메뉴 건너뛰기




Volumn 22, Issue 1, 2007, Pages 69-80

A mathematical model for the kai-protein-based chemical oscillator and clock gene expression rhythms in cyanobacteria

Author keywords

Bio simulation; Circadian rhythm; Cyanobacteria; KaiC phosphorylation cycle; Mathematical model

Indexed keywords

ADENOSINE TRIPHOSPHATE; GENE PRODUCT; KAIA PROTEIN; KAIB PROTEIN; KAIC PROTEIN; TRANSCRIPTION FACTOR CLOCK; UNCLASSIFIED DRUG;

EID: 33845979486     PISSN: 07487304     EISSN: 15524531     Source Type: Journal    
DOI: 10.1177/0748730406295749     Document Type: Article
Times cited : (47)

References (23)
  • 1
    • 32644489285 scopus 로고    scopus 로고
    • Hourglass model for a protein-based circadian oscillator
    • Emberly E and Wingreen NS (2006) Hourglass model for a protein-based circadian oscillator. Phys Rev Lett 96: 038303-038303.
    • (2006) Phys Rev Lett , vol.96 , pp. 038303-038303
    • Emberly, E.1    Wingreen, N.S.2
  • 4
    • 21444458211 scopus 로고    scopus 로고
    • Tetrameric architecture of the circadian clock protein KaiB. a novel interface for intermolecular interactions and its impact on the circadian rhythm
    • Hitomi K, Oyama T, Han S, Arvai AS, and Getzoff ED (2005) Tetrameric architecture of the circadian clock protein KaiB. A novel interface for intermolecular interactions and its impact on the circadian rhythm. J Biol Chem 280: 19127-19135.
    • (2005) J Biol Chem , vol.280 , pp. 19127-19135
    • Hitomi, K.1    Oyama, T.2    Han, S.3    Arvai, A.S.4    Getzoff, E.D.5
  • 5
    • 4344656888 scopus 로고    scopus 로고
    • Circadian rhythms in the synthesis and degradation of a master clock protein KaiC in cyanobacteria
    • Imai K, Nishiwaki T, Kondo T, and Iwasaki H (2004) Circadian rhythms in the synthesis and degradation of a master clock protein KaiC in cyanobacteria. J Biol Chem 279: 36534-36539.
    • (2004) J Biol Chem , vol.279 , pp. 36534-36539
    • Imai, K.1    Nishiwaki, T.2    Kondo, T.3    Iwasaki, H.4
  • 8
    • 0033104504 scopus 로고    scopus 로고
    • Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria
    • Iwasaki H, Taniguchi Y, Ishiura M, and Kondo T (1999) Physical interactions among circadian clock proteins KaiA, KaiB and KaiC in cyanobacteria. EMBO J 18: 1137-1145.
    • (1999) EMBO J , vol.18 , pp. 1137-1145
    • Iwasaki, H.1    Taniguchi, Y.2    Ishiura, M.3    Kondo, T.4
  • 9
    • 0037462789 scopus 로고    scopus 로고
    • Circadian formation of clock protein complexes by KaiA, KaiB, KaiC, and SasA in cyanobacteria
    • Kageyama H, Kondo T, and Iwasaki H (2003) Circadian formation of clock protein complexes by KaiA, KaiB, KaiC, and SasA in cyanobacteria. J Biol Chem 278: 2388-2395.
    • (2003) J Biol Chem , vol.278 , pp. 2388-2395
    • Kageyama, H.1    Kondo, T.2    Iwasaki, H.3
  • 10
    • 0037881861 scopus 로고    scopus 로고
    • KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system
    • Kitayama Y, Iwasaki H, Nishiwaki T, and Kondo T (2003) KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. EMBO J 22: 2127-2134.
    • (2003) EMBO J , vol.22 , pp. 2127-2134
    • Kitayama, Y.1    Iwasaki, H.2    Nishiwaki, T.3    Kondo, T.4
  • 11
    • 33748441404 scopus 로고    scopus 로고
    • A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression
