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Volumn 128, Issue 1, 2007, Pages 168-172

Regulatory networks: Linking microarray data to systems biology

Author keywords

DNA chips; High throughput methods; Knowledge mining; Promoter analysis; TFBSs frameworks

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTOME;

EID: 33846057516     PISSN: 00476374     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mad.2006.11.022     Document Type: Article
Times cited : (25)

References (30)
  • 2
    • 33750740399 scopus 로고    scopus 로고
    • The nucleosome: a little variation goes a long way
    • Bernstein E., and Hake S.B. The nucleosome: a little variation goes a long way. Biochem. Cell Biol. 84 (2006) 505-517
    • (2006) Biochem. Cell Biol. , vol.84 , pp. 505-517
    • Bernstein, E.1    Hake, S.B.2
  • 3
    • 0036601233 scopus 로고    scopus 로고
    • Functional transcriptomes: comparative analysis of biological pathways and processes in eukaryotes to infer genetic networks among transcripts
    • Bono H., and Okazaki Y. Functional transcriptomes: comparative analysis of biological pathways and processes in eukaryotes to infer genetic networks among transcripts. Curr. Opin. Struct. Biol. 12 (2002) 355-361
    • (2002) Curr. Opin. Struct. Biol. , vol.12 , pp. 355-361
    • Bono, H.1    Okazaki, Y.2
  • 4
    • 33745422067 scopus 로고    scopus 로고
    • Role of transcriptional networks in coordinating early events during kidney development
    • Boyle S., and De Caestecker M. Role of transcriptional networks in coordinating early events during kidney development. Am. J. Physiol. Renal. Physiol. 291 (2006) F1-F8
    • (2006) Am. J. Physiol. Renal. Physiol. , vol.291
    • Boyle, S.1    De Caestecker, M.2
  • 5
    • 0242626166 scopus 로고    scopus 로고
    • The human CYP19 (aromatase P450) gene: update on physiologic roles and genomic organization of promoters
    • Bulun S.E., Sebastian S., Takayama K., Suzuki T., Sasano H., and Shozu M. The human CYP19 (aromatase P450) gene: update on physiologic roles and genomic organization of promoters. J. Steroid Biochem. Mol. Biol. 86 (2003) 219-224
    • (2003) J. Steroid Biochem. Mol. Biol. , vol.86 , pp. 219-224
    • Bulun, S.E.1    Sebastian, S.2    Takayama, K.3    Suzuki, T.4    Sasano, H.5    Shozu, M.6
  • 6
    • 33645079892 scopus 로고    scopus 로고
    • An integrated biological approach to nuclear receptor signaling in physiological control and disease
    • Carlberg C., and Dunlop T.W. An integrated biological approach to nuclear receptor signaling in physiological control and disease. Crit. Rev. Eukaryot. Gene Expr. 16 (2006) 1-22
    • (2006) Crit. Rev. Eukaryot. Gene Expr. , vol.16 , pp. 1-22
    • Carlberg, C.1    Dunlop, T.W.2
  • 7
    • 33746618050 scopus 로고    scopus 로고
    • The impact of chromatin organization of Vitamin D target genes
    • Carlberg C., and Dunlop T.W. The impact of chromatin organization of Vitamin D target genes. Anticancer Res. 26 (2006) 2637-2645
    • (2006) Anticancer Res. , vol.26 , pp. 2637-2645
    • Carlberg, C.1    Dunlop, T.W.2
  • 9
    • 1242315665 scopus 로고    scopus 로고
    • How bioinformatics can help reverse engineer human aging?
    • De Magalhaes J.P., and Toussaint O. How bioinformatics can help reverse engineer human aging?. Ageing Res. Rev. 3 (2004) 125-141
    • (2004) Ageing Res. Rev. , vol.3 , pp. 125-141
    • De Magalhaes, J.P.1    Toussaint, O.2
  • 12
    • 33745218991 scopus 로고    scopus 로고
    • Time, tumours and telomeres. Meeting on cancer and aging
    • Finkel T., Vijg J., and Shay J.W. Time, tumours and telomeres. Meeting on cancer and aging. EMBO Rep. 7 (2006) 479-483
    • (2006) EMBO Rep. , vol.7 , pp. 479-483
    • Finkel, T.1    Vijg, J.2    Shay, J.W.3
  • 14
    • 33748071445 scopus 로고    scopus 로고
    • The retinoblastoma gene is involved in multiple aspects of stem cell biology
    • Galderisi U., Cipollaro M., and Giordano A. The retinoblastoma gene is involved in multiple aspects of stem cell biology. Oncogene 25 (2006) 5250-5256
    • (2006) Oncogene , vol.25 , pp. 5250-5256
    • Galderisi, U.1    Cipollaro, M.2    Giordano, A.3
  • 15
    • 33746489367 scopus 로고    scopus 로고
    • An assessment of recently published gene expression data analyses: reporting experimental design and statistical factors
    • Jafari P., and Azuaje F. An assessment of recently published gene expression data analyses: reporting experimental design and statistical factors. BMC Med. Inform. Decis. Mak. 6 (2006) 27
    • (2006) BMC Med. Inform. Decis. Mak. , vol.6 , pp. 27
    • Jafari, P.1    Azuaje, F.2
  • 16
