Delimitation of Amaranthus cruentus L. and Amaranthus caudatus L. using micromorphology and AFLP analysis: An application in germplasm identification

Genetic Resources and Crop Evolution

Volumn 53, Issue 8, 2006, Pages 1625-1633

  Costea, M ^a   Brenner, D M ^b   Tardif, F J ^c   Tan, Y F ^d   Sun, M ^d  

^a WILFRID LAURIER UNIVERSITY   (Canada)

^b IOWA STATE UNIVERSITY   (United States)

^c UNIVERSITY OF GUELPH   (Canada)

^d UNIVERSITY OF HONG KONG   (Hong Kong)

Author keywords

AFLP; Amaranthus caudatus; Amaranthus cruentus; Germplasm identification; Grain amaranths; Micromorphology

Indexed keywords

ANGIOSPERM; GENETIC ANALYSIS; GENETIC VARIATION; GERMPLASM; IDENTIFICATION KEY; MICROMORPHOLOGY; PHYLOGENETICS; TAXONOMY;

AMARANTHUS; AMARANTHUS CAUDATUS; AMARANTHUS CRUENTUS; AMARANTHUS HYPOCHONDRIACUS;

EID: 33845353895     PISSN: 09259864     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10722-005-2288-3     Document Type: Article

References (22)

1. Brenner D.M., Baltensperger D.D., Kulakow P.A., Lehmann J.W., Myers R.L., Slabbert M.M. and Sleugh B.B. 2000. Genetic resources and breeding of Amaranthus. Plant Breed. Rev. 19: 227-285.
2. Busso C.S., Devos K.M., Ross G., Mortimore M., Adams W.M., Ambrose M.J., Alldrick S. and Gale M.D. 2000. Genetic diversity within and among landraces of pearl millet (Pennisetum glaucum) under farmer management in West Africa. Genet. Resour. Crop Evol. 47: 561-568.
3. Cai Y., Sun M. and Corke H. 1998. Colorant properties and stability of Amaranthus betacyanin pigments. J. Agric. Food. Chem. 46: 4491-4495.
4. Chan K.F. and Sun M. 1997. Genetic diversity detected by isozyme and RAPD analysis of crop and wild species of Amaranthus. Theor. Appl. Genet. 95: 865-873.
5. Cheng Z., Lu B.-R., Sameshima K., Fu D.-X. and Chen J.-K. 2004. Identification and genetic relationships of kenaf (Hibiscus cannabinus L.) germplasm revealed by AFLP analysis. Genet. Resour. Crop Evol. 51: 393-401.
6. Costea M., Sanders A. and Waines G. 2001. Preliminary results toward a revision of the Amaranthus hybridus species complex (Amaranthaceae). Sida 19: 931-974.
7. Dehmer K.J. and Hammer K. 2004. Taxonomic status and geographic provenance of germplasm accessions in the Solanum nigrum L. complex: AFLP data. Genet. Resour. Crop Evol. 51: 551-558.
8. Hansen L.B., Siegismund H.R. and Jørgensen R.B. 2001. Introgression between oilseed rape (Brassica napus L.) and its weedy relative B. rapa L. in a natural population. Genet. Resour. Crop Evol. 48: 621-627.
9. Huang J. and Sun M. 1999. A modified AFLP with fluorescence-labeled primers and automated DNA sequencer detection for efficient fingerprinting analysis in plants. Biotechnol. Tech. 13: 277-278.
10. Huang J., Corke H. and Sun M. 2002. Highly polymorphic AFLP markers as a complementary tool to ITS sequences in assessing genetic diversity and phylogenetic relationships of sweetpotato (Ipomoea batatas (L.) Lam.) and its wild relatives. Genet. Resour. Crop Evol. 49: 541-550.
11. Jones C.J., Edwards K.J., Castaglione S., Winfield M.O., Sale F., de Wiel C., Bredemeijer G., Vosman B., Matthes M., Daly, A., Brettschneider R., Bettini P., Buiatti M., Maestri E., Malcevshi A., Marmiroli N., Aert R., Volckaert G., Rueda J., Linacero R., Vazquez A. and Karp A. 1997. Reproducibility of RAPD, AFLP and SSR markers in plants by a network of European laboratories. Mol. Breed. 3: 381-390.
12. Lanoue K.Z., Wolf P.G., Browning S. and Hood E.E. 1996. Phylogenetic analysis of restriction-site variation in wild and cultivated Amaranthus species (Amaranthaceae). Theor. Appl. Genet. 93: 722-732.
13. Lin J.J., Kuo J., Ma J., Saunders J.A., Beard H.S., MacDonald M.H., Kenworthy W., Ude G.N. and Matthews B.F. 1996. Identification of molecular markers in soybean comparing RFLP, RAPD, and AFLP DNA mapping techniques. Plant Mol. Biol. Report 14: 156-169.
14. Nei M. and Li W.-H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 76: 5269-5273.
15. Pandey R.M. 1999. Evolution and improvement of cultivated amaranths with reference to genome relationship among A. cruentus, A. powellii and A. retroflexus. Genet. Resour. Crop Evol. 46: 219-224.
16. Seman K., Bjornstad A. and Stedje B. 2003. Genetic diversity and differentiation in Ethiopian populations of Phytolacca dodecandra as revealed by AFLP and RAPD analyses. Genet. Resour. Crop Evol. 50: 649-661.
17. Swofford D.L. 2001. PAUP*. Phylogenetic Analysis Using Parsimony (and Other Methods). Beta version 4.0b10. Sinauer Associates, Sunderland, Massachusetts.
18. Transue D.K., Fairbanks D.J., Robison L.R. and Andersen W.R. 1994. Species identification of RAPD analysis of grain amaranth genetic resources. Crop Sci. 34: 1385-1389.
19. van Treuren R. and van Hintum T.J.L. 2001. Identification of intra-accession genetic diversity in selfing crops using AFLP markers: implications for collection management. Genet. Resour. Crop Evol. 48: 287-295.
20. van Treuren R., Magda A., Hoekstra R. and van Hintum T.J.L. 2004. Genetic and economic aspects of marker-assisted reduction of redundancy from a wild potato germplasm collection. Genet. Resour. Crop Evol. 51: 277-290.
21. Vos P., Hogers R., Bleeker M., Rijans M., de Lee T., Hornes M., Frijters A., Pot J., Peleman J., Kuiper M. and Zabeau M. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23: 4407-4414.
22. Xu F. and Sun M. 2001. Comparative analysis of phylogenetic relationships of grain amaranths and their wild relatives (Amaranthus; Amaranthaceae) using internal transcribed spacer, amplified fragment length polymorphism, and double-primer fluorescent intersimple sequence repeat markers. Mol. Phylogenet. Evol. 21: 372-387.