Radiation-induced phenotypic alterations in relation to isozymes and RAPD markers in Vigna radiata (L.) Wilczek

International Journal of Radiation Biology

Volumn 82, Issue 11, 2006, Pages 823-832

  Roy, Sumana ^a   Begum, Yasmin ^a   Chakraborty, Anindita ^b   Sen Raychaudhuri, Sarmistha ^a  

^a UNIVERSITY OF CALCUTTA   (India)

^b UGC DAE CONSORTIUM FOR SCIENTIFIC RESEARCH   (India)

Author keywords

Callus culture; Gamma rays; Peroxidase; Random amplified polymorphic DNA; Seedling injury; Superoxide dismutase; Vigna radiata

Indexed keywords

DNA MARKER; GENOMIC DNA; ISOENZYME; PEROXIDASE; SUPEROXIDE DISMUTASE;

ARTICLE; CALLUS CULTURE; CONTROLLED STUDY; DNA DETERMINATION; DNA EXTRACTION; ELECTROPHORESIS; ENZYME ACTIVITY; GAMMA RADIATION; GERMINATION; MOLECULAR WEIGHT; MUNG BEAN; NONHUMAN; PHENOTYPIC VARIATION; PLANT SEED; PRIORITY JOURNAL; RADIATION DOSE; RADIATION EXPOSURE; RANDOM AMPLIFIED POLYMORPHIC DNA; SEEDLING;

DNA DAMAGE; GERMINATION; ISOENZYMES; PEROXIDASES; PHENOTYPE; PLANTS; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SEEDLING; SUPEROXIDE DISMUTASE;

VIGNA RADIATA;

EID: 33845489509     PISSN: 09553002     EISSN: 13623095     Source Type: Journal    
DOI: 10.1080/09553000600969804     Document Type: Article

References (65)

