Molecular and morphological relationships between two closely related species, Turbinaria ornata and T. conoides (Sargassaceae, Phaeophyceae)

Biochemical Systematics and Ecology

Volumn 35, Issue 2, 2007, Pages 91-98

  Rohfritsch, Audrey ^a,b   Payri, Claude ^a,c   Stiger, Valérie ^d   Bonhomme, François ^b  

^a UNIVERSITÉ DE LA POLYNÉSIE FRANÇAISE   (French Polynesia)

^b CNRS   (France)

^c INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (New Caledonia)

^d UNIVERSITÉ DE BRETAGNE OCCIDENTALE   (France)

Author keywords

Elongation factor; Intergenic mitochondrial region; ITS; Rubisco; Sister species; Turbinaria

Indexed keywords

BROWN ALGA; MORPHOLOGY; MORPHOTYPE; TAXONOMY;

ALGAE; PHAEOPHYCEAE; SARGASSACEAE; TURBINARIA (PHAEOPHYCEAE); TURBINARIA CONOIDES; TURBINARIA ORNATA;

EID: 33751504308     PISSN: 03051978     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bse.2006.09.002     Document Type: Article

References (36)

1. Chase M.W., and Hills H.H. Silica gel: an ideal material for field preservation of leaf samples for DNA studies. Taxon 40 (1991) 215-220
2. Coyer J.A., Robertson D.L., and Alberte R.S. Genetic variability within a population and between diploid/haploid tissue of Macrocystis pyrifera (Phaeophyceae). J. Phycol. 30 (1994) 545-552
3. Fama P., Jousson O., Zaninetti L., Meinesz A., Dini F., Di Guiseppe G., Millar A., and Pawlowski J. Genetic polymorphism in Caulerpa taxifolia (Ulvophyceae) chloroplast DNA revealed by a PCR-based assay of the invasive Mediterranean strain. J. Evol. Biol. 15 (2002) 618-624
4. Farris J.S., Kallersjo M., Kluge A.G., and Bult C. Testing significance of incongruence. Cladistics 10 (1994) 315-319
5. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
6. Frederico C., Gurgel D., and Fredericq S. Systematics of the Gracilariaceae (Gracilariales, Rhodophyta): a critical assessment based on rbcL sequences analyses. J. Phycol. 40 (2004) 138-159
7. Galtier N., Gouy M., and Gautier C. SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput. Appl. Biosci. 12 (1996) 543-548
8. Gielly L., Yuan Y.M., Kupfer P., and Taberlet P. Phylogenetic use of noncoding regions in the genus Gentiana L.: chloroplast trnL (UAA) intron versus nuclear ribosomal internal transcribed spacer sequences. Mol. Phylogenet. Evol. 5 (1996) 460-466
9. Hall, T., 1999. BioEdit [http://www.mbio.ncsu.edu/BioEdit/bioedit.html]
10. John D.M., and Maggs C.A. Species problems in eukaryotic algae: a modern perspective. In: Claridge M.F., Dawah H.A., and Wilson M.R. (Eds). The Units of Biodiversity: Species in Practice (1997), Chapman and Hall, London 83-107
11. Kamiya M., West J.A., King R.J., Zuccarello G.C., Tanaka J., and Hara Y. Evolutionary divergence in the red algae Caloglossa leprieurii and C. apomeiotica. J. Phycol. 34 (1998) 361-370
12. Kawai T. Morphology, life history, and molecular phylogeny of Stschapovia flagellaris (Tilopteridales, Phaeophyceae) and the erection of the Stschapoviaceae fam. nov. J. Phycol. 40 (2004) 1156-1169
13. Kawashima S. Taxonomic and distribution remarks on the laminariaceous algae (Laminariales, Phaeophyceae) of Japan: 28 Laminariaceae: Laminaria (7): Laminaria japonica. Aquabiology 72 (1991) 44-47
14. Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide-sequences. J. Mol. Evol. 16 (1980) 111-120
15. Kumar S., Tamura K., and Nei M. MEGA 3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5 (2004) 150-163
16. Lewis L.A., and Flechtner V.R. Cryptic species of Scenedesmus (Chlorophyta) from desert soil communities of Western North America. J. Phycol. 40 (2004) 1127-1137
17. Manhart J.R., and McCourt R.M. Molecular data and species concepts in the algae. J. Phycol. 28 (1992) 730-737
