Common and distinct gene expression patterns induced by the herbicides 2,4-dichlorophenoxyacetic acid, cinidon-ethyl and tribenuron-methyl in wheat

Pest Management Science

Volumn 62, Issue 12, 2006, Pages 1155-1167

  Pasquer, Frédérique ^a   Ochsner, Urs ^a   Zarn, Jürg ^b   Keller, Beat ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

^b FEDERAL OFFICE OF PUBLIC HEALTH   (Switzerland)

Author keywords

cDNA microarray; Differential gene expression; Growth conditions; Herbicides; Triticum aestivum

Indexed keywords

2,4 DICHLOROPHENOXYACETIC ACID; ACRYLIC ACID DERIVATIVE; ARYLSULFONIC ACID DERIVATIVE; ETHYL 2 CHLORO 3 (2 CHLORO 5 (1,2 CYCLOHEX 1 ENEDICARBOXIMIDO)PHENYL)ACRYLATE; ETHYL 2-CHLORO-3-(2-CHLORO-5-(1,2-CYCLOHEX-1-ENEDICARBOXIMIDO)PHENYL)ACRYLATE; HERBICIDE; INDOLE DERIVATIVE; METSULFURON METHYL;

GENE EXPRESSION; GENETIC ANALYSIS; HERBICIDE; METABOLISM; PHOTOOXIDATION; PLANT DEFENSE; WHEAT;

ARTICLE; DRUG EFFECT; ENVIRONMENT; GENE EXPRESSION; GENE EXPRESSION PROFILING; METABOLISM; PLANT LEAF; WHEAT;

2,4-DICHLOROPHENOXYACETIC ACID; ACRYLATES; ARYLSULFONATES; ENVIRONMENT; GENE EXPRESSION; GENE EXPRESSION PROFILING; HERBICIDES; INDOLES; PLANT LEAVES; TRITICUM;

TRITICUM AESTIVUM;

EID: 33845286150     PISSN: 1526498X     EISSN: 15264998     Source Type: Journal    
DOI: 10.1002/ps.1291     Document Type: Article

References (57)

