Binding of the universal minicircle sequence binding protein at the kinetoplast DNA replication origin

Journal of Biological Chemistry

Volumn 281, Issue 49, 2006, Pages 37468-37476

  Onn, Itay ^a,b   Kapeller, Irit ^a   Abu Elneel, Kawther ^a,c   Shlomai, Joseph ^a  

^a HEBREW UNIVERSITY OF JERUSALEM   (Israel)

^b Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HEXAMERS; KINETOPLAST DNA; MITOCHONDRIAL DNA;

AGGLOMERATION; CONDENSATION; DNA; GENETIC ENGINEERING; MOLECULAR BIOLOGY;

PROTEINS;

BINDING PROTEIN; DOUBLE STRANDED DNA; KINETOPLAST DNA; MINICIRCLE DNA; SINGLE STRANDED DNA; UNCLASSIFIED DRUG; UNIVERSAL MINICIRLE SEQUENCE BINDING PROTEIN;

ARTICLE; BINDING AFFINITY; BINDING SITE; CRITHIDIA FASCICULATA; DNA CROSS LINKING; DNA REPLICATION; DNA SEQUENCE; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; PRIORITY JOURNAL;

ANIMALS; BASE SEQUENCE; BINDING SITES; CRITHIDIA FASCICULATA; DNA, KINETOPLAST; DNA-BINDING PROTEINS; NUCLEIC ACID CONFORMATION; PROTEIN BINDING; PROTOZOAN PROTEINS; REPLICATION ORIGIN;

CRITHIDIA FASCICULATA; TRYPANOSOMATIDAE;

EID: 33846025784     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M606374200     Document Type: Article

References (55)

