Population genetic structure of jumbo squid (Dosidicus gigas) evaluated by RAPD analysis

Fisheries Research

Volumn 83, Issue 1, 2007, Pages 113-118

  Sandoval Castellanos, Edson ^a   Uribe Alcocer, Manuel ^a   Díaz Jaimes, Píndaro ^a  

^a UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO   (Mexico)

Author keywords

Dosidicus gigas; Genetic structure; Jumbo squid; RAPDs

Indexed keywords

CEPHALOPOD; FISHERY SURVEY; GENETIC STRUCTURE; GENETIC VARIATION; NUCLEIC ACID ANALYSIS; TEMPORAL VARIATION;

CHILE; MEXICO [NORTH AMERICA]; NORTH AMERICA; PACIFIC OCEAN; PERU; SOUTH AMERICA;

CEPHALOPODA; DOSIDICUS GIGAS; OMMASTREPHIDAE;

EID: 33751537723     PISSN: 01657836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fishres.2006.09.007     Document Type: Article

References (36)

1. Adcock G.J., Shaw P.W., Rodhouse P.G., and Carvalho G.R. Microsatellite analysis of genetic diversity in the squid Illex argentinus during a period of intensive fishing. Mar. Ecol. Prog. Ser. 187 (1999) 171-178
2. Anderson C.I.H., and Rodhouse P.G. Life cycles, oceanography and variability: ommastrephid squid in variable environments. Fish. Res. 54 (2001) 133-143
3. Argüelles J., Rodhouse P.G., Villegas P., and Castillo G. Age growth and population structure of the jumbo flying squid Dosidicus gigas in Peruvian waters. Fish. Res. 54 (2001) 51-61
4. Brierly A.S., Rodhouse P.G., Thorpe J.P., and Clarke M.R. Genetic evidence of population heterogeneity and cryptic speciation in the ommastrephid squid Martialia hyadesi from the Patagonian shelf and the Antarctic Polar frontal zone. Mar. Biol. 116 (1993) 593-602
5. Brito-Castillo L., Alcántara-Razo E., Morales-Azpeitia R., and Salinas-Zavala C.A. Temperaturas del Golfo de California durante mayo y junio de 1996 y su relación con las capturas de calamar gigante (Dosidicus gigas D'Orbigny, 1835). Cienc. Mar. 26 (2000) 413-440
6. Caddy, J.F., 1983. The cephalopods: factors relevant to their population dynamics and the assessment and management of stocks. In: Caddy, J.F. (Ed.), Advances in Assessment of World Cephalopod Resources. FAO Fish. Tech. Pap. 231, 416-452.
7. Carvalho G.R., and Hauser L. Molecular genetics and the stock concept in fisheries. Rev. Fish. Biol. Fish. 4 (1994) 326-350
8. Carvalho G.R., Thomson A., and Stoner A.L. Genetic diversity and population differentiation of the shortfin squid Illex argentinus in the south-west Atlantic. J. Exp. Mar. Biol. Ecol. 158 (1992) 105-121
9. Díaz-Jaimes P., and Uribe-Alcocer M. Allozime and RAPD variation in the eastern Pacific yellowfin tuna (Thunnus albacares). Fish. Bull. 101 (2003) 769-777
10. Dupanloup I., Schneider S., and Excoffier L. A simulated annealing approach to define the genetic structure of populations. Mol. Ecol. 11 (2002) 2571-2581
11. Ehrhardt N.M., Solís-Nava A., Jaquemin P.S., Ortiz-Cobos J., Ulloa-Ramírez P., González-Dávila G., and García-Badillo F. Análisis de la biología y condiciones del stock del calamar gigante (Dosidicus gigas) en el Golfo de California, México, durante 1980. Ciencia Pesquera 5 (1986) 63-76
12. Excoffier L., Smouse P.E., and Quattro J.M. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA data. Genetics 131 (1992) 479-491
13. FAO, 2006. FAO Yearbook of Fishery Statistics 98 (1).
14. Hartl D.L., and Clark A.G. Principles of Population Genetics (1989), Sinnauer Associates, Sunderland
