Spectroscopic study of the interaction of actinomycin D with oligonucleotides carrying the central base sequences -XGCY- and -XGGCCY- using multivariate methods

Analytical and Bioanalytical Chemistry

Volumn 387, Issue 1, 2007, Pages 311-320

  Vives, M ^a   Tauler, R ^a   Eritja, R ^b   Gargallo, R ^c  

^a DEPARTMENT OF ENVIRONMENTAL CHEMISTRY   (Spain)

^b INSTITUT DE BIOLOGIA MOLECULAR DE BARCELONA   (Spain)

^c UNIVERSITY OF BARCELONA   (Spain)

Author keywords

Actinomycin D; Multivariate analysis; Multivariate curve resolution; Oligonucleotides; Spectroscopy

Indexed keywords

MOLECULAR DYNAMICS; MULTIVARIABLE SYSTEMS; NUCLEIC ACID SEQUENCES; SPECTROSCOPIC ANALYSIS; STOICHIOMETRY;

ACTINOMYCIN D; MULTIVARIATE ANALYSIS; MULTIVARIATE CURVE RESOLUTION; OLIGONUCLEOTIDES;

DRUG PRODUCTS;

DACTINOMYCIN; OLIGODEOXYRIBONUCLEOTIDE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; CIRCULAR DICHROISM; CONFORMATION; HEAT; NUCLEOTIDE SEQUENCE; PH; TITRIMETRY; TRANSITION TEMPERATURE; ULTRAVIOLET SPECTROPHOTOMETRY;

BASE SEQUENCE; CIRCULAR DICHROISM; DACTINOMYCIN; HEAT; HYDROGEN-ION CONCENTRATION; MOLECULAR STRUCTURE; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES; SPECTROPHOTOMETRY, ULTRAVIOLET; TITRIMETRY; TRANSITION TEMPERATURE;

EID: 33845660893     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-006-0946-8     Document Type: Article

References (25)

1. Chen F-M, Sha F, Chin K-H, Chou S-H (2003) Nucl Acids Res 31:4238-4246
2. Ning Z, Thomas LJ, Richard HS (1989) Biochemistry 28:5231-5239
3. Chen FM (1990) Biochemistry 29:7684-7690
4. Chen FM (1998) Biochemistry 37:3955-3964
5. Szczepanik W, Kaczmarek P, Jezowska-Bojczuk M (2004) J Inorg Biochem 98:2141-2148
6. Mergny J-L, Lacroix L (2003) Oligonucleotides 13:515-537
7. Owczarzy R (2005) Biophys Chem 117:207-215
8. Kjaersgaard IVH, Noerrelykke MR, Jessen F (2006) Proteomics 6:1606-1618
9. Kumar P, Venna A, Maiti S, Gargallo R, Chowdhury S (2005) Biochemistry 44:16426-16434
10. Notingher I, Jell G, Notingher PL, Bisson I, Tsigkou O, Polak JM, Stevens MM, Hench LL (2005) J Mol Struct 744-747:179-185
11. Wentzell PD, Karakach TK, Roy S, Martínez MJ, Allen CP, Werner-Washburne M (2006) BMC Bioinformatics 13:343
12. Jaumot J, Vives M, Gargallo R (2004) Anal Biochem 327:1-13
13. Gray DM, Hung SH, Johnson KH (1995) Methods Enzymol 216:19-34
14. Jaumot J, Avino A, Eritja R, Tauler R, Gargallo R (2003) J Biomol Struct Dyn 21:267-278
15. Dyson R, Kaderli S, Lawrence GA, Maeder M, Zuberbühler AD (1997) Anal Chim Acta 353:381-393
16. Tauler R, Smilde A, Kowalski B (1995) J Chemom 9:31-58
17. Jaumot J, Escaja N, Gargallo R, Gonzalez C, Pedroso E, Tauler R (2002) Nucleic Acids Res 30:e92
18. Gargallo R, Vives M, Tauler R, Eritja R (2001) Biophys J 81: 2886-2896
19. Bloomfield VA, Crothers DM, Tinoco I Jr (2000) Nucleic acids, Structures, properties and functions. University Science Books, Sausalito, CA
20. Cavalieri LF, Neunchin RG (1964) Biochem Biophys Acta 87:641-652
21. Ziffer H, Yamaoka K, Mauger AB (1968) Biochem 7:996-1001
22. Crothers DM, Sabol SL, Ratner DI, Mueller W (1968) Biochem 7:1817-1823
23. Angerman NS, Victor TA, Bell CL, Danyluk SS (1972) Biochem 11:2402-2411
24. Auer HE, Thompson TN (1978) Proc Natl Acad Sci USA 75:4729-4733
25. Chu W, Shinomiya M, Kamitori KY, Kamitori S, Carlson RG, Weaver RF, Takusagawa F (1994) J Am Chem Soc 116:7971-7982