1. Wakabayashi K and Böger P, General physiological characteristics and mode of action of peroxidizing herbicides, in Peroxidizing Herbicides, ed. by Böger P and Wakabayashi K. Springer-Verlag, Berlin-Heidelberg, pp. 163-189 (1999).
2. Forthoffer N, Helvig C, Dillon N, Benveniste I, Zimmerlin A, Tardif F, et al, Induction and inactivation of a cytochrome P450 confering herbicide resistance in wheat seedlings. Eur J Drug Metab Pharmacokinet 26:9-16 (2001).
3. Coleman JOD, Blake-Kalff MMA and Davies TGE, Detoxification of xenobiotics by plants: chemical modification and vacuolar compartmentation. Trends Plant Sci 2:144-151 (1997).
4. Skidmore MW, Bound residues arising from the use of agrochemicals on plants, in Metabolism of Agrochemicals in Plants, ed. by Roberts T. John Wiley & Sons, Ltd, Chichester, UK, pp. 155-178 (2000).
5. Devine MD, Duke SO and Fedtke C, Herbicides with auxin activity, in Physiology of Herbicide Action, ed. by Huber LA and Bernhaut K. PTR Prentice-Hall, Inc., Englewood Cliffs, NJ, pp. 295-309 (1993).
6. Sterling TM and Hall JC, Mechanism of action of natural auxins and the auxinic herbicides, in Herbicide Activity: Toxicology, Biochemistry and Molecular Biology, ed. by Roe RM, Burton JD and Kuhr RJ. IOS Press, Amsterdam, pp. 111-141 (1997).
7. Dexter AG, Slife FW and Butler HS, Detoxification of 2,4-D by several plant species. Weed Sci 19:721-726 (1971).
8. Coupland D, Resistance to auxin analog herbicide, in Herbicide Resistance in Plants: Biology and Biochemistry, ed. by Powles S and Holtum J. CRC Press, Inc., Boca Raton, FL, pp. 171-214 (1994).
9. Bristol DW, Ghanuni AM and Oleson AE, Metabolism of 2,4- dichlorophenoxyacetic acid by wheat cell suspension cultures. J Agric Food Chem 25:1308-1314 (1977).
10. Scheel D and Sandermann H, Metabolism of 2,4-dichlorophenoxyacetic acid in cell-suspension cultures of soybean (Glycine max L.) and wheat (Triticum aestivum L.). 2. Evidence for incorporation into lignin. Planta 152:253-258 (1981).
11. Grossmann K and Schiffer H, Protoporphyrinogen oxidase-inhibiting activity of the new, wheat-selective isoindoldione herbicide, cinidon-ethyl. Pestic Sci 55:687-695 (1999).
12. Lee HJ, Duke MV and Duke SO, Cellular localization of protoporphyrinogen-oxidizing activities of etiolated barley (Hordeum vulgare L.) leaves (relationship to mechanism of action of protoporphyrinogen oxidase-inhibiting herbicides). Plant Physiol 102:881-889 (1993).
13. Asami T and Yoshida S, Strategy for peroxidizing herbicide-resistant crops, in Peroxidizing Herbicides, ed. by Böger P and Wakabayashi K. Springer-Verlag, Berlin-Heidelberg, pp. 329-345 (1999).
14. Jacobs JM, Jacobs NJ and Duke SO, Protoporphyrinogen destruction by plant extracts and correlation with tolerance to protoporphyrinogen oxidase-inhibiting herbicides. Pestic Biochem Physiol 55:77-83 (1996).
15. Knorzer OC and Böger P, Antagonizing peroxidizing herbicides, in Peroxidizing Herbicides, ed. by Böger P and Wakabayashi K. Springer-Verlag, Berlin-Heidelberg, pp. 303-327 (1999).
16. Devine MD, Duke SO and Fedtke C, Inhibition of amino acid metabolism, in Physiology of Herbicide Action, ed. by Huber LA and Bernhaut K. PTR Prentice-Hall, Inc., Englewood Cliffs, NJ, pp. 251-294 (1993).
17. Saari LL, Cotterman JC and Thill DC, Resistance to acetolactate synthase inhibiting herbicides, in Herbicide Resistance in Plants: Biology and Biochemistry, ed. by Powles S and Holtum JAM. CRC Press, Inc., Boca Raton, FL, pp. 83-139 (1994).
18. Brown HM, Mode of action, crop selectivity, and soil relations of the sulfonylurea herbicides. Pestic Sci 29:263-281 (1990).
19. Sweetser PB, Schow GS and Hutchison JM, Metabolism of chlorsulfuron by plants - biological basis for selectivity of a new herbicide for cereals. Pestic Biochem Physiol 17:18-23 (1982).
20. Hall LM, Holtum JAM and Powles SB, Mechanisms responsible for cross resistance and multiple resistance, in Herbicide Resistance in Plants: Biology and Biochemistry, ed. by Powles S and Holtum J. CRC Press, Inc., Boca Raton, FL, pp. 243-261 (1994).
21. Anderson JJ, Priester TM and Shalaby LM, Metabolism of metsulfuron-methyl in wheat and barley. J Agric Food Chem 37:1429-1434 (1989).
22. Roberts T, Tribenuron-methyl, in Metabolic Pathways of Agrochemicals. Part 1: Herbicides and Plant Growth Regulators, ed. by Roberts T. The Royal Society of Chemistry, Cambridge, UK, pp. 570-574 (1998).
23. Owen WJ, Herbicide metabolism as a basis for selectivity, in Metabolism of Agrochemicals in Plants, ed. by Roberts T. John Wiley & Sons, Ltd, Chichester, UK, pp. 211-258 (2000).
24. Roberts T, Preface, in Metabolic Pathways of Agrochemicals. Part 1: Herbicides and Plant Growth Regulators, ed. by Roberts T. The Royal Society of Chemistry, Cambridge, UK, pp. V-VI (1998).
25. Grossmann K, Mode of action of auxin herbicides: a new ending to a long, drawn out story. Trends Plant Sci 5:506-508 (2000).
26. Aizawa H and Brown HM, Metabolism and degradation of porphyrin biosynthesis inhibitor herbicides, in Peroxidizing Herbicides, ed. by Böger P and Wakabayashi K. Springer-Verlag, Berlin-Heidelberg, pp. 347-381 (1999).