15. Hernández-Herrera A., Morales-Bojórquez E., Neváres-Martínez M.O., Balmori-Ramírez A., and Rivera Parra G.I. Distribución de tallas y aspectos de la reproducción del calamar gigante (Dosidicus gigas) en el Golfo de California, México, en 1996. Ciencia Pesquera 12 (1996) 85-89
16. Lynch M., and Milligan B.G. Analysis of population genetic structure with RAPD markers. Mol. Ecol. 3 (1994) 91-99
17. Markaida U., Quiñónez-Velázquez C., and Sosa-Nishizaki O. Age, growth and maturation of the jumbo squid Dosidicus gigas (cephalopoda: ommastrephidae) from the Gula of California. Mexico Fish. Res. 66 (2004) 31-47
18. Markaida U., Rosenthal J.J.C., and Gilly W.F. Tagging studies on the jumbo squid (Dosidicus gigas) in the Gulf of California. Mexico Fish. Bull. 103 (2005) 219-226
19. Miller M.P. Tools for Population Genetic Analyses (TFPGA): A Windows Program for the Analysis of Allozyme and Molecular Population Genetic Data. Release 1.3 (1998), Northern Arizona University, Flagstaff, Arizona
20. Miller M.P. AMOVA-PREP: A Program for the Preparation of AMOVA Input Files from Dominant-marker Raw Data. Release 1.01 (1998), Northern Arizona University, Flagstaff, Arizona
21. Morales-Bojórquez E., Hernández-Herrera A., Nevárez-Martínez M.O., Díaz de León-Corral A.J., Rivera-Parra G.I., and Ramos-Montiel A. Abundancia poblacional del calamar gigante (Dosidicus gigas) en las costas de Sonora. México Oceanides 12 (1997) 89-95
22. Nei M. Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. U.S.A. 70 (1973) 3321-3323
23. Nigmautllin Ch.M., Nesis K.N., and Arphipkin A.I. A review of the biology of the jumbo squid Dosidicus gigas (cephalopoda: ommastrephidae). Fish. Res. 54 (2001) 9-19
24. Raymond M.L., and Rousset F. An exact test for population differentiation. Evolution 49 (1995) 1280-1283
25. Reynolds J., Weir B.S., and Cockerham C.C. Estimation of the coancestry coefficient: basis for short-term genetic distance. Genetics 105 (1983) 767-779
26. Rice W.R. Analyzing tables of statistical tests. Evolution 43 (1989) 223-225
27. Sands Ch.J., Jarman S.N., and Jackson G.D. Genetic differentiation in the squid Moroteuthis ingens inferred from RAPD analysis. Polar Biol. 26 (2003) 166-170
28. Shannon C.E., and Weaver W. The mathematical Theory of Communication (1949), University of Illinois Press, Urbana
29. Sokal R., and Rohlf F.J. Biometry (1995), W.H. Freeman and Co., New York
30. Tafur R., and Rabí M. Reproduction of the jumbo flying squid Dosidicus gigas (Orbigny, 1835) (cephalopoda: ommastrephidae) off Peruvian coasts. Mar. Sci. 61 2 (1997) 33-37
31. Taipe A., Yamashiro C., Mariátegui L., Rojas P., and Roque C. Distribution and concentrations of jumbo flying squid (Dosidicus gigas) off the Peruvian coast between 1991 and 1999. Fish. Res. 54 (2001) 21-32
32. Yamashiro C., Mariátegui L., and Taipe A. Cambios en la distribución y concentración del Calamar gigante (Dosidicus gigas) frente a la costa peruana durante 1991-1995. Inf. Prog. Inst. Mar Perú 52 (1997) 3-40
33. Yeh F.C., Yang R., and Boyle T. Population Genetic Analysis, POPGENE (32-bit): Microsoft Window-based Freeware for Population Genetic Analysis. Release 1.32 (1999), University of Alberta, Edmonton, AB
34. Waples R.S. Temporal variation in allele frequencies; testing the right hypothesis. Evolution 43 (1989) 1236-1251
35. Ward R.D. Genetics in fisheries management. Hydrobiologia 420 (2000) 191-201
36. Weir B.S., and Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 38 (1984) 1358-1370