Intraspecific variation in isolates of Bursaphelenchus xylophilus (Nematoda: Aphelenchoididae) revealed by ISSR and RAPD fingerprints

Journal of Plant Diseases and Protection

Volumn 113, Issue 6, 2006, Pages 275-282

  Metge, K ^a   Burgermeister, W ^a  

^a INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

Author keywords

Genetic variation; Inter simple sequence repeat; Invasive alien species; Pathway of introduction; Pinewood nematode; Random amplified polymorphic DNA

Indexed keywords

CLUSTER ANALYSIS; DNA FINGERPRINTING; EVERGREEN TREE; GENETIC VARIATION; INTRASPECIFIC VARIATION; INTRODUCED SPECIES; NEMATODE; WILT;

ASIA; CANADA; CHINA; EURASIA; EUROPE; FAR EAST; JAPAN; KOREA; NORTH AMERICA; PORTUGAL; SOUTH KOREA; SOUTHERN EUROPE; UNITED STATES;

APHELENCHOIDIDAE; BURSAPHELENCHUS XYLOPHILUS; NEMATODA;

EID: 33845953397     PISSN: 18613829     EISSN: 18613837     Source Type: Journal    
DOI: 10.1007/BF03356193     Document Type: Article

References (32)

1. ABBOT, P., 2001: Individual and population variation in invertebrates revealed by inter-simple sequence repeats (ISSRs). 3 pp. J. Insect Sci., 1.8. Available online: insectscience.org/1.8.
2. BRAASCH, H., W. BURGERMEISTER, K.H. PASTRIK, 1995: Differentiation of three Bursaphelenchus species by means of RAPD-PCR. Nachrichtenbl. Deut. Pflanzenschutzd. 47, 310-314.
3. CASWELL-CHEN, E.P., V.M. WILLIAMSON, F.F. WU, 1992: DNA analysis of Heterodera cruciferae and Heterodera schachtii populations. J. Nematol. 24, 343-351.
4. EVANS, H.F., D.G. MCNAMARA, H. BRAASCH, J. CHADOEUF, C. MAGNUSSON, 1996: Pest Risk Analysis (PRA) for the territories of the European Union (as PRA area) on Bursaphelenchus xylophilus and its vectors in the genus Monochamus. European and Mediteranean Plant Protection Organisation, OEPP/EPPO Bull. 26, 99-249.
5. HOOD, G.M., 2005: PopTools version 2.6.6. www.cse.csiro.au/ poptools.
6. IRDANI, T., A. MARINARI, P. BOGANI, L. AMBROGIONI, S. CAROPPO, M. BUIATTI, 1995: Molecular diversity among pine wood Bursaphelenchus populations detected by RAPD analysis. Redia 78, 149-161.
7. KIYOHARA, T., Y. TOKUSHIGE, 1971: [Inoculation experiments of a nematode, Bursaphelenchus sp., onto pine trees.] J. Jpn. For. Soc. 53, 210-218.
8. KOSTIA, S., M. RUOHONEN-LEHTO, R. VÄINÖLÄ, S.L. VARVIO, 2000: Phylogenetic information in inter-SINE and inter-SSR fingerprints of the Artiodactyla and evolution of the Bov-tA SINE. Heredity 84, 37-45.
9. MAMIYA, Y., N. ENDA, 1979: Bursaphelenchus mucronatus n. sp. (Nematoda, Aphelenchoididae) from pine wood and its biology and pathogenicity to pine trees. Nematologica 25, 353-361.
10. MANTEL, N., 1967: The detection of disease clustering and generalized regression approach. Cancer Res. 27, 209-220.
11. METGE, K., W. BURGERMEISTER, 2005: Molecular identification and pathway analysis of the introduced pinewood nematode Bursaphelenchus xylophilus. In D.V. Alford, G.F. Backhaus (eds.): Plant Protection and Plant Health in Europe: Introduction and Spread of Invasive Species. BCPC Symp. Proc. 81, 259-260.
12. METGE, K., T. SCHRÖDER, W. BURGERMEISTER, 2004: Biogeographische Untersuchungen zur Herkunft des nach Europa eingeschleppten Kiefernholznematoden Bursaphelenchus xylophilus (Nematoda: Aphelenchoididae). Mitt. Biol. Bundesanst. 396, 296-297.