1. Absalon MJ, Wu W, Kozarich JW, Stubbe J. 1995. Sequence-specific double-strand cleavage of DNA by Fe-Bleomycin. 2. Mechanism and dynamics. Biochemistry 34:2076-2086.
2. Akimova GP, Sokolova MG, Nechaeva L, Luzova GB, Sidorova KK. 2004. Peroxidase activity and pea roots sensitivity to Rhizobium infection. Academic Open Internet Journal 13:3.
3. Alscher RG, Erturk N, Heath LS. 2002. Role of superoxide dismutases (SODs) in controlling oxidative stress in plants. Journal of Experimental Botany 53:1331-1341.
4. Atienzar FA, Billinghurst Z, Depledge MH. 2002a. 4-n-Nonylphenol and 17-beta estradiol may induce common DNA effects in developing barnacle larvae. Environmental Pollution 120:735-738.
5. Atienzar FA, Evenden AJ, Jha AN, Depledge MH. 2002b. Use of random amplified polymorphic DNA damage and mutation: possible implication of confounding factors. Biomakers 7:94-101.
6. Betal S, Sen Raychaudhuri S. 1999. Micropropagation of the endangered aromatic varieties of Vigna radiata (L Wilczek) in West Bengal, India. In Vitro Cellular & Developmental Biology-Plant 35:76-78.
7. Betal S, Sen Raychaudhuri S. 2001. Shoot tip multiplication in aromatic and non aromatic varieties of Vigna radiata (L Wilczek). Plant Tissue Culture 11:187-194.
8. Betal S, Chakraborty P, Kundu S, Sen Raychaudhuri S. 2003. Estimation of genetic variability of Vigna radiata (L) Wilczek cultivars by RAPD analysis. Biologia Plantarum 48:205-209.
9. Bordo D, Djinovic K, Bolognesi M. 1994. Conserved patterns in the Cu,Zn superoxide dismutase family. Journal of Molecular Biology 238:366-386.
10. Caetano-Anolles G. 1994. MAAP: A versatile and universal tool for genome analysis. Plant Molecular Biology 25:1011-1026.
11. Castillo FJ. 1986. In: Extracellular peroxidases as markers of stress? Greppin H, Panel C, Gasper T, editors. Geneva: University of Geneva. pp 419-426.
12. Cipollini DF Jr. 1998. The induction of soluble peroxidase activity in bean leaves by wind-induced mechanical perturbation. American Journal of Botany 85:1586-1591.
13. Das nee' Pal M, Sen Raychaudhuri S. 2003/2004. Estimation of genetic variability in Plantago ovata cultivars. Biologia Plantarum 47:459-462.
14. De Marco A, Roubelakis-Angelakis KA. 1996. The complexity of enzymic control of hydrogen peroxide concentration may affect the regeneration potential of plant protoplasts. Plant Physiology 110:137-145.
15. Edward K, Johnston C, Thompson C. 1991. A simple and rapid method for the presentation of plant genomic DNA for PCR analysis. Nucleic Acids Research 19:1349.
16. + implantation. Science in China Series C 46:503-512.
17. El-baky A, Hanaa H, Amal MA, Hussein MM. 2003. Influence of salinity on lipid peroxidation, antioxidant enzymes and electrophoretic patterns of protein and in leaves of some onion cultivars. Asian Journal of Plant Sciences 2:1220-1227.
18. El-Farash EM, El-Enamy AE, Mazen A. 1993. Influence of genotype and NaCl on the levels of growth, proteins, proline, free amino acids, viability and protein regulation in tomato callus cultures. Physiologia Plantarum 4:345-352.
19. Foolad MR, Arulsekar S, Rodriguez RL. 1996. Applications of polymerase chain reaction (PCR) to plant genome analysis in plant cell tissue and organ culture. In: Gamborg OL, Phillips GC, editors. Fundamental methods. Narosa Publising House, New Delhi, London. pp 281-298.
20. Forrester HB, Radford IR. 1998. Detection and sequencing of ionizing radiation-induced DNA rearrangements using the inverse polymerase chain reaction. International Journal of Radiation Biology 74:1-15.
21. Frolova NP, Popova ON, Taskaev AI. 1991. Seed regeneration in a natural population of Plantago lanceolata L. in areas with different gamma background levels. Radiobiologia 31:167-170.
22. Frolova NP, Popova ON, Taskaev AI. 1993. A rise in the incidence of teratological changes in Plantago lanceolata L. seedlings of the 5th post-accident reproduction in the 30-kilometer area of the Chernobyl Atomic Electric Power Station. Radiobiologia 33:179-182.
23. Fu C, Qiu Y, Kong H. 2003. RAPD analysis for genetic diversity in Changium smyniodes (Apiaceae), an endangered plant. The Botanical Bulletin of Academia Sinica 44:13-18.
24. Geburek T, Wang Q. 1990. Inheritance of isozyme variants and their linkage relationships in Chinese fir (Cunninghamia lanceolata Hook). Euphytica 49:193-201.
25. Grasovsky AJ. 1999. Radiation-induced mutations in unirradiated DNA. Proceedings of the National Academy of Sciences, USA 96:5346-5347.
26. Herouart D, Van Montagu M, Inze D. 1993. Redox activated expression of the cytosolic copper/zinc superoxide dismutase gene in Nicotiana, Proceedings of the National Academy of Sciences, USA 90:3108-3112.
27. Herouart D, Van Montagu M, Inze D. 1994. Developmental and environmental regulation of the Nicotiana plumbaginifolia cytosolic Cu/Zn superoxide dismutase promoter in transgenic tobacco. Plant Physiology 104:873-880.
28. Kanematsu S, Asada K. 1990. Characteristic amino acid sequences of chloroplast and cytosol isozymes of CuZn-superoxide dismutase in spinach, rice and horsetail. Plant Cell Physiology 31:99-112.
29. Kesavan PC, Singh SP, Sah NK. 1991. Chemical modification of post-irradiation damage under varying oxygen concentrations in Barley seeds. International Journal of Radiation Biology 59:729-737.
30. Kim SD, Lee IS, Hyun DY. Jang CS, Song HS, Seo YW, Lee Y. 2003. Detection of DNA instability induced from tissue culture and irradiation in Oryza sativa L. by RAPD analysis. Journal of Plant Biotechnology 5:25-31.
31. Klotz KL, Lagrimini LM. 1996. Phytochrome control of the tobacco anionic peroxidase promoter. Plant Molecular Biology 31:565-573.
32. Krupa SV, Kickert RN. 1989. The greenhouse effect: The impact of carbondioxide, ultraviolet B radiation (UVB) and ozone on vegetation. Environmental Pollution 17:783-794.