    • Kurosawa G, Aihara K, and Iwasa Y (2006) A model for the circadian rhythm of cyanobacteria that maintains oscillation without gene expression. Biophys J 91: 2015-2023.
    • (2006) Biophys J , vol.91 , pp. 2015-2023
    • Kurosawa, G.1    Aihara, K.2    Iwasa, Y.3
  • 12
    • 30644471172 scopus 로고    scopus 로고
    • In vivo circadian function of casein kinase 2 phosphorylation sites in Drosophila PERIOD
    • Lin JM, Schroeder A, and Allada R (2005) In vivo circadian function of casein kinase 2 phosphorylation sites in Drosophila PERIOD. J Neurosci 25: 11175-11183.
    • (2005) J Neurosci , vol.25 , pp. 11175-11183
    • Lin, J.M.1    Schroeder, A.2    Allada, R.3
  • 18
    • 22744455874 scopus 로고    scopus 로고
    • Transcriptional feedback of Neurospora circadian clock gene by phosphorylation-dependent inactivation of its transcription factor
    • Schafmeier T, Haase A, Kaldi K, Scholz J, Fuchs M, and Brunner M (2005) Transcriptional feedback of Neurospora circadian clock gene by phosphorylation-dependent inactivation of its transcription factor. Cell 122: 235-246.
    • (2005) Cell , vol.122 , pp. 235-246
    • Schafmeier, T.1    Haase, A.2    Kaldi, K.3    Scholz, J.4    Fuchs, M.5    Brunner, M.6
  • 19
    • 2142811057 scopus 로고    scopus 로고
    • Simulation of Drosophila circadian oscillations, mutations, and light responses by a model with VRI, PDP-1, and CLK
    • Smolen P, Hardin PE, Lo BS, Baxter DA, and Byrne JH (2004) Simulation of Drosophila circadian oscillations, mutations, and light responses by a model with VRI, PDP-1, and CLK. Biophys J 86: 2786-2802.
    • (2004) Biophys J , vol.86 , pp. 2786-2802
    • Smolen, P.1    Hardin, P.E.2    Lo, B.S.3    Baxter, D.A.4    Byrne, J.H.5
  • 20
    • 33745608713 scopus 로고    scopus 로고
    • Transcriptional autoregulation by phosphorylated and non-phosphorylated KaiC in cyanobacterial circadian rhythms
    • Takigawa-Imamura H and Mochizuki A (2006) Transcriptional autoregulation by phosphorylated and non-phosphorylated KaiC in cyanobacterial circadian rhythms. J Theor Biol 241: 178-192.
    • (2006) J Theor Biol , vol.241 , pp. 178-192
    • Takigawa-Imamura, H.1    Mochizuki, A.2
  • 21
    • 12244296161 scopus 로고    scopus 로고
    • No transcription-translation feedback in circadian rhythm of KaiC phosphorylation
    • Tomita J, Nakajima M, Kondo T, and Iwasaki H (2005) No transcription-translation feedback in circadian rhythm of KaiC phosphorylation. Science 307: 251-254.
    • (2005) Science , vol.307 , pp. 251-254
    • Tomita, J.1    Nakajima, M.2    Kondo, T.3    Iwasaki, H.4
  • 22
    • 3342889359 scopus 로고    scopus 로고
    • Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: Implications for KaiC regulation
    • Vakonakis I and LiWang AC (2004) Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation. Proc Natl Acad Sci U S A 101: 10925-10930.
    • (2004) Proc Natl Acad Sci U S a , vol.101 , pp. 10925-10930
    • Vakonakis, I.1    Liwang, A.C.2
  • 23
    • 0038219594 scopus 로고    scopus 로고
    • Cyanobacterial circadian clockwork: Roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC
    • Xu Y, Mori T, and Johnson CH (2003) Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC. EMBO J 22: 2117-2126.
    • (2003) EMBO J , vol.22 , pp. 2117-2126
    • Xu, Y.1    Mori, T.2    Ch, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.