Differential effect of algal- and soil-derived dissolved organic matter on alpine lake bacterial community composition and activity

Limnology and Oceanography

Volumn 51, Issue 6, 2006, Pages 2527-2537

  Pérez, María Teresa ^a   Sommaruga, Ruben ^a  

^a UNIVERSITY OF INNSBRUCK   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

ALGA; ALPINE ENVIRONMENT; BACTERIOPLANKTON; COMMUNITY COMPOSITION; DISSOLVED ORGANIC CARBON; DISSOLVED ORGANIC MATTER; HETEROTROPHY; LAKE; MICROBIAL ACTIVITY; NUTRIENT ENRICHMENT; RELATIVE ABUNDANCE; SOIL ORGANIC MATTER;

ACTINOBACTERIA; ALGAE; BACTERIA (MICROORGANISMS); BETAPROTEOBACTERIA;

EID: 33845394386     PISSN: 00243590     EISSN: None     Source Type: Journal    
DOI: 10.4319/lo.2006.51.6.2527     Document Type: Article

References (49)

1. ALFREIDER, A., J. PERNTHALER, R. AMANN, B. SATTLER, F. O. GLÖCKNER, A. WILLE, AND R. PSENNER. 1996. Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high mountain lake using in situ hybridization. Appl. Environ. Microbiol. 62: 2138-2144.
2. AMMERMAN, J. W., J. A. FUHRMAN, A. HAGSTRÖM, AND F. AZAM. 1984. Bacterioplankton growth in sea water: I. Growth kinetics and cellular characteristics in seawater cultures. Mar. Ecol. Prog. Ser. 18: 31-39.
3. ARRIETA, J. M., AND G. J. HERNDL. 2002. Changes in bacterial β-glucosidase diversity during a coastal phytoplankton bloom. Limnol. Oceanogr. 47: 594-599.
4. BENISTON, M. 2000. Environmental change in mountains and uplands. Arnold.
5. BENNER, R. 2002. Chemical composition and reactivity, p. 59-90. In D. A. Hansell and C. A. Carlson [eds.], Biogeochemistry of marine dissolved organic matter. Academic Press.
6. _. 2003. Molecular indicators of bioavailability of dissolved organic matter, p. 121-137. In S. E. G. Findlay and R. L. Sinsabaugh [eds.], Aquatic ecosystems: Interactivity of dissolved organic matter. Academic Press.
7. BURKERT, U., F. WARNECKE, D. BABENZIEN, E. ZWIRNMANN, AND J. PERNTHALER. 2003. Members of a readily enriched β-proteobacterial clade are common in surface waters of a humic lake. Appl. Environ. Microbiol. 69: 6550-6559.
8. COTTRELL, M. T., AND D. L. KIRCHMAN. 2000. Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low and high molecular weight dissolved organic matter. Appl. Environ. Microbiol. 66: 1692-1697.
9. CRUMP, B. C., G. W. KLING, M. BAHR, AND J. E. HOBBIE. 2003. Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl. Environ. Microbiol. 69: 2253-2268.
10. DEL GIORGIO, P. A., AND J. DAVIS. 2003. Patterns in dissolved organic matter lability and consumption across aquatic ecosystems, p. 400-425. In D. L. Findlay and R. L. Sinsabaugh [eds.], Aquatic ecosystems: Interactivity of dissolved organic matter. Academic Press.
11. ELIFANTZ, H., R. R. MALMSTROM, M. T. COTTRELL, AND D. L. KIRCHMAN. 2005. Assimilation of polysaccharides and glucose by major bacterial groups in the Delaware estuary. Appl. Environ. Microbiol. 71: 7799-7805.
12. FUCHS, B. M., M. V. ZUBKOV, K. SAHM, P. H. BURKILL, AND R. AMANN. 2000. Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques. Environ. Microbiol. 2: 191-201.
13. GLÖCKNER, F. O., B. M. FUCHS, AND R. AMANN. 1999. Bacterioplankton compositions of lakes and oceans: First comparison based on fluorescence in situ hybridization. Appl. Environ. Microbiol. 65: 3721-3726.
