopus 로고
    • Comparison of the full-length genome sequence of avian metapneumovirus subtype C with other paramyxoviruses
    • Lwamba H.C., Alvarez R., Wise M.G., Yu Q., Halvorson D., Njenga M.K., and Seal B.S. Comparison of the full-length genome sequence of avian metapneumovirus subtype C with other paramyxoviruses. Virus Res. 107 (2005) 83-92
    • (2005) Virus Res. , vol.107 , pp. 83-92
    • Lwamba, H.C.1    Alvarez, R.2    Wise, M.G.3    Yu, Q.4    Halvorson, D.5    Njenga, M.K.6    Seal, B.S.7
  • 26
    • 2442425473 scopus 로고    scopus 로고
    • Detection of three avian respiratory viruses by single-tube multiplex reverse transcription-polymerase chain reaction assay
    • Malik Y.S., Patnayak D.P., and Goyal S.M. Detection of three avian respiratory viruses by single-tube multiplex reverse transcription-polymerase chain reaction assay. J. Vet. Diagn. Invest. 16 (2004) 244-248
    • (2004) J. Vet. Diagn. Invest. , vol.16 , pp. 244-248
    • Malik, Y.S.1    Patnayak, D.P.2    Goyal, S.M.3
  • 27
    • 0023198149 scopus 로고
    • Subgroup characteristics of respiratory syncytial virus strains recovered from children with two consecutive infections
    • Mufson M.A., Belshe R.B., Orvell C., and Norrby E. Subgroup characteristics of respiratory syncytial virus strains recovered from children with two consecutive infections. J. Clin. Microbiol. 25 (1987) 1535-1539
    • (1987) J. Clin. Microbiol. , vol.25 , pp. 1535-1539
    • Mufson, M.A.1    Belshe, R.B.2    Orvell, C.3    Norrby, E.4
  • 28
    • 0031431568 scopus 로고    scopus 로고
    • Appearance of type B avian pneumovirus in Great Britain
    • Naylor C.J., Shaw K., Britton P., and Cavanagh D. Appearance of type B avian pneumovirus in Great Britain. Avian Pathol. 26 (1997) 327-338
    • (1997) Avian Pathol. , vol.26 , pp. 327-338
    • Naylor, C.J.1    Shaw, K.2    Britton, P.3    Cavanagh, D.4
  • 29
    • 1642347819 scopus 로고    scopus 로고
    • Sequence polymorphism of the predicted human metapneumovirus G glycoprotein
    • Peret T.C., Abed Y., Anderson L.J., Erdman D.D., and Boivin G. Sequence polymorphism of the predicted human metapneumovirus G glycoprotein. J. Gen. Virol. 85 (2004) 679-686
    • (2004) J. Gen. Virol. , vol.85 , pp. 679-686
    • Peret, T.C.1    Abed, Y.2    Anderson, L.J.3    Erdman, D.D.4    Boivin, G.5
  • 30
    • 18944372386 scopus 로고    scopus 로고
    • Real-time RT-PCR differentiation and quantitation of infectious bursal disease virus strains using dual-labeled fluorescent probes
    • Peters M.A., Lin T.L., and Wu C.C. Real-time RT-PCR differentiation and quantitation of infectious bursal disease virus strains using dual-labeled fluorescent probes. J. Virol. Methods 127 (2005) 87-95
    • (2005) J. Virol. Methods , vol.127 , pp. 87-95
    • Peters, M.A.1    Lin, T.L.2    Wu, C.C.3
  • 31
    • 33745158157 scopus 로고
    • A simple method of estimating 50 percent end points
    • Reed L.J., and Muench H. A simple method of estimating 50 percent end points. Am. J. Hyg. 27 (1938) 493-497
    • (1938) Am. J. Hyg. , vol.27 , pp. 493-497
    • Reed, L.J.1    Muench, H.2
  • 33
    • 0034458744 scopus 로고    scopus 로고
    • Avian pneumovirus (APV) RNA from wild and sentinel birds in the United States has genetic homology with RNA from APV isolates from domestic turkeys
