메뉴 건너뛰기




Volumn 11, Issue 1, 2007, Pages 179-189

Denaturation of an extremely stable hyperthermophilic protein occurs via a dimeric intermediate

Author keywords

Glucosidase; Archaea; CelB; Determinants of stability; Hyperthermophile; Oligomerization; Pyrococcus furiosus; Tetramer

Indexed keywords

ARCHAEAL PROTEIN; BETA GLUCOSIDASE; GUANIDINE; PROTEIN SUBUNIT; RECOMBINANT PROTEIN; UREA;

EID: 33846176929     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-006-0030-5     Document Type: Article
Times cited : (8)

References (35)
  • 1
    • 0032404525 scopus 로고    scopus 로고
    • Finding and using hyperthermophilic enzymes
    • Adams MW, Kelly RM (1998) Finding and using hyperthermophilic enzymes. Trends Biotechnol 16:329-332
    • (1998) Trends Biotechnol , vol.16 , pp. 329-332
    • Adams, M.W.1    Kelly, R.M.2
  • 2
    • 0033580635 scopus 로고    scopus 로고
    • Thermodynamic analysis of unfolding and dissociation in lactose repressor protein
    • Barry JK, Matthews KS (1999) Thermodynamic analysis of unfolding and dissociation in lactose repressor protein. Biochemistry 38:6520-6528
    • (1999) Biochemistry , vol.38 , pp. 6520-6528
    • Barry, J.K.1    Matthews, K.S.2
  • 3
    • 0029846517 scopus 로고    scopus 로고
    • Comparison of a beta-glucosidase and a beta-mannosidase from the hyperthermophilic archaeon Pyrococcus furiosus. Purification, characterization, gene cloning, and sequence analysis
    • Bauer MW, Bylina EJ, Swanson RV, Kelly RM (1996) Comparison of a beta-glucosidase and a beta-mannosidase from the hyperthermophilic archaeon Pyrococcus furiosus. Purification, characterization, gene cloning, and sequence analysis. J Biol Chem 271: 23749-23755
    • (1996) J Biol Chem , vol.271 , pp. 23749-23755
    • Bauer, M.W.1    Bylina, E.J.2    Swanson, R.V.3    Kelly, R.M.4
  • 4
    • 0031925343 scopus 로고    scopus 로고
    • Glycosyl hydrolases from hyperthermophilic microorganisms
    • Bauer MW, Driskill LE, Kelly RM (1998) Glycosyl hydrolases from hyperthermophilic microorganisms. Curr Opin Biotechnol 9:141-145
    • (1998) Curr Opin Biotechnol , vol.9 , pp. 141-145
    • Bauer, M.W.1    Driskill, L.E.2    Kelly, R.M.3
  • 5
    • 0037161301 scopus 로고    scopus 로고
    • Characterization of the protrimer intermediate in the folding pathway of the interdigitated beta-helix tailspike protein
    • Benton CB, King J, Clark PL (2002) Characterization of the protrimer intermediate in the folding pathway of the interdigitated beta-helix tailspike protein. Biochemistry 41:5093-5103
    • (2002) Biochemistry , vol.41 , pp. 5093-5103
    • Benton, C.B.1    King, J.2    Clark, P.L.3
  • 6
    • 0032514775 scopus 로고    scopus 로고
    • Guanidine-induced denaturation of beta-glycosidase from Sulfolobus solfataricus expressed in Escherichia coli
    • Catanzano F, Graziano G, De Paola B, Barone G, D'Auria S, Rossi M, Nucci R (1998) Guanidine-induced denaturation of beta-glycosidase from Sulfolobus solfataricus expressed in Escherichia coli. Biochemistry 37:14484-14490
    • (1998) Biochemistry , vol.37 , pp. 14484-14490
    • Catanzano, F.1    Graziano, G.2    De Paola, B.3    Barone, G.4    D'Auria, S.5    Rossi, M.6    Nucci, R.7
  • 7
    • 33745699127 scopus 로고    scopus 로고
    • Over-expression and characterization of the recombinant small heat shock protein from Pyrococcus furiosus
    • Chen H, Chu Z, Zhang Y, Yang S (2006) Over-expression and characterization of the recombinant small heat shock protein from Pyrococcus furiosus. Biotechnol Lett 28:1089-1094
    • (2006) Biotechnol Lett , vol.28 , pp. 1089-1094
    • Chen, H.1    Chu, Z.2    Zhang, Y.3    Yang, S.4
  • 8
    • 0037424370 scopus 로고    scopus 로고
