Retinal counterion switch mechanism in vision evaluated by molecular simulations

Journal of the American Chemical Society

Volumn 128, Issue 51, 2006, Pages 16502-16503

  Martínez Mayorga, Karina ^a   Pitman, Michael C ^c   Grossfield, Alan ^c   Feller, Scott E ^d   Brown, Michael F ^a,b  

^a University of Arizona   (United States)

^b University of Arizona   (United States)

^c IBM T J WATSON RESEARCH CENTER   (United States)

^d WABASH COLLEGE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RHODOPSIN;

ARTICLE; EVALUATION; INFRARED SPECTROSCOPY; ISOMERIZATION; MONTE CARLO METHOD; NUCLEAR MAGNETIC RESONANCE; PROTEIN CONFORMATION; PROTEIN STABILITY; RAMAN SPECTROMETRY; ULTRAVIOLET SPECTROSCOPY; X RAY CRYSTALLOGRAPHY;

COMPUTER SIMULATION; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, BIOLOGICAL; MOLECULAR STRUCTURE; RHODOPSIN; SCHIFF BASES; SENSITIVITY AND SPECIFICITY; THERMODYNAMICS; VISION;

EID: 33845926317     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0671971     Document Type: Article

References (18)

1. Fanelli, F.; De Benedetti, P. G. Chem. Rev. 2005, 105, 3297-3351.
2. (a) Palczewski, K.; Kumasaka, T.; Hori, T.; Behnke, C. A.; Motoshima, H.; Fox, B. A.; Le Trong, I.; Teller, D. C.; Okada, T.; Stenkamp, R. E.; Yamamoto, M.; Miyano, M. Science 2000, 289, 739-745.
3. (b) Okada, T.; Sugihara, M.; Bondar, A.-N.; Elstner, M.; Entel, P.; Buss, V. J. Mol. Biol. 2004, 342, 571-583.
4. (a) Drews, J. Science 2000, 287, 1960-1964.
5. (b) Filmore, D. Modern Drug Discovery 2004, 7, 24-28.
6. (a) Sakmar, T. P.; Menon, S. T.; Marin, E. P.; Awad, E. S. Annu. Rev. Biophys. Biomol. Struct. 2002, 31, 443-484.
7. (b) Hubbell, W. L.; Altenbach, C.; Hubbell, C. M.; Khorana, H. G. Adv. Protein Chem. 2003, 63, 243-290.
8. (a) Pitman, M. C.; Grossfield, A.; Feller, S. E. J. Am. Chem. Soc. 2005, 127, 4576-4577.
9. (b) Grossfield, A.; Feller, S. E.; Pitman, M. C. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 4888-4893.
10. Saam, J.; Tajkhorshid, E.; Hayashi, S.; Schulten, K. Biophys. J. 2002, 83, 3097-3112.
11. Ruprecht, J. J.; Mielke, T.; Vogel, R.; Villa, C.; Schertler, G. F. X. EMBO J. 2004, 23, 3609-3620.
12. Yan, E. C. Y.; Kazmi, M. A.; Ganim, Z.; Hou, J.-M.; Pan, D.; Chang, B. S. W.; Sakmar, T. P.; Mathies, R. A. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 9262-9267.
13. Lüdeke, S.; Beck, M.; Yan, E. C. Y.; Sakmar, T. P.; Siebert, F.; Vogel, R. J. Mol. Biol. 2005, 353, 345-356.
14. Vogel, R.; Siebert, F.; Yan, E. C. Y.; Sakmar, T. P.; Hirshfeld, A.; Sheves, M. J. Am. Chem. Soc. 2006, 128, 10503-10512.
15. Salgado, G. F. J.; Struts, A. V.; Tanaka, K.; Fujioka, N.; Nakanishi, K.; Brown, M. F. Biochemistry 2004, 43, 12819-12828.
16. Salgado, G. F. J.; Struts, A. V.; Tanaka, K.; Krane, S.; Nakanishi, K.; Brown, M. F. J. Am. Chem. Soc. 2006, 128, 11067-11071.
17. Nevzorov, A. A.; Moltke, S.; Heyn, M. P.; Brown, M. F. J. Am. Chem. Soc. 1999, 121, 7636-7643.
18. Nakamichi, H.; Okada, T. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 12729-12734.