13. MOTA, M.M., H. BRAASCH, M.A. BRAVO, A.C. PENAS, W. BURGERMEISTER, K. METGE, E. SOUSA, 1999: First report of Bursaphelenchus xylophilus in Portugal and in Europe. Nematology 1, 727-734.
14. NEI, M., W.H. LI, 1979: Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Nat. Acad. Sci. USA 76, 5269-5273.
15. NICKLE, W.R., 1970: Taxonomic review of the genera Aphelenchoidea (Fuchs, 1937) Thorne, 1949 (Nematoda - Tylenchida). J. Nematol. 2, 375-392.
16. PFEILSTETTER, E., 2003: Monitoring invasiver Arten vor dem Hintergrund pflanzengesundheitlicher Regelungen [Monitoring of invasive species in relation to phytosanitary regulations]. Schriftenr. BMVEL A Angew. Wiss. 498, 233-237.
17. REDDY, K.D., J. NAGARAJU, E.G. ABRAHAM, 1999: Genetic characterization of the silkworm Bombyx mori by simple sequence repeat (SSR)-anchored PCR. Heredity 83, 681-687.
18. REDDY, M.P., N. SARLA, E.A. SIDDIQ, 2002: Inter simple sequence repeat (ISSR) polymorphism and its application in plant breeding. Euphytica 128, 9-17.
19. RÜHM, W., 1956: Die Nematoden der Ipiden. Parasitol. Schriftenr. Jena 6, 1-437.
20. SAITOU, N., M. NEI, 1987: The Neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
21. SAKAI, A.K., F.W. ALLENDORF, J.S. HOLT, D.M. LODGE, J. MOLOFSKY, K.A. WITH, S. BAUGHMAN, R.J. CABIN, J.E. COHEN, N.C. ELLSTRAND, D.E. MCCAULEY, P. O'NEIL, J.M. PARKER, J.N. THOMPSON, S.G. WELLER, 2001: The population biology of invasive species. Annu. Rev. Ecol. Syst. 32, 305-332.
22. SCHMITZ, B., W. BURGERMEISTER, H. BRAASCH, 1998: Molecular genetic classification of Central European Meloidogyne chitwoodi and M. fallax populations. Nachrichtenbl. Deut. Pflanzenschutzd. 50, 310-317.
23. SNEATH, P.H.A., R.R. SOKAL, 1973: Numerical Taxonomy: The principles and Practice of Numerical Classification. W.H. Freeman and Company, San Francisco, CA, USA.
24. SNELL, T.L., M.A. COFFROTH, 1999: Use of intersimple sequence repeats in analyzing intra- and interspecific variability in scleractinian corals. Am. Zool. 39, 122A.
25. SOUSA, E., M.A. BRAVO, J. PIRES, P. NAVES, A.C. PENAS, L. BONIFACIO, M.M. MOTA, 2001: Bursaphelenchus xylophilus (Nematoda; Aphelenchoididae) associated with Monochamus galloprovincialis (Coleoptera; Cerambycidae) in Portugal. Nematology 3, 89-91.
26. STEINER, G., E.M. BUHRER, 1934: Aphelenchoides xylophilus n. sp., a nematode associated with blue-strain and other fungi in timber. J. Agric. Res. 48, 949-951.
27. SWOFFORD, D.L., 1998: Phylogenetic Analysis Using Parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, MA, USA.
28. SYLVESTER, H.A., 2003: Inter-simple sequence repeat-restriction fragment length polymorphisms for DNA fingerprinting. Biotechniques 34, 942-944.
29. TOMICZEK, C., H. BRAASCH, W. BURGERMEISTER, K. METGE, U. HOYER, M. BANDSTETTER, 2003: Identification of Bursaphelenchus spp. isolated from Chinese packaging wood imported to Austria. Nematology 5, 573-581.
30. WELSH, J., M. MCCLELLAND, 1990: Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18, 7213-7218.
31. WILLIAMS, J.G.K., A.R. KUBELIK, K.J. LIVAK, J.A. RAFALSKI, S.V. TINGEY, 1990: DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18, 6531-6535.
32. ZIETKIEWICZ, E., A. RAFALSKI, D. LABUDA, 1994: Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20, 176-183.