    • Activity-stability relationships in extremophilic enzymes
    • D'Amico S, Marx JC, Gerday C, Feller G (2003) Activity-stability relationships in extremophilic enzymes. J Biol Chem 278: 7891-7896
    • (2003) J Biol Chem , vol.278 , pp. 7891-7896
    • D'Amico, S.1    Marx, J.C.2    Gerday, C.3    Feller, G.4
  • 10
    • 0027958069 scopus 로고
    • The use of fluorescence methods to monitor unfolding transitions of proteins
    • Eftink MR (1994) The use of fluorescence methods to monitor unfolding transitions of proteins. Biophys J 66:482-501
    • (1994) Biophys J , vol.66 , pp. 482-501
    • Eftink, M.R.1
  • 11
    • 0033528657 scopus 로고    scopus 로고
    • Thermodynamic stability of a cold-active alpha-amylase from the Antarctic bacterium Alteromonas haloplanctis
    • Feller G, d'Amico D, Gerday C (1999) Thermodynamic stability of a cold-active alpha-amylase from the Antarctic bacterium Alteromonas haloplanctis. Biochemistry 38:4613-4619
    • (1999) Biochemistry , vol.38 , pp. 4613-4619
    • Feller, G.1    d'Amico, D.2    Gerday, C.3
  • 12
    • 0001522673 scopus 로고
    • Starch-gel electrophoresis-application to the classification of pituitary proteins and polypeptides
    • Ferguson KA (1964) Starch-gel electrophoresis-application to the classification of pituitary proteins and polypeptides. Metabolism 13 (Suppl):985-1002
    • (1964) Metabolism , vol.13 , Issue.SUPPL. , pp. 985-1002
    • Ferguson, K.A.1
  • 13
    • 0022445886 scopus 로고
    • Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100°C
    • Fiala G, Stetter Karl O (1986) Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100°C. Arch Microbiol 145:56-61
    • (1986) Arch Microbiol , vol.145 , pp. 56-61
    • Fiala, G.1    Stetter Karl, O.2
  • 14
    • 4243577223 scopus 로고
    • Cyanate formation in solutions of urea. II. Effect of urea on the eye lens protein-crystallin
    • Gerding JJ, Koppers A, Hagel P, Bloemendal H (1971) Cyanate formation in solutions of urea. II. Effect of urea on the eye lens protein-crystallin. Biochim Biophys Acta 243:375-379
    • (1971) Biochim Biophys Acta , vol.243 , pp. 375-379
    • Gerding, J.J.1    Koppers, A.2    Hagel, P.3    Bloemendal, H.4
  • 15
    • 0035842078 scopus 로고    scopus 로고
    • Analysis of equilibrium dissociation and unfolding in denaturants of soybean agglutinin and two of its derivatives
    • Ghosh M, Mandal DK (2001) Analysis of equilibrium dissociation and unfolding in denaturants of soybean agglutinin and two of its derivatives. Int J Biol Macromol 29:273-280
    • (2001) Int J Biol Macromol , vol.29 , pp. 273-280
    • Ghosh, M.1    Mandal, D.K.2
  • 16
    • 0030711517 scopus 로고    scopus 로고
    • Organophosphorus hydrolase is a remarkably stable enzyme that unfolds through a homodimeric intermediate
    • Grimsley JK, Scholtz JM, Pace CN, Wild JR (1997) Organophosphorus hydrolase is a remarkably stable enzyme that unfolds through a homodimeric intermediate. Biochemistry 36:14366-14374
    • (1997) Biochemistry , vol.36 , pp. 14366-14374
    • Grimsley, J.K.1    Scholtz, J.M.2    Pace, C.N.3    Wild, J.R.4
  • 17
    • 0030820880 scopus 로고    scopus 로고
    • High-temperature sodium dodecyl sulfate polyacrylamide gel electrophoresis
    • Haeberle JR (1997) High-temperature sodium dodecyl sulfate polyacrylamide gel electrophoresis. Biotechniques 23:638-640
    • (1997) Biotechniques , vol.23 , pp. 638-640
    • Haeberle, J.R.1
  • 18
    • 0001232852 scopus 로고
    • One-dimensional polyacrylamide gel electrophoresis
    • Rickwood BD, Ha D eds, Oxford University Press, Oxford, pp
    • Hames D (1990) One-dimensional polyacrylamide gel electrophoresis. In: Rickwood BD, Ha D (eds) Gel electrophoresis of proteins: a practical approach. Oxford University Press, Oxford, pp 1-147