18. Nam K.W., Maggs C.A., McIvor L., and Stanhope M.J. Taxonomy and phylogeny of Osmundea (Rhodophyceae, Rhodophyta) in Atlantic Europe. J. Phycol. 36 (2000) 759-772
19. N'Yeurt A.D.R., and Payri C.E. A preliminary annotated checklist of the marine algae and seagrasses of the Wallis Islands (French Overseas Territory of Wallis and Futuna), South Pacific. Aust. Syst. Bot. 17 (2004) 367-397
20. Payri C. The effect of environment on the biology and morphology of Turbinaria ornata from the Tiahura reef (Moorea). Bot. Mar. 27 (1984) 327-333
21. Saitou N., and Nei M. The Neighbor-joining method - a new method for reconstructing phylogenetic trees. Mol. Bio. Evol. 4 (1987) 406-425
22. Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning: A Laboratory Manual (1989), Cold Spring Harbor Laboratory, New York
23. de Senerpont Domis L.N., Famà P., Bartlett A.J., Prud'homme van Reine W.F., Espinosa C.A., and Trono Jr. G.C. Defining taxon boundaries in members of the morphologically and genetically plastic genus Caulerpa (Caulerpales, Chlorophyta). J. Phycol. 39 (2003) 1019-1037
24. Shimada S., and Masuda M. Reassessment of the taxonomic status of Gelidium subfastigiatum (Gelidiales, Rhodophyta). Phycol. Res. 51 (2003) 271-278
25. Siemer B.L., Stam W.T., Olsen J.L., and Pedersen P.M. Phylogenetic relationships of the brown algal orders Ectocarpales, Chordariales, Dictyosiphonales, and Tilopteridales (Phaeophyceae) based on RUBISCO large subunit and spacer sequences. J. Phycol. 34 (1998) 1038-1048
26. Silva P.C., Basson P.W., and Moe R.L. Catalogue of the Benthic Marine Algae of the Indian Ocean. University of California Publications in Botany 79 (1996) 1-1259
27. Stiger V., Horiguchi T., Yoshida T., Coleman A.W., and Masuda M. Phylogenetic relationships of Sargassum (Sargassaceae, Phaeophyceae) with reference to a taxonomic revision of the section Phyllocystae based on ITS-2 nrDNA sequences. Phycol. Res. 48 (2000) 251-260
28. Stiger V., and Payri C. Spatial and seasonal variations in the biological characteristics of two invasive brown algae, Turbinaria ornata (Turner) J. Agardh and Sargassum mangarevense (Grunow) Setchell (Sargassaceae, Fucales) spreading on the reefs of Tahiti (French Polynesia). Bot. Mar. 42 (1999) 295-306
29. Swofford D.L. PAUP - a computer-program for phylogenetic inference using Maximum Parsimony. J. Gen. Physiol. 102 (1993) A9
30. Taylor W.M. The genus Turbinaria in eastern seas. J. Linn. Soc. Lond. Bot. 58 (1964) 475-487
31. Voisin M., Engel C.R., and Viard F. Differential shuffling of native genetic diversity across introduced regions in a brown alga: aquaculture vs. maritime traffic effects. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 5432-5437
32. Wattier R.A., and Maggs C.A. Intraspecific variation in seaweeds: the application of new tools and approaches. Adv. Bot. Res. 35 (2001) 171-212
33. Wynne M.J. Turbinaria foliosa sp. nov. (Fucales, Phaeophyceae) from the Sultanate of Oman, with a census of currently recognized species in the genus Turbinaria. Phycol. Res. 50 (2002) 283-293
34. Yoshida T., Stiger V., and Horiguchi T. Sargassum boreale sp. nov. (Fucales, Phaeophyceae) from Hokkaido, Japan. Phycol. Res. 48 (2000) 125-131
35. Yotsukura N., Denboh T., Motomura T., Horiguchi T., Coleman A.W., and Ichimura T. Little divergence in ribosomal DNA internal transcribed spacer -1 and -2 sequences among non-digitate species of Laminaria (Phaeophyceae) from Hokkaido, Japan. Phycol. Res. 47 (1999) 71-80
36. Zuccarello G.C., and West J.A. Multiple cryptic species: molecular diversity and reproductive isolation in the Bostrychia radicans/B. moritziana complex (Rhodomelaceae, Rhodophyta) with focus on North American isolates. J. Phycol. 39 (2003) 948-959