Extreme mitochondrial sequence diversity in the intermediate schistosomiasis host Oncomelania hupensis robertsoni: Another case of ancestral polymorphism?

Malacologia

Volumn 48, Issue 1-2, 2006, Pages 143-157

  Wilke, Thomas ^a   Davis, George M ^b   Qiu, Dongchuan ^c   Spear, Robert C ^d  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

^b GEORGE WASHINGTON UNIVERSITY MEDICAL CENTER   (United States)

^c Sichuan Inst of Parasitic Diseases   (China)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

AFLP; China; Mitochondrial DNA; Oncomelania; Phylogeography; Schistosomiasis

Indexed keywords

GASTROPODA; ONCOMELANIA; ONCOMELANIA HUPENSIS; ONCOMELANIA HUPENSIS ROBERTSONI; RISSOOIDEA; SCHISTOSOMA JAPONICUM; SCHISTOSOMATIDAE; TREMATODA;

EID: 33845461917     PISSN: 00762997     EISSN: None     Source Type: Book Series    
DOI: None     Document Type: Review

References (58)

1. ATTWOOD, S. W. & D. A. JOHNSTON, 2001, Nucleotide sequence differences reveal genetic variation in Neotricula aperta (Gastropoda: Pomatiopsidae), the snail host of schistosomiasis in the lower Mekong Basin. Biological Journal of the Linnaean Society, 73: 23-41.
2. ATTWOOD, S. W., S. AMBU, X.-H. MENG, E. S. UPATHAM, F.-S. XU & V. R. SOUTHGATE, 2003, The phylogenetics of triculine snails (Rissooidea: Pomatiopsidae) from south-east Asia and southern China: historical biogeography and the transmission of human schistosomiasis. Journal of Molluscan Studies, 69: 263-271.
3. AVISE, J. C., 2000, Phylogeography. The history and formation of species. Harvard University Press, Cambridge, Massachusetts, USA, London, U.K.
4. BALLARD, J. W. O., B. CHERNOFF & A. C. JAMES, 2002, Divergence of mitochondrial DNA is not corroborated by nuclear DNA, morphology, or behavior in Drosophila simulans. Evolution, 56: 527-545.
5. BALLARD, J. W. O. & M. C. WHITLOCK, 2004, The incomplete natural history of mitochondria. Molecular Ecology, 13: 729-744.
6. BENSASSON, B., D.-X. ZHANG, D. L. HARTL & G. M. HEWITT, 2001, Mitochondrial pseudogenes: evolution's misplaced witnesses. Trends in Ecology & Evolution, 16: 314-321.
7. BENSCH, S. & M. ÅKESSON, 2005, Ten years of AFLP in ecology and evolution: why so few animals? Molecular Ecology, 14: 2899-2914.
8. DAVIS, G. M., 1992, Evolution of prosobranch snails transmitting Asian Schistosoma; coevolution with Schistosoma: a review. Progress in Clinical Parasitology, 3: 145-204.
9. DAVIS, G. M., T. WILKE, C. M. SPOLSKY, Y. ZHANG, M. Y. XIA & G. ROSENBERG, 1998, Cytochrome oxidase 1-based phylogenetic relationships among the Hydrobiidae, Pomatiopsidae, Rissoidae, and Truncatellidae (Gastropoda: Prosobranchia: Rissoacea). Malacologia, 40: 251-266.
10. DAVIS, G. M., T. WILKE, Y. ZHANG, X. J. XU, C. P. QUI, C. M. SPOLSKY, D. C. QUI, Y. LI, M. Y. XIA & Z. FENG, 1999, Snail-Schistosoma, Paragonimus interaction in China: population ecology, genetic diversity, coevolution and emerging diseases. Malacologia, 41: 355-377.
11. DAVIS, G. M., Y. ZHANG, Y. H. GUO & C. M. SPOLSKY, 1995, Population genetics and systematic status of Oncomelania hupensis (Gastropoda: Pomatiopsidae) throughout China. Malacologia, 37: 133-156.
12. FARRIS, J. S., M. KÄLLERSJÖ, A. G. KLUGE & C. BULT, 1995, Testing significance of incongruence. Cladistics, 10: 315-319.
13. FOLMER, O., M. BLACK, W. HOEH, R. A. LUTZ & R. C. VRIJENHOEK, 1994, DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3: 294-299.
14. FU, Y. X. & W. H. LI, 1993, Statistical tests of neutrality of mutations. Genetics, 133: 693-709.
15. FUJINO, T., B. FRIED & S. TAKAMIYA, 1995, Cytochemical localisation of cytochrome c oxidase activity in mitochondria in the tegument and tegumental and parenchymal cells of the trematodes Echinostoma trivolvis, Zygocotyle lunata, Schistosoma mansoni, Fasciola gigantica and Paragonimus ohirai. Journal of Heminthology, 69: 195-201.