    • 0036274359 scopus 로고    scopus 로고
    • The fundamental role of epigenetic events in cancer
    • Jones P.A., and Baylin S.B. The fundamental role of epigenetic events in cancer. Nat. Rev. Genet. 3 (2002) 415-428
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 415-428
    • Jones, P.A.1    Baylin, S.B.2
  • 17
    • 0036500993 scopus 로고    scopus 로고
    • Systems biology: a brief overview
    • Kitano H. Systems biology: a brief overview. Science 295 (2002) 1662-1664
    • (2002) Science , vol.295 , pp. 1662-1664
    • Kitano, H.1
  • 18
    • 33748358764 scopus 로고    scopus 로고
    • Senescence and cell cycle control
    • Kiyokawa H. Senescence and cell cycle control. Results Probl. Cell Differ. 42 (2006) 257-270
    • (2006) Results Probl. Cell Differ. , vol.42 , pp. 257-270
    • Kiyokawa, H.1
  • 19
    • 33748540014 scopus 로고    scopus 로고
    • Caloric restriction and intermittent fasting: two potential diets for successful brain aging
    • Martin B., Mattson M.P., and Maudsley S. Caloric restriction and intermittent fasting: two potential diets for successful brain aging. Ageing Res. Rev. 5 (2006) 332-353
    • (2006) Ageing Res. Rev. , vol.5 , pp. 332-353
    • Martin, B.1    Mattson, M.P.2    Maudsley, S.3
  • 21
    • 33745393068 scopus 로고    scopus 로고
    • Liquid chromatography with tandem mass spectrometry-based proteomic discovery in aging and Alzheimer's disease
    • Montine T.J., Woltjer R.L., Pan C., Montine K.S., and Zhang J. Liquid chromatography with tandem mass spectrometry-based proteomic discovery in aging and Alzheimer's disease. NeuroRx 3 (2006) 336-343
    • (2006) NeuroRx , vol.3 , pp. 336-343
    • Montine, T.J.1    Woltjer, R.L.2    Pan, C.3    Montine, K.S.4    Zhang, J.5
  • 22
    • 33646709458 scopus 로고    scopus 로고
    • Gene expression profiling of breast cancer
    • Nagasaki K., and Miki Y. Gene expression profiling of breast cancer. Breast Cancer 13 (2006) 2-7
    • (2006) Breast Cancer , vol.13 , pp. 2-7
    • Nagasaki, K.1    Miki, Y.2
  • 24
    • 0034785443 scopus 로고    scopus 로고
    • Identifying regulatory networks by combinatorial analysis of promoter elements
    • Pilpel Y., Sudarsanam P., and Church G.M. Identifying regulatory networks by combinatorial analysis of promoter elements. Nat. Genet. 29 (2001) 153-159
    • (2001) Nat. Genet. , vol.29 , pp. 153-159
    • Pilpel, Y.1    Sudarsanam, P.2    Church, G.M.3
  • 25
    • 31044445400 scopus 로고    scopus 로고
    • Bioinformatics and proteomics approaches for aging research
    • Raghothama C., Harsha H.C., Prasad C.K., and Pandey A. Bioinformatics and proteomics approaches for aging research. Biogerontology 6 (2005) 227-232
    • (2005) Biogerontology , vol.6 , pp. 227-232
    • Raghothama, C.1    Harsha, H.C.2    Prasad, C.K.3    Pandey, A.4
  • 26
    • 33747172229 scopus 로고    scopus 로고
    • Inflamm-aging, cytokines and aging: state of the art, new hypotheses on the role of mitochondria and new perspectives from systems biology
    • Salvioli S., Capri M., Valensin S., Tieri P., Monti D., Ottaviani E., and Franceschi C. Inflamm-aging, cytokines and aging: state of the art, new hypotheses on the role of mitochondria and new perspectives from systems biology. Curr. Pharm. Des. 12 (2006) 3161-3171
    • (2006) Curr. Pharm. Des. , vol.12 , pp. 3161-3171
    • Salvioli, S.1    Capri, M.2    Valensin, S.3    Tieri, P.4    Monti, D.5    Ottaviani, E.6    Franceschi, C.7
  • 28
    • 33646689347 scopus 로고    scopus 로고
    • Maintaining genetic integrity in aging: a zero sum game
    • Suh Y., and Vijg J. Maintaining genetic integrity in aging: a zero sum game. Antioxid Redox Signal 8 (2006) 559-571
    • (2006) Antioxid Redox Signal , vol.8 , pp. 559-571
    • Suh, Y.1    Vijg, J.2
  • 29
    • 33748351992 scopus 로고    scopus 로고
    • Analysis of promoter regions of co-expressed genes identified by microarray analysis
    • Veerla S., and Hoglund M. Analysis of promoter regions of co-expressed genes identified by microarray analysis. BMC Bioinform. 7 (2006) 384
    • (2006) BMC Bioinform. , vol.7 , pp. 384
    • Veerla, S.1    Hoglund, M.2
  • 30
    • 0037785111 scopus 로고    scopus 로고
    • Computer modeling of promoter organization as a tool to study transcriptional coregulation
    • Werner T., Fessele S., Maier H., and Nelson P.J. Computer modeling of promoter organization as a tool to study transcriptional coregulation. FASEB J. 17 (2003) 1228-1237
    • (2003) FASEB J. , vol.17 , pp. 1228-1237
    • Werner, T.1    Fessele, S.2    Maier, H.3    Nelson, P.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.