Genotyping of marine viral haemorrhagic septicaemia virus isolated from the Flemish Cap by nucleotide sequence analysis and restriction fragment length polymorphism patterns

Diseases of Aquatic Organisms

Volumn 73, Issue 1, 2006, Pages 23-31

  Lopez Vazquez C ^a   Raynard, R S ^b   Bain, N ^b   Snow, M ^b   Bandin I ^a   Dopazo, C P ^a  

^a Santiago de Compostela Spain   (Spain)

^b MARINE LABORATORY   (United Kingdom)

Author keywords

Genotyping; Phylogenetics; Restriction fragment length polymorphism; RFLP; Sequencing analysis; VHSV; Viral haemorrhagic septicaemia virus; Wild fish

Indexed keywords

EEL; FLATFISH; GENOTYPE; PHYLOGENETICS; POLYMORPHISM; VIRAL DISEASE;

ATLANTIC OCEAN; EURASIA; EUROPE; FLEMISH CAP; FRANCE; IRELAND; NORTH SEA; UNITED KINGDOM; WESTERN EUROPE;

ANGUILLA ANGUILLA; REINHARDTIUS HIPPOGLOSSOIDES; SCOPHTHALMUS MAXIMUS; VIRAL HEMORRHAGIC SEPTICEMIA VIRUS;

EID: 33845869570     PISSN: 01775103     EISSN: None     Source Type: Journal    
DOI: 10.3354/dao073023     Document Type: Article

References (31)

