Major histocompatibility complex class IIB allele polymorphism and its association with resistance/susceptibility to Vibrio anguillarum in Japanese flounder (Paralichthys olivaceus)

Marine Biotechnology

Volumn 8, Issue 6, 2006, Pages 600-610

  Zhang, Y X ^a,b   Chen, S L ^a   Liu, Y G ^a   Sha, Z X ^a   Liu, Z J ^c  

^a YELLOW SEA FISHERIES RESEARCH INSTITUTE   (China)

^b OCEAN UNIVERSITY OF CHINA   (China)

^c AUBURN UNIVERSITY   (United States)

Author keywords

cDNA; Disease resistance; Disease susceptibility; Japanese flounder; Major histocompatibility complex class IIB (MHC IIB); Paralichthys olivaceus; Polymorphism

Indexed keywords

DISEASE RESISTANCE; DISEASE SUSCEPTIBILITY; JAPANESE FLOUNDER; MAJOR HISTOCOMPATIBILITY COMPLEX CLASS IIB (MHC IIB); PARALICHTHYS OLIVACEUS; POLYMORPHISM;

AMINO ACIDS; BIODIVERSITY; DISEASES; DNA; ENZYMES; REACTION KINETICS;

GENES;

FISH PROTEIN;

ALLELE; CLONE; DISEASE RESISTANCE; FLATFISH; MAJOR HISTOCOMPATIBILITY COMPLEX; PHYLOGENETICS; POLYMORPHISM;

ALLELE; AMINO ACID SEQUENCE; ANIMAL; ANIMAL DISEASE; ARTICLE; CHEMISTRY; FISH DISEASE; FLOUNDER; GENE; GENETIC POLYMORPHISM; GENETIC PREDISPOSITION; GENETICS; GRAM NEGATIVE INFECTION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY;

ALLELES; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; FISH DISEASES; FISH PROTEINS; FLOUNDER; GENES, MHC CLASS II; GENETIC PREDISPOSITION TO DISEASE; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMORPHISM, GENETIC; VIBRIO INFECTIONS;

LISTONELLA ANGUILLARUM; PARALICHTHYS OLIVACEUS; PLEURONECTOIDEI;

EID: 33846192820     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-005-6185-8     Document Type: Article

References (53)