27. Tottman DR, The decimal code for the growth-stages of cereals, with illustrations. Ann Appl Biol 110:441-454 (1987).
28. Pasquer F, Isidore E, Zarn J and Keller B, Specific patterns of changes in wheat gene expression after treatment with three antifungal compounds. Plant Mol Biol 57:693-707 (2005).
29. Ramakrishna W, Dubcovsky J, Park Y-J, Busso C, Emberton J, SanMiguel P, et al, Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes. Genetics 162:1389-1400 (2002).
30. m. Funct Integr Genomics 2:70-80 (2002).
31. Adjaye J, Herwig R, Herrmann D, Wruck W, Benkahla A, Brink TC, et al, Cross-species hybridisation of human and bovine orthologous genes on high density cDNA microarrays. BMC Genomics 5:83 (2004).
32. Close TJ, Wanamaker SI, Caldo RA, Turner SM, Ashlock DA, Dickerson JA, et al, A new resource for cereal genomics: 22k barley GeneChip comes of age. Plant Physiol 134:960-968 (2004).
33. Reymond P, Weber H, Damond M and Farmer EE, Differential gene expression in response to mechanical wounding and insect feeding in Arabidopsis. Plant Cell 12:707-720 (2000).
34. Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J, et al, Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res 30:e15 (2002).
35. Tusher VG, Tibshirani R and Chu G, Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 98:5116-5121 (2001).
36. Samimi G, Manorek G, Castel R, Breaux JK, Cheng TC, Berry CC, et al, cDNA microarray-based identification of genes and pathways associated with oxaliplatin resistance. Cancer Chemother Pharmacol 55:1-11 (2005).
37. Reymond P, Bodenhausen N, Van Poecke RM, Krishnamurthy V, Dicke M and Farmer EE, A conserved transcript pattern in response to a specialist and a generalist herbivore. Plant Cell 16:3132-3147 (2004).
38. Sturn A, Quackenbush J and Trajanoski Z, Genesis: cluster analysis of microarray data. Bioinformatics 18:207-208 (2002).
39. Feuillet C, Schachermayr G and Keller B, Molecular cloning of a new receptor-like kinase gene encoded at the LR10 disease resistance locus of wheat. Plant J 11:45-52 (1997).
40. Sambrook J, Fritsch EF and Maniatis T, Molecular Cloning: a Laboratory Manual. Cold Spring Harbor Laboratory, New York (1989).
41. Jacobs JM and Jacobs NJ, Porphyrin accumulation and export by isolated barley (Hordeum vulgare) plastids (effect of diphenyl ether herbicides). Plant Physiol 101:1181-1187 (1993).
42. Retzlaff K and Böger P, An endoplasmic reticulum plant enzyme has protoporphyrinogen IX oxidase activity. Pestic Biochem Physiol 54:105-114 (1996).
43. Grossmann K, Kwiatkowski J and Casper G, Regulation of phytohormone levels, leaf senescence and transpiration by the strobilurin kresoxim-methyl in wheat (Triticum aestivum). J Plant Physiol 154:805-808 (1999).
44. Grossmann K and Scheltrup F, Studies on the mechanism of selectivity of the auxin herbicide quinmerac. Pestic Sci 52:111-118 (1998).
45. Grossmann K and Kwiatkowski J, The mechanism of quinclorac selectivity in grasses. Pestic Biochem Physiol 66:83-91 (2000).
46. Grossmann K, The mode of action of quinclorac: a case study of a new auxin-type herbicide, in Herbicides and their Mechanisms of Action, ed. by Cobb AH and Kirkwood RC. Sheffield Academic Press, Sheffield, UK, pp. 181-214 (2000).
47. Batard Y, Schalk M, Pierrel MA, Zimmerlin A, Durst F and Werck-Reichhart D, Regulation of the cinnamate 4-hydroxylase (CYP73A1) in Jerusalem artichoke tubers in response to wounding and chemical treatments. Plant Physiol 113:951-959 (1997).
48. Baerg RJ, Barrett M and Polge ND, Insecticide and insecticide metabolite interactions with cytochrome P450 mediated activities in maize. Pestic Biochem Physiol 55:10-20 (1996).
49. Schuler MA and Werck-Reichhart D, Functional genomics of P450s. Annu Rev Plant Biol 54:629-667 (2003).
50. Katagi T and Mikami N, Primary metabolism of agrochemicals in plants, in Metabolism of Agrochemicals in Plants, ed. by Roberts T and Miyamoto J. John Wiley & Sons, Ltd, Chichester, UK, pp. 43-106 (2000).
51. Persans MW, Wang J and Schuler MA, Characterization of maize cytochrome P450 monooxygenases induced in response to safeners and bacterial pathogens. Plant Physiol 125:1126-1138 (2001).
52. Wang KL-C, Li H and Ecker JR, Ethylene biosynthesis and signaling networks. Plant Cell 14:S131-151 (2002).
53. Davies J and Caseley JC, Herbicide safeners: a review. Pestic Sci 55:1043-1058 (1999).
54. Yoshioka K, Nakashita H, Klessig DF and Yamaguchi I, Probenazole induces systemic acquired resistance in Arabidopsis with a novel type of action. Plant J 25:149-157 (2001).
55. DeVeylder L, VanMontagu M and Inze D, Herbicide safener-inducible gene expression in Arabidopsis thaliana. Plant Cell Physiol 38:568-577 (1997).
56. Rizhsky L, Liang H and Mittler R, The combined effect of drought stress and heat shock on gene expression in tobacco. Plant Physiol 130:1143-1151 (2002).
57. Voelckel C and Baldwin IT, Herbivore-induced plant vaccination. Part II. Array-studies reveal the transience of herbivore-specific transcriptional imprints and a distinct imprint from stress combinations. Plant J 38:650-663 (2004).