    • Shin H.J., Njenga M.K., McComb B., Halvorson D.A., and Nagaraja K.V. Avian pneumovirus (APV) RNA from wild and sentinel birds in the United States has genetic homology with RNA from APV isolates from domestic turkeys. J. Clin. Microbiol. 38 (2000) 4282-4284
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 4282-4284
    • Shin, H.J.1    Njenga, M.K.2    McComb, B.3    Halvorson, D.A.4    Nagaraja, K.V.5
  • 35
    • 0034487710 scopus 로고    scopus 로고
    • Lack of antigenic relationship between French and recent North American non-A/non-B turkey rhinotracheitis viruses
    • Toquin D., Bayon-Auboyer M.H., Senne D.A., and Eterradossi N. Lack of antigenic relationship between French and recent North American non-A/non-B turkey rhinotracheitis viruses. Avian Dis. 44 (2000) 977-982
    • (2000) Avian Dis. , vol.44 , pp. 977-982
    • Toquin, D.1    Bayon-Auboyer, M.H.2    Senne, D.A.3    Eterradossi, N.4
  • 36
    • 0043169517 scopus 로고    scopus 로고
    • Subgroup C avian metapneumovirus (MPV) and the recently isolated human MPV exhibit a common organization but have extensive sequence divergence in their putative SH and G genes
    • Toquin D., de Boisseson C., Beven V., Senne D.A., and Eterradossi N. Subgroup C avian metapneumovirus (MPV) and the recently isolated human MPV exhibit a common organization but have extensive sequence divergence in their putative SH and G genes. J. Gen. Virol. 84 (2003) 2169-2178
    • (2003) J. Gen. Virol. , vol.84 , pp. 2169-2178
    • Toquin, D.1    de Boisseson, C.2    Beven, V.3    Senne, D.A.4    Eterradossi, N.5
  • 37
    • 0029977053 scopus 로고    scopus 로고
    • Use of a related ELISA antigen for efficient TRT serological testing following live vaccination
    • Toquin D., Eterradossi N., and Guittet M. Use of a related ELISA antigen for efficient TRT serological testing following live vaccination. Vet. Rec. 139 (1996) 71-72
    • (1996) Vet. Rec. , vol.139 , pp. 71-72
    • Toquin, D.1    Eterradossi, N.2    Guittet, M.3
  • 38
    • 33644816717 scopus 로고    scopus 로고
    • European and American subgroup C isolates of avian metapneumovirus belong to different genetic lineages
    • Toquin D., Guionie O., Jestin V., Zwingelstein F., Allee C., and Eterradossi N. European and American subgroup C isolates of avian metapneumovirus belong to different genetic lineages. Virus Genes 32 (2006) 97-103
    • (2006) Virus Genes , vol.32 , pp. 97-103
    • Toquin, D.1    Guionie, O.2    Jestin, V.3    Zwingelstein, F.4    Allee, C.5    Eterradossi, N.6
  • 42
    • 0023661534 scopus 로고
    • Antibodies to TRT in chickens with swollen head syndrome
    • Wyeth P.J., Chettle N.J., Gough R.E., and Collins M.S. Antibodies to TRT in chickens with swollen head syndrome. Vet. Rec. 120 (1987) 286-287
    • (1987) Vet. Rec. , vol.120 , pp. 286-287
    • Wyeth, P.J.1    Chettle, N.J.2    Gough, R.E.3    Collins, M.S.4
  • 43
    • 0026583731 scopus 로고
    • Cloning and sequencing of the matrix protein (M) gene of turkey rhinotracheitis virus reveal a gene order different from that of respiratory syncytial virus
    • Yu Q., Davis P.J., Li J., and Cavanagh D. Cloning and sequencing of the matrix protein (M) gene of turkey rhinotracheitis virus reveal a gene order different from that of respiratory syncytial virus. Virology 186 (1992) 426-434
    • (1992) Virology , vol.186 , pp. 426-434
    • Yu, Q.1    Davis, P.J.2    Li, J.3    Cavanagh, D.4


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