16. HALL, T. A., 1999, BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41: 95-98.
17. HERSHLER, R., M. MULVEY & H.-P. LUI, 1999, Biogeography in the Death Valley region: evidence from springsnails (Hydrobiidae: Tryonia). Zoological Journal of the Linnean Society, 126: 335-354
18. HEWITT, G. M., 2000, The genetic legacy of quaternary ice ages. Nature, 405: 907-913.
19. HILLIS, D. M., B. K. MABLE & C. MORITZ, 1996, Applications of molecular systematics. Pp. 515-543, in: D. M. HILLIS, C. MORITZ & B. K. MABLE, eds., Molecular systematics, 2. Edition, Sinauer Associates Inc., Sunderland.
20. HOARAU, G., S. HOLLA, R. LESCASSE, W. T. STAM & J. L. OLSEN, 2002, Heteroplasmy and evidence for recombination in the mitochondrial control region of the flatfish Platichthys flesus. Molecular Biology and Evolution, 19: 2261-2264.
21. HOEH, W. R., K. H. BLAKLEY & W. M. BROWN, 1991, Heteroplasmy suggests limited biparental inheritance of Mytilus mitochondrial DNA. Science, 251: 1488-1490.
22. HUELSENBECK, J. P., 1995, Performance of phylogenetic methods in simulation. Systematic Biology, 44(1), 17-48.
23. HUELSENBECK, J. P. & F. RONQUIST, 2001, MRBAYES: Bayesian inference of phylogeny. Bioinformatics, 17: 754-755.
24. INOUE, J. G., M. MIYA, K. TSUKAMOTO & M. NISHIDA, 2003, Gene rearrangements originated within the eels. Molecular Biology and Evolution, 20(11): 1917-1924.
25. JURBERG, P., R. A. CUNHA & M. L. RODRIGUES, 1997, Behavior of Biomphalaria glabrata Say, 1818 (Gastropoda: Planorbidae) - I. Morphophysiology of the mantle cavity. Memorias do Instituto Oswaldo Cruz, 92(2): 287-295.
26. KOLACZKOWSKI, B. & J. W. THORNTON, 2004, Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous. Nature, 431: 980-984.
27. KUMAR, S., K. KOICHIRO, I. JAKOBSEN & M. NEI, 2000, MEGA: Molecular evolutionary genetics analysis, version 2.0. Pennsylvania State University, University Park, and Arizona State University, Tempe.
28. LOPEZ, J. V., N. YUHKI, R. MASUDA, W. S. MODI & S. J. O'BRIEN, 1994, Numt: a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat. Journal of Molecular Evolution, 39: 174-190.
29. MOORE, W. S., 1995, Inferring phylogenies from mtDNA variation: mitochondrial gene trees versus nuclear gene trees. Evolution, 49: 718-726.
30. MORITZ, C. & W. M. BROWN, 1987, Tandem duplications in animal mitochondrial DNAs: Variation in incidence and gene content among lizards. Proceedings of the National Academy of Sciences (USA), 84: 7183-7187.
31. PAGE, R. D. M., 2000, Extracting species trees from complex gene trees: reconciled trees and vertebrate phylogeny. Molecular Phylogenetics and Evolution, 14: 89-106.
32. PALUMBI, S., A. MARTIN, S. ROMANO, W. O. MCMILLIAN, L. STICE & G. GRABOWSKI, 1991, The simple fool's guide to PCR. University of Hawaii, Honolulu.
33. PFENNINGER, M. & D. POSADA, 2002, Phylogeographic history of the land snail Candidula unifasciata (Poiret 1801) (Helicellinae, Stylommatophora): fragmentation, corridor migration and secondary contact. Evolution, 56(9): 1776-1788.
34. PONDER, W. F., P. EGGLER & D. J. COLGAN, 1995, Genetic differentiation of aquatic snails (Gastropoda: Hydrobiidae) from artesian springs in arid Australia. Biological Journal of the Linnean Society, 56: 553-596.
35. POSADA, D. & K. A. CRANDALL, 1998, Modeltest: testing the model of DNA substitution. Bioinformatics, 14: 817-818.
36. POSADA, D. & K. A. CRANDALL, 2001, Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology & Evolution 16: 37-45.
37. RAMBAUT, A. & N. C. GRASSLY, 1997, SeqGen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees, Version 1.1. Computer Applications in the Biosciences, 13: 235-238.
38. ROZAS, J. & R. ROZAS, 1999, DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics, 15: 174-175.
39. SCHNEIDER, S., D. ROESSLI & L. EXCOFFIER, 2000, Arlequin: a software for population genetics data analysis. Ver. 2.000. Genetics and Biometry Lab, Dept. of Anthropology, University of Geneva.