1. Ray, D. S. (1987) Plasmid 17, 177-190
2. Shlomai, J. (1994) Parasitol. Today 10, 341-346
3. Shapiro, T. A., and Englund, P. T. (1995) Annu. Rev. Microbiol. 49, 117-143
4. Morris, J. C., Drew, M. E., Klingbeil, M. M., Motyka, S. A., Saxowsky, T. T., Wang, Z., and Englund, P. T. (2001) Int. J. Parasitol. 31, 453-458
5. Shlomai, J. (2004) Curr. Mol. Med. 4, 623-647
6. Stuart, K., Allen, T. E., Heidmann, S., and Seiwert, S. D. (1997) Microbiol. Mol. Biol. Rev. 61, 105-120
7. Gott, J. M., and Emeson, R. B. (2000) Annu. Rev. Genet. 34, 499-531
8. Simpson, L., Thiemann, O. H., Savill, N. J., Alfonzo, J. D., and Maslov, D. A. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 6986-6993
9. Birkenmeyer, L., and Ray, D. S. (1986) J. Biol. Chem. 261, 2362-2368
10. Woodward, R., and Gull, K. (1990) J. Cell Sci. 95, 49-57
11. Drew, M. E., and Englund, P. T. (2001) J. Cell Biol. 153, 735-744
12. Birkenmeyer, L., Sugisaki, H., and Ray, D. S. (1987) J. Biol. Chem. 262, 2384-2392
13. Kitchin, P. A., Klein, V. A., and Englund, P. T. (1985) J. Biol. Chem. 260, 3844-3851
14. Tzfati, Y., Abeliovich, H., Kapeller, I., and Shlomai, J. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 6891-6895
15. Abeliovich, H., Tzfati, Y., and Shlomai, J. (1993) Mol. Cell. Biol. 13, 7766-7773
16. Tzfati, Y., Abeliovich, H., Avrahami, D., and Shlomai, J. (1995) J. Biol. Chem. 270, 21339-21345
17. Tzfati, Y., and Shlomai, J. (1998) Mol. Biochem. Parasitol. 94, 137-141
18. Hertz-Fowler, C., Peacock, C. S., Wood, V., Aslett, M., Kerhornou, A., Mooney, P., Tivey, A., Berriman, M., Hall, N., Rutherford, K., Parkhill, J., Ivens, A. C., Rajandream, M. A., and Barrell, B. (2004) Nucleic Acids Res. 32, 339-343
19. Abu-Elneel, K., Kapeller, I., and Shlomai, J. (1999) J. Biol. Chem. 274, 13419-13426
20. Katz, R. A., and Jentoft, J. E. (1989) BioEssays 11, 176-181
21. Urbaneja, M. A., Kane, B. P., Johnson, D. G., Gorelick, R. J., Henderson, L. E., and Casas-Finet, J. R. (1999) J. Mol. Biol. 287, 59-75
22. Rajavashisth, T. B., Taylor, A. K., Andalibi, A., Svenson, K. L., and Lusis, A. J. (1989) Science 245, 640-643
23. Onn, I., Milman-Shtepel, N., and Shlomai, J. (2004) Eukaryot. Cell 3, 277-287
24. Abu-Elneel, K., Robinson, D. R., Drew, M. E., Englund, P. T., and Shlomai, J. (2001) J. Cell Biol. 153, 725-734
25. Avrahami, D., Tzfati, Y., and Shlomai, J. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 10511-10515
26. Xu, C., and Ray, D. S. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 1786-1789
27. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed., pp. 9.31-9.58, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
28. Sugisaki, H., and Ray, D. S. (1987) Mol. Biochem. Parasitol. 23, 253-263
29. Bolshoy, A., McNamara, P., Harrington, R. E., and Trifonov, E. N. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 2312-2316
30. el Hassan, M. A., and Calladine, C. R. (1996) J. Mol. Biol. 259, 95-103
31. Schagger, H., and Von Jagow, G. (1987) Anal. Biochem. 166, 368-379
32. Zuker, M. (1989) Science 244, 48-52
33. Mathews, D. H., Sabina, J., Zuker, M., and Turner, D. H. (1999) J. Mol. Biol. 288, 911-940
34. Jaeger, J. A., Turner, D. H., and Zuker, M. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 7706-7710
35. Fuller, R. S., Funnell, B. E., and Kornberg, A. (1984) Cell 38, 889-900
36. Dodson, M., Roberts, J., McMacken, R., and Echols, H. (1985) Proc. Natl. Acad. Sci. U. S. A. 82, 4678-4682
37. Echols, H. (1986) Science 233, 1050-1056
38. Dodson, M., Dean, F. B., Bullock, P., Echols, H., and Hurwitz, J. (1987) Science 238, 964-967
39. Echols, H. (1990) J. Biol. Chem. 265, 14697-14700
40. Dodson, M., and Echols, H. (1991) Methods Enzymol. 208, 168-196
41. Alfano, C., and McMacken, R. (1989) J. Biol. Chem. 264, 10699-10708
42. Dodson, M., McMacken, R., and Echols, H. (1989) J. Biol. Chem. 264, 10719-10725
43. Borowiec, J. A., and Hurwitz, J. (1988) EMBO J. 7, 3149-3158
44. Borowiec, J. A., Dean, F. B., Bullock, P. A., and Hurvitz, J. (1990) Cell 60, 181-184
45. Elias, P., Gustafsson, C. M., and Hammarsten, O. (1990) J. Biol. Chem. 265, 17167-17173
46. Hazuda, D. J., Perry, H. C., and McClements, W. L. (1992) J. Biol. Chem. 267, 14309-14315
47. Bashaw, J. M., and Yates, J. L. (2001) J. Virol. 75, 10603-10611
48. Bochkarev, A., Barwell, J. A., Pfuetzner, R. A., Bochkareva, E., Frappier, L., and Edwards, A. M. (1996) Cell 84, 791-800
49. Frappier, L., and O'Donnell, M. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 10875-10879
50. Umek, R. M., and Kowakski, D. (1990) Cell 52, 559-567
51. Umek, R. M., and Kowalski, D. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 2486-2490
52. Lyonnais, S., Gorelick, R. J., Mergny, J. L., Le Cam, E., and Mirambeau, G. (2003) Nucleic Acids Res. 31, 5754-5763
53. Krishnamoorthy, G., Roques, B., Darlix, J. L., and Mely, Y. (2003) Nucleic Acids Res. 31, 5425-5432
54. Baba, S., Takahashi, K., Nomura, Y., Noguchi, S., Koyanagi, Y., Yamamoto, N., Takaku, H., and Kawai, G. (2001) Nucleic Acids Res. (suppl.) 155-156
55. Buckman, J. S., Bosche, W. J., and Gorelick, R. J. (2003) J. Virol. 77, 1469-1480