Genetic diversity and ecological differentiation in the endangered fen orchid (Liparis loeselii)

Conservation Genetics

Volumn 8, Issue 1, 2007, Pages 177-184

  Pillon, Yohan ^a,d,e   Qamaruz Zaman, Faridah ^b,f   Fay, Michael F ^b   Hendoux, Frédéric ^c   Piquot, Yves ^a  

^a UNIV LILLE   (France)

^b JODRELL LABORATORY   (United Kingdom)

^c Conservatoire Botanique National de Bailleul Hameau de Haendries   (France)

^d INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (New Caledonia)

^e UNIVERSITÉ DE LA NOUVELLE CALÉDONIE   (New Caledonia)

^f UNIVERSITY PUTRA MALAYSIA   (Malaysia)

Author keywords

AFLP; Autogamy; Clonality; Conservation genetics; Liparis loeselii

Indexed keywords

ANGIOSPERM; DUNE; ENDANGERED SPECIES; FEN; GENE FLOW; GENETIC DIFFERENTIATION; GENETIC STRUCTURE; LEAF MORPHOLOGY; RARITY;

EURASIA; EUROPE; FRANCE; NORTH AMERICA; UNITED KINGDOM; WESTERN EUROPE;

LIPARIS LOESELII; ORCHIDACEAE;

EID: 33845933761     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-006-9160-7     Document Type: Article

References (49)

