Monitoring of stool microbiota in subjects with diarrhea indicates distortions in composition

Journal of Clinical Microbiology

Volumn 44, Issue 12, 2006, Pages 4550-4552

  Mai, Volker ^a   Braden, Christopher R ^b   Heckendorf, Jill ^a   Pironis, Baiba ^a   Hirshon, Jon Mark ^a  

^a UNIVERSITY OF MARYLAND SCHOOL OF MEDICINE   (United States)

^b NATIONAL CENTER FOR EMERGING AND ZOONOTIC INFECTIOUS DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

ARTICLE; BACTERIAL OVERGROWTH; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; CONTROLLED STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; DIARRHEA; ESCHERICHIA COLI; FECES MICROFLORA; HUMAN; NONHUMAN; POLYMERASE CHAIN REACTION; PREVALENCE; PRIORITY JOURNAL; SHIGELLA;

BACTERIA; BIODIVERSITY; DIARRHEA; DNA FINGERPRINTING; DNA, BACTERIAL; DNA, RIBOSOMAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FECES; GENES, RRNA; HUMANS; INTESTINES; NUCLEIC ACID DENATURATION; POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 16S;

BACTERIA (MICROORGANISMS);

EID: 33845579436     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.01542-06     Document Type: Article

References (12)

1. Cornick, N. A., A. F. Helgerson, V. Mai, J. M. Ritchie, and D. W. Acheson. 2006. In vivo transduction of an Stx-encoding phage in ruminants. Appl. Environ. Microbiol. 72:5086-5088.
2. De La Cochetiere, M. F., T. Durand, P. Lepage, A. Bourreille, J. P. Galmiche, and J. Dore. 2005. Resilience of the dominant human fecal microbiota upon short-course antibiotic challenge. J. Clin. Microbiol. 43:5588-5592.
3. Knarreborg, A., M. A. Simon, R. M. Engberg, B. B. Jensen, and G. W. Tannock. 2002. Effects of dietary fat source and subtherapeutic levels of antibiotic on the bacterial community in the ileum of broiler chickens at various ages. Appl. Environ. Microbiol. 68:5918-5924.
4. Mai, V., H. A. Katki, H. Harmsen, D. Gallaher, A. Schatzkin, D. J. Baer, and B. Clevidence. 2004. Effects of a controlled diet and black tea drinking on the fecal microflora composition and the fecal bile acid profile of human volunteers in a double-blinded randomized feeding study. J. Nutr. 134:473-478.
5. Manichanh, C., L. Rigottier-Gois, E. Bonnaud, K. Gloux, E. Pelletier, L. Frangeul, R. Nalin, C. Jarrin, P. Chardon, P. Marteau, J. Roca, and J. Dore. 2006. Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach. Gut 55:205-211.
6. Mead, P. S., L. Slutsker, V. Dietz, L. F. McCaig, J. S. Bresee, C. Shapiro, P. M. Griffin, and R. V. Tauxe. 1999. Food-related illness and death in the United States. Emerg. Infect. Dis. 5:607-625.
7. Nataro, J. P., V. Mai, J. Johnson, W. C. Blackwelder, R. Heimer, S. Tirrell, S. C. Edberg, C. R. Braden, M. J. Glenn, Jr., and J. M. Hirshon. 2006. Diarrheagenic Escherichia coli infection in Baltimore, Maryland, and New Haven, Connecticut. Clin. Infect. Dis. 43:402-407.
8. Slutsker, L., A. A. Ries, K. D. Greene, J. G. Wells, L. Hutwagner, and P. M. Griffin. 1997. Escherichia coli O157:H7 diarrhea in the United States: clinical and epidemiologic features. Ann. Intern. Med. 126:505-513.
9. Sullivan, A., C. Edlund, and C. E. Nord. 2001. Effect of antimicrobial agents on the ecological balance of human microflora. Lancet Infect. Dis. 1:101-114.
10. Talan, D., G. J. Moran, M. Newdow, S. Ong, W. R. Mower, J. Y. Nakase, R. W. Pinner, and L. Slutsker. 2001. Etiology of bloody diarrhea among patients presenting to United States emergency departments: prevalence of Escherichia coli O157:H7 and other enteropathogens. Clin. Infect. Dis. 32:573-580.
11. Yu, Z., and M. Morrison. 2004. Comparisons of different hypervariable regions of rrs genes for use in fingerprinting of microbial communities by PCR-denaturing gradient gel electrophoresis. Appl. Environ. Microbiol. 70:4800-4806.
12. Zoetendal, E. G., C. T. Collier, S. Koike, R. I. Mackie, and H. R. Gaskins. 2004. Molecular ecological analysis of the gastrointestinal microbiota: a review. J. Nutr. 134:465-472.