1. H Acha-Orbea L Scarpellino 1991 Nonobese diabetic and nonobese nondiabetic mice have unique MHC class II haplotypes Immunogenetics 34 57 59
2. V Apanius D Penn PR Slev LR Ruff WK Potts 1997 The nature of selection on the major histocompatibility complex Rev Immunol 17 179 224
3. S Bartl IL Weissman 1994 Isolation and characterization of major histocompatibility complex class II B genes from the nurse shark Proc Natl Acad Sci USA 91 262 266
4. T Binz C Largiader R Müller C Wedekind 2001 Sequence diversity of Mhc genes in lake whitefish J Fish Biol 58 359 373
5. WE Briles RW Briles RE Taffs HA Stone 1983 Resistance to a malignant lymphoma in chickens is mapped to subregion of major histocompatibility (B) complex Science 219 977 979
6. SL Chen MY Xu SN Hu L Li 2004a Analysis of immune-relevant genes expressed in red sea bream (Chrysophrys major) spleen Aquaculture 240 115 130
7. SL Chen MY Xu XS Ji GC Yu 2004b Cloning and characterization of natural resistance associated macrophage protein (Nramp) cDNA from red sea bream (Pagrus major) Fish Shellfish Immunol 17 305 313
8. SL Chen YX Zhang MY Xu XS Ji GC Yu CF Dong 2006 Molecular polymorphism and expression analysis of MHC II B gene from red sea bream (Chrysophrys major) Dev Comp Immunol 30 407 418
9. B Dixon LAJ Nagelkerke E Sibbing RJM Stet 1996 Evolution of MHC class II β chain-encoding genes in the Lake Tana barbell species flock (Barbus intermedius complex) Immunogenetics 44 6 419 431
10. S Edwards PW Hedrick 1998 Evolution and ecology of MHC molecules: from genomics to sexual selection Trends Ecol Evol 13 305 311
11. F Figueroa WE Mayer H Sultmann C O'hUigin H Tichy Y Satta N Takezaki N Takahata J Klein 2000 MHC class II B gene evolution in East African cichlid fishes Immunogenetics 51 556 575
12. MF Flajnik C Canel J Kramer M Kasahara 1991 Evolution of the major histocompatibility complex: molecular cloning of major histocompatibility complex class I from the amphibian Xenopus Proc Natl Acad Sci USA 88 537 541
13. T Gjedrem R Salte HM Gjoen 1991 Genetic variation in susceptibility of Atlantic salmon to furunculosis Aquaculture 97 1 6
14. J Glamann 1995 Complete coding sequence of rainbow trout Mhc II beta chain Scand J Immunol 41 365 372
15. UB Godwin A Antao MR Wilson VG Chinchar NW Miller 1997 MHC class II β genes in the channel catfish (Icatalurus punctatus) Dev Comp Immunol 21 13 23
16. U Grimholt I Olsaker CV Lindstrom O Lie 1994 A study of variability in the MHC class II β1 and class I α2 domain exons of Atlantic salmon (Salmo salar) Anim Genet 25 147 153
17. U Grimholt S Larsen R Nordmo P Midtlyng S Kjoeglum A Storset S Saebo RJ Stet 2003 MHC polymorphism and disease resistance in Atlantic salmon (Salmo salar); facing pathogens with single expressed major histocompatibility class I and class II loci Immunogenetics 55 210 219
18. D Grossberger P Parham 1992 Reptilian class I major histocompatibility complex genes reveal conserved elements in class I structure Immunogenetics 36 166 174
19. PW Hedrick TJ Kim 1999 Genetics of complex polymorphisms: parasites and maintenance of MHC variation RS Singh CK Krimbas Evolutionary Genetics from Molecules to Morphology Cambridge University Press New York
20. AVS Hill CEM Allsopp D Kwiatkowski 1991 Common West African HLA antigens associated with protection from severe malaria Nature 352 595 600
21. AR Hoelzel JC Stephens SJ O'Brien 1999 Molecular genetic diversity and evolution at the MHC DQB locus in four species of pinnipeds Mol Biol Evol 16 611 618
22. I Hordvik U Grimholt VM Fosse Ø Lie C Endresen 1994 Cloning and sequence analysis of cDNA encoding the MHC class II β chain in Atlantic salmon (Salmo salar) Immunogenetics 37 437 441
23. AL Hughes 2000 Evolution of introns and exons of class II major histocompatibility complex genes of vertebrates Immunogenetics 51 473 486
24. D Klein H Ono C O'hUigin V Vincek T Goldschmidt J Klein 1993 Extensive MHC variability in cichlid fishes of Lake Malawi Nature 364 330 334
25. J Klein 1986 Natural History of the Major Histocompatibility Complex John Wiley & Sons New York
26. CP Kruiswijk TT Hermsen AH Westphal HFJ Savelkoul RJM Stet 2002 A novel functional class I lineage in zebrafish (Danio rerio), carp (Cyprinus carpio), and large barbus (Barbus ingtermedius) showing an unusual conservation of the peptide binding domains J Immunol 169 1936 1947
27. S Kumar K Tamura I Jakobsen M Nei 2001 MEGA2.0: Molecular evolutionary genetics analysis software Bioinformatics 17 1244 1245