1. Arditti J, Ghani AKA (2000) Numerical and physical properties of orchid seeds and their biological implications. New Phytol 145:367-421
2. Bateman RM (2001) Evolution and classification of European orchids: insights from molecular and morphological characters. J Eur Orch 33:33-119
3. Bennett MD, Leitch IJ (2003) Angiosperm DNA C-values database. Royal Botanic Gardens, Kew
4. Bidartondo MI, Burghardt B, Gebauer G, Bruns TD, Read DJ (2004) Changing partners in the dark: isotopic and molecular evidence of ectomycorrhizal liaisons between forests orchids and trees. Proc R Soc London B 271:1799-1806
5. Cameron KM (2005) Leave it to the leaves: a molecular phylogenetic study of Malaxideae (Epidendroideae, Orchidaceae). Am J Bot 92:1025-1032
6. Casgrain P, Legendre P (1999) The R package for multivariate analysis. Montreal
7. Catling PM (1980) Rain-assisted autogamy in Liparis loeselii (L.) L. C. Rich. (Orchidaceae). Bull Torrey Bot Club 107:525-529
8. Chase MW, Hills HG (1991) Silica gel: an ideal material for field preservation of leaf samples for DNA studies. Taxon 40:215-220
9. Daugherty CH, Cree A, Hay JM, Thompson MB (1990) Neglected taxonomy and continuing extinctions of tuatara (Sphenodon). Nature 347:177-179
10. Delforge P (1994) Guide des Orchidées d'Europe, d'Afrique du Nord et du Proche-Orient, 1st edn. Delachaux et Niestlé, Neuchâtel-Paris
11. Delforge P (2001) Guide des Orchidées d'Europe, d'Afrique du Nord et du Proche-Orient, 2nd edn. Delachaux et Niestlé , Neuchâtel- Paris
12. Ellstrand NC, Roose ML (1987) Patterns of genotypic diversity in clonal plant species. Am J Bot 74:123-131
13. Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479-491
14. Fay MF, Cowan RS, Leitch IJ (2005) The effects of nuclear DNA content (C-value) on the quality and utility of AFLP fingerprints. Ann Bot 95:237-246
15. Felsenstein J (1993) PHYLIP (Phylogeny inference package). Department of Genetics, University of Washington, Seattle
16. Forrest AD, Hollingsworth ML, Hollingsworth PM, Sydes C, Bateman RM (2004) Population genetic structure in European populations of Spiranthes romanzoffiana set in the context of other genetic studies on orchids. Heredity 92:218-227
17. Hedrén M (2001) Conservation priorities in Dactylorhiza, a taxonomically complex genus. Lindleyana 16:17-25
18. Hedrén M, Fay MF, Chase MW (2001) Amplified fragment length polymorphisms (AFLP) reveal details of polyploid evolution in Dactylorhiza (Orchidaceae). Am J Bot 88:1868-1880
19. Hendoux F, Aboucaya A, Bajon R et al (2001) Plan national de conservation du Liparis de Loesel (Liparis loeselii (L.) L.C.M. Rich.). Ministère de l'aménagement du territoire et de l'environnement
20. Jaccard P (1908) Nouvelles recherches sur la distribution florale. Bull Soc Vaud Sci Nat 44:223-270
21. Jensen RJ, Ciofani KM, Miramontes LC (2002) Lines, outlines, and landmarks: morphometric analysis of leaves of Acer rubrum, Acer saccharinum (Aceraceae) and their hybrid. Taxon 51:475-492
22. Jones PS (1998) Aspects of the population biology of Liparis loeselii (L.) Rich. var. ovata Ridd. ex Godfery (Orchidaceae) in the dune slacks of South Wales, UK. Bot J Linn Soc 126:123-139
23. Juan A, Crespo MB, Cowan RS, Lexer C, Fay MF (2004) Patterns of variability and gene flow in Medicago citrina, an endangered endemic of islands in the western Mediterranean, as revealed by amplified fragment length polymorphism (AFLP). Mol Ecol 13:2679-2690
24. Kalinowski ST (2004) Counting alleles with rarefaction: private alleles and hierarchical sampling designs. Conserv Genet 5:539-543
25. Lande R (1988) Genetics and demography in biological conservation. Science 241:1455-1460
26. Luer CA (1975) The native orchids of the United States and Canada, excluding Florida. New York Botanical Garden, New York
27. Maunder M, Cowan RS, Stranc P, Fay MF (2001) The genetic status and conservation managment of two cultivated bulb species extinct in the wild: Tecophilaea cyanocrocus (Chile) and Tulipa sprengeri (Turkey). Conserv Genet 2:193-201
28. May RM (1990) Taxonomy as destiny. Nature 347:129-130
29. Ouborg NJ, Piquot Y, van Groenendael JM (1999) Population genetics, molecular markers and the study of dispersal in plants. J Ecol 87:551-568
30. Pedersen HÆ (1998) Species concept and guidelines for infraspecific taxonomic ranking in Dactylorhiza (Orchidaceae). Nord J Bot 18:289-309
31. Pedersen HÆ (2001) Late-flowering dune populations of Dactylorhiza incarnata (Orchidaceae): variation patterns and taxonomic inferences. Nord J Bot 21:177-186
32. Perrière G, Gouy M (1996) WWW-Query: an on-line retrieval system for biological sequence banks. Biochimie 78:364-369
33. Pillon Y, Fay MF, Shipunov AB, Chase MW (2006) Species diversity versus phylogenetic diversity: a practical study in the taxonomically difficult genus Dactylorhiza (Orchidaceae). Biol Conserv 129:4-13
34. Purvis A, Hector A (2000) Getting the measure of biodiversity. Nature 405:212-219
35. Qamaruz-Zaman F (2000) Conservation genetics of rare and endangered British orchids. PhD Thesis, University of Cambridge
36. Riddlesdell HJ (1907) Liparis loeselii Rich. var. ovata. J Bot 45:449
37. Rosenberg MS (2002) PASSAGE Pattern analysis, spatial statistics, and geographical exegesis. Department of Biology, Arizona State University, Tempe
38. Schneider S, Roessli D, Excoffier L (2000) ARLEQUIN: a software for population genetics data. Genetics and Biometry Laboratory, University of Geneva, Geneva
39. Soltis PS, Gitzendanner MA (1999) Molecular systematics and the conservation of rare species. Conserv Biol 13:471-483
40. Squirrell J, Hollingsworth PM, Bateman RM, Tebbitt MC, Hollingsworth ML (2002) Taxonomic complexity and breeding system transitions: conservation genetics of the Epipactis leptochila complex (Orchidaceae). Mol Ecol 11:1957-1964
41. Taylor DL, Bruns TD (1999) Populations, habitat and genetic correlates of mycorrhizal specialization in the 'cheating' orchids Corallorhiza maculata and C. mertensiana. Mol Ecol 8:1719-1732
42. Travis SE, Maschinski J, Keim P (1996) An analysis of genetic variation in Astragalus cremnophylax var. cremnophylax, a critically endangered plant, using AFLP markers. Mol Ecol 5:735-745
43. Vane-Wright RI, Humphries CJ, Williams PH (1991) What to protect? - Systematics and the agony of choice. Biol Conserv 55:235-254
44. Vekemans X (2002) AFLP-SURV. Laboratoire de Génétique et Ecologie Végétale, Universitélibre de Bruxelles, Bruxelles
45. Vos P, Hogers R, Bleeker M et al (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407-4414
46. Wayne RK, Gittleman JL (1995) The problematic red wolf. Sci Am 273:26-31
47. Wheeler BD, Lambley PW, Geeson J (1998) Liparis loeselii (L.) Rich. in eastern England: constraints on distribution and population development. Bot J Linn Soc 126:141-158
48. World Checklist of Monocots (2004) The Board of Trustees of the Royal Botanic Gardens, Kew
49. Yeh FC, Yang R, Boyle T (1999) POPGENE, microsoft window-based freeware for populations genetic analysis. University of Alberta, Edmonton