    • (1990) Gel electrophoresis of proteins: A practical approach , pp. 1-147
    • Hames, D.1
  • 19
    • 0037137182 scopus 로고    scopus 로고
    • From two-state to three-state: The effect of the P61A mutation on the dynamics and stability of the factor for inversion stimulation results in an altered equilibrium denaturation mechanism
    • Hobart SA, Meinhold DW, Osuna R, Colon W (2002) From two-state to three-state: the effect of the P61A mutation on the dynamics and stability of the factor for inversion stimulation results in an altered equilibrium denaturation mechanism. Biochemistry 41:13744-13754
    • (2002) Biochemistry , vol.41 , pp. 13744-13754
    • Hobart, S.A.1    Meinhold, D.W.2    Osuna, R.3    Colon, W.4
  • 20
    • 0040776974 scopus 로고    scopus 로고
    • Comparative structural analysis and substrate specificity engineering of the hyperthermostable beta-glucosidase CelB from Pyrococcus furiosus
    • Kaper T, Lebbink JH, Pouwels J, Kopp J, Schulz GE, van der Oost J, de Vos WM (2000) Comparative structural analysis and substrate specificity engineering of the hyperthermostable beta-glucosidase CelB from Pyrococcus furiosus. Biochemistry 39:4963-4970
    • (2000) Biochemistry , vol.39 , pp. 4963-4970
    • Kaper, T.1    Lebbink, J.H.2    Pouwels, J.3    Kopp, J.4    Schulz, G.E.5    van der Oost, J.6    de Vos, W.M.7
  • 21
    • 0027465230 scopus 로고
    • Purification and characterization of an extremely thermostable beta-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus
    • Kengen SW, Luesink EJ, Stams AJ, Zehnder AJ (1993) Purification and characterization of an extremely thermostable beta-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus. Eur J Biochem 213:305-312
    • (1993) Eur J Biochem , vol.213 , pp. 305-312
    • Kengen, S.W.1    Luesink, E.J.2    Stams, A.J.3    Zehnder, A.J.4
  • 22
    • 27644518695 scopus 로고    scopus 로고
    • Conformational studies of a hyperthermostable enzyme
    • Koutsopoulos S, van der Oost J, Norde W (2005) Conformational studies of a hyperthermostable enzyme. FEBS J 272:5484-5496
    • (2005) FEBS J , vol.272 , pp. 5484-5496
    • Koutsopoulos, S.1    van der Oost, J.2    Norde, W.3
  • 23
    • 0034667871 scopus 로고    scopus 로고
    • How to measure and analyze tryptophan fluorescence in membranes properly, and why bother?
    • Ladokhin AS, Jayasinghe, Sajith, White Stephen H. (2000) How to measure and analyze tryptophan fluorescence in membranes properly, and why bother? Anal Biochem 285:235-245
    • (2000) Anal Biochem , vol.285 , pp. 235-245
    • Ladokhin, A.S.1    Jayasinghe, S.2    White Stephen, H.3
  • 24
    • 33745272829 scopus 로고    scopus 로고
    • Production and characterization of a thermostable L-threonine dehydrogenase from the hyperthermophilic archaeon Pyrococcus furiosus
    • Machielsen R, van der Oost J (2006) Production and characterization of a thermostable L-threonine dehydrogenase from the hyperthermophilic archaeon Pyrococcus furiosus. FEBS J 273:2722-2729
    • (2006) FEBS J , vol.273 , pp. 2722-2729
    • Machielsen, R.1    van der Oost, J.2
  • 25
    • 0036708002 scopus 로고    scopus 로고
    • Crystal structures and enzymatic properties of three formyltransferases from archaea: Environmental adaptation and evolutionary relationship
    • Mamat B, Roth A, Grimm C, Ermler U, Tziatzios C, Schubert D, Thauer RK, Shima S (2002) Crystal structures and enzymatic properties of three formyltransferases from archaea: environmental adaptation and evolutionary relationship. Protein Sci 11:2168-2178
    • (2002) Protein Sci , vol.11 , pp. 2168-2178
    • Mamat, B.1    Roth, A.2    Grimm, C.3    Ermler, U.4    Tziatzios, C.5    Schubert, D.6    Thauer, R.K.7    Shima, S.8