14. _, E. ZAICHIKOV, N. BELKOVA, L. DENISSOVA, J. PERNTHALER, A. PERNTHALER, AND R. AMANN. 2000. Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria. Appl. Environ. Microbiol. 66: 5053-5065.
15. GRABHERR, G., M. GOTFRIED, AND H. PAULI. 1994. Climate effects on mountain plants. Nature 369: 448.
16. HAHN, M. W., H. LÜNSDORF, Q. WU, M. SCHAUER, M. G. HÖFLE, J. BOENIGK, AND P. STADLER. 2003. Isolation of novel ultramicrobacteria classified as Actinobacteria from five freshwater habitats in Europe and Asia. Appl. Environ. Microbiol. 69: 1442-1451.
17. HAUER, F. R., AND OTHERS. 1997. Assessment of climate change and freshwater ecosystems of the Rocky Mountains, USA and Canada. Hydrol. Process. 11: 903-924.
18. HEDGES, J. I. 1992. Global biogeochemical cycles: Progress and problems. Mar. Chem. 39: 67-93.
19. HICKMAN, M., AND M. A. REASONER. 1994. Diatom response to late Quaternary vegetation and climate change, and to deposition of two tephras in an alpine lake and a sub-alpine lake in Yoho National Park, British Columbia. J. Paleolimnol. 11: 173-188.
20. HOFER, J., AND R. SOMMARUGA. 2001. Seasonal dynamics of viruses in an alpine lake: Importance of filamentous forms. Aquat. Microb. Ecol. 26: 1-11.
21. HORNAK, K., M. MASÍN, J. JEZBERA, Y. BETTAREL, J. NEDOMA, T. SIME-NGANDO, AND K.ŠIMEK. 2005. Effects of decreased resource availability, protozoan grazing and viral impact on a structure of bacterioplankton assemblage in a canyon-shaped reservoir. FEMS Microb. Ecol. 52: 315-327.
22. JÜRGENS, K., J. PERNTHALER, S. SCHALLA, AND R. AMANN. 1999. Morphological and compositional changes in planktonic bacterial community in response to enhanced protozoan grazing. Appl. Environ. Microbiol. 65: 1241-1250.
23. KABLITZ, K., J. SCHMERWITZ, D. SCHWESIG, AND E. MATZNER. 2003. Biodegradation of soil-derived dissolved organic matter as related to its properties. Geoderma 113: 273-291.
24. KIRCHMAN, D. L. 2000. Uptake and regeneration of inorganic nutrients by marine heterotrophic bacteria, p. 261-288. In D. L. Kirchman [ed.], Microbial ecology of the oceans. Wiley-Liss.
25. _. 2002. The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microb. Ecol. 39: 91-100.
26. _, A. I. DITTEL, S. E. G. FINDLAY, AND D. FISCHER. 2004. Changes in bacterial activity and community structure in response to dissolve organic matter in the Hudson River, New York. Aquat. Microb. Ecol. 35: 243-257.
27. _, H. W. DUCKLOW, AND R. MITCHELL. 1982. Estimates of bacterial growth from changes in uptake rates and biomass. Appl. Environ. Microbiol. 44: 1296-1307.
28. MALMSTROM, R. R., M. T. COTTRELL, H. ELIFANTZ, AND D. L. KIRCHMAN. 2005. Biomass production and assimilation of dissolved organic matter by SAR11 bacteria in the Northwest Atlantic Ocean. Appl. Environ. Microbiol. 71: 2979-2986.
29. MARTINEZ, J., D. C. SMITH, G. F. STEWARD, AND F. AZAM. 1996. Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate processing in the sea. Aquat. Microb. Ecol. 10: 223-230.
30. MCKNIGHT, D. M., E. D. ANDREWS, S. A. SPAULDING, AND G. R. AIKEN. 1994. Aquatic fulvic acids in algal-rich Antarctic ponds. Limnol. Oceanogr. 39: 1972-1979.
31. PECHLANER, R. 1971. Factors that control the production rate and biomass of phytoplankton in high-mountain lakes. Mitt. Internat. Verein. Limnol. 19: 125-145.
32. PERNTHALER, A., J. PERNTHALER, AND R. AMANN. 2002. Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria. Appl. Environ. Microbiol. 68: 3094-3101.
