Detection and characterization of human group C rotavirus in the pediatric population of Barcelona, Spain

Journal of Clinical Virology

Volumn 38, Issue 1, 2007, Pages 78-82

  Abid, Islem ^a   Guix, Susana ^a   Aouni, Mahjoub ^b   Pintó, Rosa ^a   Bosch, Albert ^a  

^a UNIVERSITY OF BARCELONA   (Spain)

^b UNIVERSITY OF MONASTIR   (Tunisia)

Author keywords

Capsid protein sequences; Human group C rotavirus; Internal positive control; Molecular epidemiology; Phylogenetic analysis

Indexed keywords

AFRICA SOUTH OF THE SAHARA; AMINO ACID SEQUENCE; ARTICLE; CONTROLLED STUDY; DATA ANALYSIS; EUROPE; FECES ANALYSIS; HUMAN; HUMAN ROTAVIRUS; INFANT; INFANTILE DIARRHEA; MAJOR CLINICAL STUDY; NEWBORN; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA VIRUS; ROTAVIRUS C; SAMPLE; SOUTHERN BLOTTING; SPAIN; VIRUS CAPSID; VIRUS DETECTION; VIRUS INFECTION; VIRUS ISOLATION; VIRUS STRAIN;

ANTIGENS, VIRAL; BLOTTING, SOUTHERN; CAPSID PROTEINS; CHILD; CHILD, PRESCHOOL; EPIDEMIOLOGY, MOLECULAR; GENES, VIRAL; HUMANS; INFANT; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; ROTAVIRUS; ROTAVIRUS INFECTIONS; SEQUENCE HOMOLOGY, AMINO ACID; SPAIN; SPECIES SPECIFICITY; URBAN POPULATION; VARIATION (GENETICS);

EID: 33845292561     PISSN: 13866532     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jcv.2006.09.012     Document Type: Article

References (24)

1. Adah M.I., Wade A., Oseto M., Kuzuya M., and Taniguchi K. Detection of human group C rotavirus in Nigeria and sequence analysis of their genes encoding VP4, VP6, and VP7 proteins. J Med Virol 66 (2002) 269-275
2. Bishop R.F., Davidson G.P., Holmes I.H., and Ruck B.J. Virus particles in epithelial cells of duodenal mucosa from children with acute non-bacterial gastroenteritis. Lancet 2 (1973) 1281-1283
3. Boom R., Sol C.J.A., Salimans M.M.M., Jansen C.L., Wertheim-van Dillen P.M.E., and Van der noordaa J. Rapid and simple method for purification of nucleic acids. J Clin Microbiol 28 (1990) 495-503
4. Castello A.A., Arguelles M.H., Villegas G.A., Olthoff A., and Glikmann G. Incidence and prevalence of human group C rotavirus infections in Argentina. J Med Virol 67 (2002) 106-112
5. Chikhi-Brachet R., Bon F., Toubiana L., Pothier P., Nicolas J.C., Flahault A., et al. Virus diversity in a winter epidemic of acute diarrhea in France. J Clin Microbiol 40 (2002) 4266-4272
6. Fujii R., Kuzuya M., Hamano M., Ogura H., Yamada M., and Mori T. Neutralization assay for human group C rotavirus using a reverse passive hemagglutination test for endpoint determination. J Clin Microbiol 38 (2000) 50-54
7. Guix S., Caballero S., Villena C., Bartolomé R., Latorre C., Rabella N., et al. Molecular epidemiology of astrovirus infection in Barcelona, Spain. J Clin Microbiol 40 (2002) 133-139
8. Jiang B., Gentsch J.R., Tsunemitsu H., Saif L.J., and Glass R.I. Sequence analysis of the gene encoding VP4 of a bovine group C rotavirus: molecular evidence for a new P Genotype. Virus Genes 19 (1999) 85-88
9. Jiang B., Tsunemitsu H., Dennehy P.H., Oishi I., Brown D., Schnagl R.D., et al. Sequence conservation and expression of the gene encoding the outer capsid glycoprotein among human group C rotavirus of global distribution. Arch Virol 141 (1996) 381-390
10. Kuzuya M., Hamano M., Nishijima M., Fujii R., Ogura H., Tanaka M., et al. An outbreak of acute gastroenteritis caused by human group C rotavirus in a welfare institution in Okayama prefecture. Jpn J Infect Dis 58 (2005) 255-257
11. Lambden P.R., Cooke S.J., Caul E.O., and Clarke I.N. Cloning of non cultivable human rotavirus by single primer amplification. J Virol 66 (1992) 1817-1822
12. Mwenda J.M., Peenze I., Omolo E., Galo M., and Steele A.D. Human group C rotavirus identfied in Kenya. East Afr Med J 80 (2003) 73-76
13. Nilsson M., Svenungsson B., Hedlund K.O., Uhnoo I., Lagergren A., Akre T., et al. Incidence and genetic diversity of group C rotavirus among adults. J Infect Dis 182 (2000) 678-684
14. Oishi I., Yamazaki K., and Minekawa Y. An occurence of diarrheal cases associated with group C rotavirus in adults. Microbiol Immunol 37 (1993) 505-509
15. Parashar U.D., Hummelman E.K., Bresee J.S., Miller M.A., and Glass R.I. Global illness and deaths caused by rotavirus disease in children. Emerg Infect Dis 9 (2003) 565-572
16. Peñaranda M.E., Cubitt W.D., Sinarachatanant P., Taylor D.N., Likanonsakul S., Saif L., et al. Group C rotavirus infections in patients with diarrhea in Thailand, Nepal, and England. J Infect Dis 160 (1989) 392-397
17. Phan T.G., Nguyen T.A., Yan H., Yagyu F., Kozlov V., Kozlov A., et al. Development of a novel protocol for RT-multiplex PCR to detect diarrheal viruses among infants and children with acute gastroenteritis in Eastern Russia. Clin Lab 51 (2005) 429-435
18. Qiao H., Nilsson M., Abreu E.R., Hedlund K.O., Johansen K., Zaori G., et al. Viral diarrhea in children in Beijing, China. J Med Virol 57 (1999) 390-396
19. Rahman M., Banik S., Faruque A.S.G., Taniguchi K., Sack D.A., Ranst M.V., et al. Detection and characterization of human group C rotavirus in Bangladesh. J Clin Micrbiol 43 (2005) 4460-4465
20. Saif L.J. Non group A rotavirus. In: Saif L.J., and Theil K.W. (Eds). Viral diarrhea of man and animals (1990), CRC Press, Boca Raton, FL 73-95
21. Sánchez-fauquier A., Roman E., Colomina J., Wilhelmi I., Glass R.I., and Jiang B. First detection of group C rotavirus in children with acute diarrhea in Spain. Arch Virol 148 (2003) 399-404
22. Schnagl R.D., Boniface K., Cardwell P., McCarthy D., Ondracek B., Coulson B., et al. Incidence of group C human rotavirus in central Australia and sequence variation of the VP7 and VP4 genes. J Clin Microbiol 42 (2004) 2127-2133
23. Tsunemitsu H., Jiang B., Yamashita Y., Oseto M., Ushijima H., and Saif L.J. Evidence of serologic diversity within group C rotavirus. J Clin Microbiol 30 (1992) 3009-3012
24. Yee EL, Jiang B, Kendall RS, Humphrey C, Glass RI. Group C rotavirus in a pediatric kidney transplant patient with diarrhea (case report). J Clin Virol 2006; 36: 306-308.