  • 26
    • 0000169232 scopus 로고
    • An algorithm for least squares estimation of non-linear parameters
    • Marquardt DW (1963) An algorithm for least squares estimation of non-linear parameters. J Appl Math 11:431-441
    • (1963) J Appl Math , vol.11 , pp. 431-441
    • Marquardt, D.W.1
  • 27
    • 0037646407 scopus 로고    scopus 로고
    • Stimulated interaction between and subunits of tryptophan synthase from hyperthermophile enhances its thermal stability
    • Ogasahara K, Ishida M, Yutani K (2003) Stimulated interaction between and subunits of tryptophan synthase from hyperthermophile enhances its thermal stability. J Biol Chem 278:8922-8928
    • (2003) J Biol Chem , vol.278 , pp. 8922-8928
    • Ogasahara, K.1    Ishida, M.2    Yutani, K.3
  • 28
    • 0022555885 scopus 로고
    • Determination and analysis of urea and guanidine hydrochloride denaturation curves
    • Pace CN (1986) Determination and analysis of urea and guanidine hydrochloride denaturation curves. Methods Enzymol 131:266-280
    • (1986) Methods Enzymol , vol.131 , pp. 266-280
    • Pace, C.N.1
  • 30
    • 0037200928 scopus 로고    scopus 로고
    • Overexpression of an archaeal protein in yeast: Secretion bottleneck at the ER
    • Smith JD, Robinson AS (2002) Overexpression of an archaeal protein in yeast: secretion bottleneck at the ER. Biotechnol Bioeng 79:713-723
    • (2002) Biotechnol Bioeng , vol.79 , pp. 713-723
    • Smith, J.D.1    Robinson, A.S.2
  • 31
    • 33645999932 scopus 로고    scopus 로고
    • A highly thermostable ferritin from the hyperthermophilic archaeal anaerobe Pyrococcus furiosus
    • Tatur J, Hagedoorn PL, Overeijnder ML, Hagen WR (2006) A highly thermostable ferritin from the hyperthermophilic archaeal anaerobe Pyrococcus furiosus. Extremophiles 10:139-148
    • (2006) Extremophiles , vol.10 , pp. 139-148
    • Tatur, J.1    Hagedoorn, P.L.2    Overeijnder, M.L.3    Hagen, W.R.4
  • 32
    • 0027104286 scopus 로고
    • Equilibrium denaturation studies of mouse beta-nerve growth factor
    • Timm DE, Neet KE (1992) Equilibrium denaturation studies of mouse beta-nerve growth factor. Protein Sci 1:236-244
    • (1992) Protein Sci , vol.1 , pp. 236-244
    • Timm, D.E.1    Neet, K.E.2
  • 33
    • 0028876332 scopus 로고
    • Characterization of the celB gene coding for beta-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus and its expression and site-directed mutation in Escherichia coli
    • Voorhorst WG, Eggen RI, Luesink EJ, de Vos WM (1995) Characterization of the celB gene coding for beta-glucosidase from the hyperthermophilic archaeon Pyrococcus furiosus and its expression and site-directed mutation in Escherichia coli. J Bacteriol 177:7105-7111
    • (1995) J Bacteriol , vol.177 , pp. 7105-7111
    • Voorhorst, W.G.1    Eggen, R.I.2    Luesink, E.J.3    de Vos, W.M.4
  • 34
    • 0041620456 scopus 로고    scopus 로고
    • Purification and characterization of two beta-glucosidases from a thermo-tolerant yeast Pichia etchellsii
    • Wallecha A, Mishra S (2003) Purification and characterization of two beta-glucosidases from a thermo-tolerant yeast Pichia etchellsii. Biochim Biophys Acta 1649:74-84
    • (2003) Biochim Biophys Acta , vol.1649 , pp. 74-84
    • Wallecha, A.1    Mishra, S.2
  • 35
    • 77957034698 scopus 로고    scopus 로고
    • Wood T, Bhat KM (1988) Biomass. Part A. Cellulose and hemicellulose. In: Wood WA, Kellogg ST (eds) Methods in enzymology. Academic, San Diego, pp 87-112
    • Wood T, Bhat KM (1988) Biomass. Part A. Cellulose and hemicellulose. In: Wood WA, Kellogg ST (eds) Methods in enzymology. Academic, San Diego, pp 87-112


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.