33. Kuroda S, Yano H, Kogaban Y, Tabei Y, Takaiwa F, Kayano T, Tanaka H. 1999. Identification of DNA polymorphism induced by X-ray and UV irradiation in plant cells. Japan Agricultural Research Quarterly 33:223-226.
34. Liu MC. 1982. Effect of gamma irradiation on growth of callus and its differentiated plantlets in sugarcane. Nuclear Science Journal 19:208-215.
35. Lorenzini G, Bonatti PM, Nali C, Fornasiero RB. 1994. The protective effect of rust infection against ozone, sulphur dioxide and paraquat toxicities symptoms in broad bean. Physiological and Molecular Plant Pathology 45:263-279.
36. Lowry OH, Roserbrough NJ, Farr AL, Randall RJ. 1951. Protein measurement with folin phenol reagent. Journal of Biological Chemistry 193:265-275.
37. Manjunathan BR, Virupakshi S, Naik GR. 2003. Peroxidase isozyme polymorphism in popular sugarcane cultivars. Current Science 85:10.
38. McKersie BD, Bowley SR, Harjanto E, Leprince O. 1996. Water deficit tolerance and field performance of transgenic Alfalfa overexpressing superoxide dismutase 111:1177-1181.
39. Murashige T, Skoog F. 1962. A revised medium for rapid growth and bioassays with tobacco tissue culture. Physiologia Plantarum 15:473-495.
40. Perl Treves R, Galun E. 1991. The tomato Cu, Zn superoxide dismutase genes are developmentally regulated and respond to light and stress. Plant Molecular Biology 17:745-760.
41. Pramanik S. 1997. Cytochemical, cytological and biochemical studies on Plantago ovata Forsk. In tissue culture under normal and gamma irradiated conditions. PhD thesis, University of Calcutta.
42. Pramanik S, Chakraborty S, Sen Raychaudhuri S. 1995. In vitro clonal propagation and characterization of clonal regenerants of Plantago ovata Forsk by isozyme analysis. Cytobios 82:123-130.
43. Runeckles UC, Krupa SV. 1994. The impact of UV B radiation and ozone on terrestrial vegetation. Environmental Pollution 83:191-193.
44. Sah NK, Kesavan PC. 1987. Post irradiation modification of oxygen dependent and independent damage by catalase in barley seeds. International Journal of Radiation Biology 51:665-672.
45. Sah NK, Kesavan PC. 1996. Probing tenability of biochemical visa-vis physicochemical interpretations of modulation of radiation damage by caffeine and cysteine in barley. Indian Journal of Biochemistry and Biophysics 33:384-390.
46. Sah NK, Pramanik S, Sen Raychaudhuri S. 1996. Peroxidase changes in barley induced by ionizing and thermal radiation. International Journal of Radiation Biology 69:107-111.
47. Sareen S, Koul AK. 1991. Genetic diversity among Plantagos. XXVII. Effect of gamma rays on Plantago ovata Forsk. Indian Drugs 29:316-317.
48. SenGupta A, Heinen JL, Holaday AS, Burke JJ, Allen RD. 1993. Increased resistance to oxidative stress in transgenic plants that overexpress chloroplastic Cu/Zn superoxide dismutase. Proceedings of the National Academy of Sciences, USA 90:1629-1633.
49. Sen Raychaudhuri S, Deng XW. 2001. Role of superoxide dismutase in combating oxidative stress in higher plants. The Botanical Review 66:89-98.
50. Sharma RP, Mohapatra T. 1996. Molecular mapping and tagging of genes in crop plants. Genetica 97:313-320.
51. Singh SP, Kesavan PC. 1991. Biochemical effects of heat shock and caffeine on post-irradiation oxic and anoxic damage in barley seeds of low and higher water content. International Journal of Radiation Biology 59:1227-1236.
52. Smith MW, Doolittle RF. 1992. A comparison of evolutionary rates of the two major kinds of superoxide dismutases. Journal of Molecular Evolution 34:175-184.
53. StatSoft Inc. 1999. STATISTICA for Windows (computer programme manual). Tulsa, OK: StatSoft, Inc. 2300 East 14th Street, Tulsa, OK.
54. Tikku A, Singh SP, Kesavan PC. 1994. Effect of oxidative and non-oxidative pathways of radiation damage on peroxidase activity in barley seeds. Current Science 66:677-680.
55. Tsang EW, Bowler C, Herouart D, VanCamp W, Villarroel R, Genetello C, Van Montagu M, Inze D. 1991. Differential regulation of superoxide dismutases in plants exposed to environmental stress. Plant Cell 3:783-792.
56. Tsumura Y, Uchida K, Ohba K. 1989. Genetic control of isozyme variation in needle tissues of Cryptomeria japonica. Journal of Heredity 80:291-297.
57. Un-Haing C, YoungSohn J. 2002. Effect of 2,4,5-Trichloro biphenyl (PCB-29) on oxidative stress and activities of antioxidant enzymes in tomato seedlings. Korean Journal of Ecological Science 1:147-153.
58. Van Camp W, Capiau K., Van Montagu M, Inze D, Slooten L. 1996. Enhancement of oxidative stress tolerance in transgenic tobacco plants overproducing Fe-superoxide dismutase in chloroplasts. Plant Physiology 112:1703-1714.
59. Welsh J, McClelland M. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Research 18:7213-7218.
60. White JA, Plant S, Cannon RE, Wadsworth GJ, Scandalios JG. 1990. Developmental analysis of steady level of Cu/Zn and Mn superoxide dismutase mRNAs in maize tissues. Plant Cell Physiology 31:1163-1167.
61. Williams JGK, Kubelik AE, Levak KJ, Rafalski JA, Tingey SV. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18:6531-6535.
62. Yoo HY, Chang MS, Rho HM. 1999. The activation of the rat copper/zinc superoxide dismutase gene by hydrogen peroxide through the hydrogen peroxide-responsive element and by paraquat and heat shock through the same heat shock element. Journal of Biological Chemistry 274:23887-23892.
63. Zaka R, Vandecasteele CM, Misset MT. 2002. Effects of low chronic doses of ionizing radiation on anti-oxidant enzymes and G6PDH activities in Stipa capillata (Poaceae). Journal of Experimental Botany 53:1979-1987.
64. Zheng X, van Huystee RB. 1992. Peroxidase regulated elongation of segments from peanut hypocotyls. Plant Science 81:47-56.
65. Zhu D, Scandalios JG. 1993. Maize mitochondrial manganese superoxide dismutases are encoded by a differentially expressed multigene family. Proceedings of the National Academy of Sciences, USA 90:9310-9314.