40. SHI, C. H., T. WILKE, G. M. DAVIS, M. Y. XIA & C. P. QIU, 2002, Population genetics, microphylogeography, ecology, and susceptibility to schistosome infection of Chinese Oncomelania hupensis hupensis (Gastropoda: Rissooidea: Pomatiopsidae) in the Miao River system. Malacologia, 44(2): 333-347.
41. SPOLSKY, C. M., G. M. DAVIS & Y. ZHANG, 1996, Sequencing methodology and phylogenetic analysis: cytochrome b gene sequence reveals significant diversity in Chinese populations of Oncomelania (Gastropoda: Pomatiopsidae). Malacologia, 38: 213-221.
42. STEEL, D. J., S. A. TREWICK & G. P. WALLIS, 2000, Heteroplasmy of mitochondrial DNA in the ophiuroid Astrobrachion constrictum. The Journal of Heredity, 91(2): 146-149.
43. SWOFFORD, D. L., 2002, PAUP*. Phylogenetic analysis using parsimony (* and other methods). Version 4. Sinauer Associates Inc., Sunderland.
44. TABERLET, P., L. FUMAGALLI, A. G. WUSTSAUCY & J. F. COSSON, 1998, Comparative phylogeography and postglacial colonisation routes in Europe. Molecular Ecology, 7: 453-464.
45. THOMPSON, J. D., T. J. GIBSON, F. PLEWNIAK, F. JEANMOUGIN & D. G. HIGGINS, 1997, The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24: 4876-4882.
46. TURELLI, M. & A. A. HOFFMANN, 1995, Cytoplasmic incompatibility in Drosophila simulans: dynamics and parameter estimates from natural populations. Genetics 140: 1319-1338.
47. VAN HELLEMOND, J. J., M. KLOCKIEWICZ, C. P. GAASENBEEK, M. H. ROOS & A. G. M. Tielens, 1995, Rhodoquinone and complex II of the electron-transport chain in anaerobically functioning eukaryotes. The Journal of Biological Chemistry, 270: 31 065-31 070.
48. VAN HELLEMOND, J. J., A. VAN DER KLEI, S. W. H. VAN WEELDEN & A. G. M. TIELENS, 2003, Biochemical and evolutionary aspects of anaerobically functioning mitochondria. Philosophical Transactions of the Royal Society of London, (Ser. B) 358: 205-215.
49. VAN HERWERDEN, L., D. BLAIR & T. AGATSUMA, 2000, Multiple lineages of the mitochondrial gene NADH dehydrogenase subunit 1 (ND1) in parasitic helminths: Implications for molecular evolutionary studies of facultatively anaerobic eukaryotes. Journal of Molecular Evolution, 51: 339-352.
50. WIENS, J. J. & M. R. SERVEDIO, 1998, Phylogenetic analysis and intraspecific variation: performance of parsimony, likelihood, and distance methods. Systematic Biology, 47: 228-253
51. WILKE, T., 2003, Salenthydrobia n.gen. (Rissooidea: Hydrobiidae): a potential relict of the Messinian salinity crisis. Zoological Journal of the Linnean Society, 137(2): 319-336.
52. WILKE, T., G. M. DAVIS, C. E. CHEN, X. N. ZHOU, X. P. ZENG, Y. ZHANG & C. M. SPOLSKY, 2000a, Oncomelania hupensis (Gastropoda: Rissooidea) in eastern China: molecular phylogeny, population structure, and ecology. Acta Tropica, 77: 215-227.
53. WILKE, T. & M. PFENNINGER, 2002, Separating historic events from recurrent processes in cryptic species: phylogeography of mud snails (Hydrobia spp.). Molecular Ecology, 11(8): 1439-1451.
54. WILKE, T., E. ROLAN & G. M. DAVIS, 2000b, The mudsnail genus Hydrobia s.s. in the northern Atlantic and western Mediterranean: a phylogenetic hypothesis. Marine Biology, 137: 827-833.
55. XIA, X. & Z. XIE, 2001, DAMBE: Software package for data analysis in molecular biology and evolution. The Journal of Heredity, 92: 371-373.
56. XIA, X., Z. XIE, M. SALEMI, L. CHEN & Y. WANG, 2003, An index of substitution saturation and its application. Molecular Phylogenetics and Evolution, 26: 1-7.
57. ZHANG, D.-X. & G. M. HEWITT, 1996, Nuclear integrations: challenges for mitochondrial DNA markers. Trends in Ecology and Evolution, 11: 247-251.
58. ZOUROS, E., A. O. BALL, C. SAAVEDRA & K. R. FREEMAN, 1994, An unusual type of mitochondrial DNA inheritance in the blue mussel Mytilus. Proceedings of the National Academy of Sciences (USA), 91: 7463-7467.