1. Benmansour A, Basurco B, Monnier AF, Vende P, Winton JR, de Kinkelin, P (1997) Sequence variation of the glycoprotein gene identifies three distinct lineages within field isolates of viral haemorrhagic septicaemia virus, a fish rhabdovirus. J Gen Virol 78:2837-2846
2. Biering E, Melby HP, Mortensen SH (1997) Sero- and genotyping of some marine aquatic birnavirus isolates from Norway. Dis Aquat Org 28:169-174
3. Brudeseth BE, Evensen Ø (2002) Occurrence of viral haemorrhagic septicaemia virus (VHSV) in wild marine fish species in the coastal regions of Norway. Dis Aquat Org 52: 21-28
4. Cutrín JM, Barja JL, Nicholson BL, Bandín I, Blake S, Dopazo CP (2004) Restriction fragment length polymorphisms and sequence analysis: an approach for genotyping infectious pancreatic necrosis virus reference strains and other aquabirnaviruses isolated from northwestern Spain. Appl Environ Microbiol 70(2):1059-1067
5. Dixon PF, Feist S, Kehoe E, Parry L, Stone DM, Way K (1997) Isolation of viral haemorrhagic septicaemia virus from Atlantic herring Clupea harengus from the English channel. Dis Aquat Org 30:81-89
6. Dixon PF, Avery S, Chambers E, Feist S and 7 others (2003) Four years of monitoring for viral haemorrhagic septicaemia virus in marine waters around the United Kingdom. Dis Aquat Org 54:175-186
7. Dopazo CP, Bandín I, López-Vázquez C, Lamas J, Noya M, Barja JL (2002) Isolation of viral hemorrhagic septicemia virus from Greenland halibut Reinhardtius hippoglossoides caught at the Flemish Cap. Dis Aquat Org 50: 171-179
8. Einer-Jensen K, Ahrens P, Forsberg R, Lorenzen N (2004) Evolution of the fish rhabdovirus viral haemorrhagic septicaemia virus. J Gen Virol 85:1167-1179
9. Einer-Jensen K, Winton J, Lorenzen N (2005) Genotyping of the fish rhabdovirus, viral haemorrhagic septicaemia virus, by restriction fragment length polymorphism. Vet Microbiol 106:167-178
10. Hedrick RP, Batts WN, Yun S, Traxler GS, Kaufman J, Winton JR (2003) Host and geographic range extensions of the North American strain of viral hemorrhagic septicemia virus. Dis Aquat Org 55:211-220
11. Heppell J, Berthiaume L, Tarrab E, Lecomte J, Arella M (1992) Evidence of genomic variations between infectious pancreatic necrosis virus strains determined by restriction fragment profiles. J Gen Virol 73:2863-2870
12. Isshiki T, Nishizawa T, Kobayashi T, Nagano T, Miyazaki T (2001) An outbreak of VHSV (viral hemorrhagic septicemia virus) infection in farmed Japanese flounder Paralichtys olivaceus in Japan. Dis Aquat Org 47:87-99
13. King JA, Snow M, Skall HF, Raynard RS (2001) Experimental susceptibility of Atlantic salmon Salmo salar and turbot Scophthalmus maximus to European freshwater and marine isolates of viral haemorrhagic septicaemia virus. Dis Aquat Org 47:25-31
14. Kurath G, Highman KH, Björklund HV (1995) The NV genes of fish rhabdoviruses: development of RNAses protection assays for rapid assessment of genetic variation. Vet Res 26(5-6):477-485
15. Lee MK, Blake SL, Singer JT, Nicholson BL (1996) Genomic variation of aquatic birnaviruses analyzed with restriction fragment length polymorphisms. Appl Environ Microbiol 62(7):2513-2520
16. Le Berre M, de Kinkelin P, Metzger A (1977) Identification serologique des rhabdovirus des salmonides. Bull Off Int Epizoot 87:391-393
17. Lorenzen N, Olesen NJ, Jørgensen PEV (1993) Antibody response to VHS virus proteins in rainbow trout. Fish Shellfish Immunol 3:461-473
18. Meier W, Schmitt M, Wahli T (1994) Viral hemorrhagic septicemia (VHS) of nonsalmonids. Annu Rev Fish Dis 4: 359-373.
19. Meyers TR, Short S, Lipson K (1999) Isolation of the North American strain of viral hemorrhagic septicemia (VHS) associated with epizootic mortality in two new host species of Alaskan marine fish. Dis Aquat Org 38:81-86.
20. Mortensen HF, Heurer OE, Lorenzen N, Otte L, Olesen NJ (1999). Isolation of viral haemorrhagic septicaemia virus (VHSV) from wild marine fish species in the Baltic Sea, Kattegat, Skagerrak and the North Sea. Virus Res 63: 95-106
21. Ross K, McCarthy U, Huntly PJ, Wood BP, Stuart D, Rough EI, Smail DA, Bruno DW (1994) An outbreak of viral haemorrhagic septicaemia (VHS) in turbot (Scophthalmus maximus) in Scotland. Bull Eur Assoc Fish Pathol 14:213-214
22. Schlotfeldt HJ, Ahne W, Vestergard-Jorgensens PE, Glende W (1991) Occurrence of viral haemorrhagic septicaemia in turbot (Scophthalmus maximus) - a natural outbreak. Bull Eur Assoc Fish Pathol 11:105-107
23. Smail DA (2000). Isolation and identification of Viral Haemorrhagic Septicaemia (VHS) viruses from cod Gadus morhua with the ulcus syndrome and from haddock Melanogrammus aeglefinus having skin haemorrhages in the North Sea. Dis Aquat Org 41:231-235
24. Snow M, Smail, DA (1999). Experimental susceptibility of turbot Scophthalmus maximus to viral haemorrhagic septicaemia virus isolated from cultivated turbot. Dis Aquat Org 38:163-168
25. Snow M, Cunningham CO, Melvin WT, Kurath G (1999) Analysis of the nucleoprotein gene identifies distinct lineages of viral haemorrhagic septicaemia virus within the European marine environment. Virus Res 63:35-44
26. Snow M, Bain N, Black J, Taupin W, Cunningham CO, King JA, Skall HF, Raynard RS (2004) Genetic population structure of marine viral haemorrhagic septicaemia virus (VHSV). Dis Aquat Org 61:11-21
27. Stone DM, Way K, Dixon PF (1997) Nucleotide sequence of the glycoprotein gene of viral haemorrhagic septicaemia (VHS) viruses from different geographical areas: a link between VHS in farmed fish species and viruses isolated from North Sea cod (Gadus morhua L.) J Gen Virol 78: 1319-1326
28. Thiéry R, de Boisséson C, Jeffroy J, Castric J, de Kinkelin P, Benmansour A (2002) Phylogenetic analysis of viral haemorrhagic septicaemia virus (VHSV) isolates from France (1971-1999) Dis Aquat Org 52:29-37.
29. Troyer RM, LaPatra SE, Kurath G (2000) Genetic analyses reveal unusually high diversity of infectious haematopoietic necrosis virus in rainbow trout aquaculture. J Gen Virol 81:2823-2832
30. Vis ML, Carr SM, Bowering WR, Davidson WS (1997) Greenland halibut (Reinhardtius hippoglossoides) in the North Atlantic are genetically homogeneous. Can J Fish Aquat Sci 54(8):1813-1821
31. Watanabe L, Pakingking R, Iida H, Nishizawa T, Iida Y, Arimoto M, Muroga K (2002) Isolation of aquabirnavirus and viral hemorrhagic septicemia virus (VHSV) from wild marine fishes. Fish Pathol 37(4):189-191