33. PERNTHALER, J., F. O. GLÖCKNER, S. UNTERHOLZNER, A. ALFREIDER, R. PSENNER, AND R. AMANN. 1998. Seasonal community and population dynamics of pelagic bacteria and archaea in a high mountain lake. Appl. Environ. Microbiol. 64: 4299-4306.
34. SANDERS, R. W., D. A. CARON, AND U.-G. BERNINGER. 1992. Relationships between bacteria and heterotrophic nanoplankton in marine and fresh waters: an inter-ecosystem comparison. Mar. Ecol. Prog. Ser. 86: 1-14.
35. SEKAR, R., A. PERNTHALER, J. PERNTHALER, F. WARNECKE, T. POSCH, AND R. AMANN. 2003. An improved method for quantification of freshwater Actinobacteria by fluorescence in situ hybridization. Appl. Environ. Microbiol. 69: 2928-2935.
36. ŠIMEK, K., K. HORNÁK, J. JEZBERA, M. MASÍN, J. NEDOMA, J. M. GASOL, AND M. SCHAUER. 2005. Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of β-Proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Appl. Environ. Microbiol. 71: 2381-2390.
37. _, M. MASÍN, U. CHRISTAKI, J. NEDOMA, M. G. WEINBAUER, AND J. R. DOLAN. 2003. Comparing the effects of resource enrichment and grazing on a bacterioplankton community of a meso-eutrophic reservoir. Aquat. Microb. Ecol. 31: 123-135.
38. _, AND OTHERS. 2001. Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl. Environ. Microbiol. 67: 2723-2733.
39. SIMON, M., AND F. AZAM. 1989. Protein content and protein synthesis rates of planktonic marine bacteria. Mar. Ecol. Prog. Ser. 51: 201-213.
40. SMITH, E. M., AND Y. T. PRAIRIE. 2004. Bacterial metabolism and growth efficiency in lakes: The importance of phosphorus availability. Limnol. Oceanogr. 49: 137-147.
41. SOMMARUGA, R. 2001. The role of solar UV radiation in the ecology of alpine lakes. J. Photochem. Photobiol. B-Biol. 62: 35-42.
42. _, AND G. AUGUSTIN. 2006. Seasonality in UV transparency of an alpine lake is associated to changes in phytoplankton biomass. Aquat. Sci. 68: 129-141.
43. _, R. PSENNER, E. SCHAFFERER, K. A. KOINIG, AND S. SOMMARUGA- WÖGRATH. 1999. Dissolved organic carbon concentration and phytoplankton biomass in high-mountain lakes of the Austrian Alps: Potential effect of climatic warming on UV underwater attenuation. Arct. Antarct. Alp. Res. 31: 247-253.
44. STROME, D. J., AND M. C. MILLER. 1978. Photolytic changes in dissolved humic substances. Verb. Internat. Verein. Limnol. 20: 1248-1254.
45. TEIRA, E., T. REINTHALER, A. PERNTHALER, J. PERNTHALER, AND G. J. HERNDL. 2004. Combining catalyzed reporter deposition-fluorescence in situ hybridization and microautoradiography to detect substrate utilization by bacteria and archaea in the deep ocean. Appl. Environ. Microbiol. 70: 4411-4414.
46. TURNER, B. L., I. D. MCKELVIE, AND P. M. HAYGARTH. 2002. Characterisation of water-extractable soil organic phosphorous by phosphatase hydrolysis. Soil Biol. Biochem. 34: 27-35.
47. WARNECKE, F., R. AMANN, AND J. PERNTHALER. 2004. Actinobacterial 16s rRNA genes from freshwater habitats cluster in four distinct lineages. Environ. Microbiol. 6: 242-258.
48. _, R. SOMMARUGA, R. SEKAR, J. S. HOFER, AND J. PERNTHALER. 2005. Abundances, identity and growth state of Actinobacteria in mountain lakes of different UV transparency. Appl. Environ. Microbiol. 71: 5551-5559.
49. YOKOKAWA, T., T. NAGATA, M. T. COTTRELL, AND D. L. KIRCHMAN. 2004. Growth rate of the major phylogenetic bacterial groups in the Delaware estuary. Limnol. Oceanogr. 49: 1620-1629.