28. A Langefors J Lohm T Von Schantz 2001 Allelic polymorphism in MHC class II β in four populations of Atlantic salmon (Salmo salar) Immunogenetics 53 329 336
29. Å Langefors J Lohm M Grahn O Andersen T von Schantz 2001 Association between Mhc class II B alleles and resistance to Aeromonas salmonicida in Atlantic salmon Proc R Soc Lond B 268 479 485
30. Y Liu M Kasahara LL Rumfelt MF Flajnik 2002 Xenopus class II a genes: studies if genetics, polymorphism, and expression Dev Comp. Immunol 26 735 750
31. YG Liu SL Chen BF Li 2005 Assessing the genetic structure of three Japanese flounder (Paralichthys olivaceus) stocks by microsatellite markers Aquaculture 243 103 111
32. J Lohm M Grahn A Langefors O Andersen A Storset T von Schantz 2002 Experimental evidence for major histocompatibility complex-allele-specific resistance to a bacterial infection Proc Biol Sci 269 2029 2033
33. E Medina RJ North 1998 Resistance ranking of some common inbred mouse strains to Mycobacterium tuberculosis and relationship to major histocompatibility complex haplotype and Nramp1 genotype Immunology 93 270 274
34. MM Miller R Goto A Bernot R Zoorob C Auffray N Bumstead WE Briles 1994 Two Mhc class I and two Mhc class II genes map to the chicken Rfp-y system outside the B complex Proc Natl Acad Sci USA 91 4397 4401
35. YK Ohta EC Okamura S [tmp] McKinney BK Hashimoto MF Flajnik 2000 Primitive synteny of vertebrate major histocompatibility complex class I and class II genes Proc Natl Acad Sci USA 97 9 4712 4717
36. H Ono D Klein V Vincek F Figueroa C O'hUigin H Tichy J Klein 1992 Major histocompatibility complex class II genes of zebrafish Proc Natl Acad Sci USA 89 11886 11890
37. RA Padgett PJ Grabowski MM Konarska S Seiler PA Sharp 1986 Splicing of messenger RNA precursors Annu Rev Biochem 55 1119 1150
38. Y Palti MN Krista KI Waller JE Parsons GH Thorgaard 2001 Association between DNA polymorphisms tightly linked to MHC class II genes and IHV virus resistance in backcrosses of rainbow and cutthroat trout Aquaculture 194 283 289
39. P Parham T Ohta 1996 Population biology of antigen presentation by MHC class I molecules Science 272 67 74
40. S Paterson K Wilson JM Pemberton 1998 Major histocompatibility complex variation associated with juvenile survival and parasite resistance in a large unmanaged ungulate population Proc Natl Acad Sci USA 95 3714 3719
41. O Pedro HFV Houria CZ Sophie 2003 Associations of MHC ancestral haplotypes with resistance/susceptibility to AIDS disease development J Immunol 170 1925 1929
42. SS Ristow LD Grabowski SM Thompson GW Warr SL Kaattari JM de Avila GH Thorgaard 1999 Coding sequences of the MHC class II β chain of homozygous rainbow trout (Oncorhynchus mykiss) Dev Comp Immunol 23 51 60
43. JB Rothbard ML Gefter 1991 Interactions between immunogenetic peptides and Mhc proteins Annu Rev Immunol 9 527 565
44. P Srisapoome T Ohira I Hirono T Aoki 2004 Cloning, characterization and expression of cDNA containing major histocompatibility complex class II α and II β genes of Japanese flounder Paralichthys olivaceus Fish Sci 70 264
45. RJM Stet CP Kruiswijk JP Saeij GF Wiegertjes 1998 Major histocompatibility genes in cyprinid fishes: theory and practice Immunol. Rev 166 301 316
46. H Sültmann W Mayer F Figueroa C O'Huigin J Klein 1994 Organization of Mhc class II B genes in the zebrafish (Brachydanio rerio) Genomics 23 1 14
47. JD Thompson DG Higgins TJ Gibson 1994 Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions- specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680
48. J Trowsdale 1995 Both man and bird and beast: comparative organization of MHC genes Immunogenetics 41 1 17
49. SHM Van Erp E Egberts RJ Stet 1996 Characterization of class II A and B genes in a gynogenetic carp clone Immunogenetics 44 192 202
50. RB Walker TJ [tmp] McConnell RA Walker 1994 Variability in an MHC Mosa class II beta chain-encoding gene in striped bass (Morone saxatilis) Dev Comp Immunol 18 325 342
51. H Wittzell T Madsen H Westerdahl R Shine T Von Schantz 1999 MHC variations in birds and reptiles Genetics 104 301 309
52. Wynne J, Cook MT, Barbara FN, Nicholas GE (2004) Polymorphism within MHC genes associated with resistance and susceptibility to amoebic gill disease (AGD) in Atlantic salmon Salmo salar. Australian aquaculture posters presented by CSIRO scientists.
53. Zhang YX, Chen SL (2006) Molecular identification, polymorphism and expression analysis of major histocompatibility complex class II A and B genes of turbot (Scophthalmus maximus). Marine Biotechnol, DOI: 10.1007/s10126-005- 6174-y