Secondary structure and 3D homology modeling of grass carp (Ctenopharyngodon idellus) major histocompatibility complex class I molecules

Protein Expression and Purification

Volumn 51, Issue 1, 2007, Pages 120-125

  Fang Hao, Hui ^a   Li, Xin Sheng ^a   Gao, Feng Shan ^a   Xue Wu, Wen ^a   Xia, Chun ^a  

^a CHINA AGRICULTURAL UNIVERSITY   (China)

Author keywords

2 microglobulin; Circular dichroism spectrum; Grass carp; Homology modeling; MHC I; Secondary structure

Indexed keywords

BETA 2 MICROGLOBULIN; HLA ANTIGEN CLASS 1; HYBRID PROTEIN;

ANIMAL; ARTICLE; BIOSYNTHESIS; CARP; CHEMICAL STRUCTURE; CHEMISTRY; CIRCULAR DICHROISM; GENE VECTOR; IMMUNOLOGY; ISOLATION AND PURIFICATION; PROTEIN SECONDARY STRUCTURE;

ANIMALS; BETA 2-MICROGLOBULIN; CARPS; CIRCULAR DICHROISM; GENETIC VECTORS; HISTOCOMPATIBILITY ANTIGENS CLASS I; MODELS, MOLECULAR; PROTEIN STRUCTURE, SECONDARY; RECOMBINANT FUSION PROTEINS;

CTENOPHARYNGODON IDELLA; CYPRINUS CARPIO;

EID: 33751437675     PISSN: 10465928     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pep.2006.08.003     Document Type: Article

References (18)

1. Saper M.A., Bjorkman P.J., and Wiley D.C. Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 A resolution. J. Mol. Biol. 219 (1991) 277-319
2. Collins R.W. Human MHC class I chain related (MIC) genes: their biological function and relevance to disease and transplantation. Eur. J. Immunogenet. 31 (2004) 105-114
3. Degano M., Garcia K.C., Apostolopoulos V., Rudolph M.G., Teyton L., and Wilson I.A. A functional hot spot for antigen recognition in a superagonist TCR/MHC complex. Immunity 12 (2000) 251-261
4. Sliz P., Michielin O., Cerottini J.C., Luescher I., Romero P., Karplus M., and Wiley D.C. Crystal structures of two closely related but antigenically distinct HLA-A2/melanocyte-melanoma tumor-antigen peptide complexes. J. Immunol. 167 (2001) 3276-3284
5. Garboczi D.N., Ghosh P., Utz U., Fan Q.R., Biddison W.E., and Wiley D.C. Structure of the complex between human T-cell receptor, viral peptide and HLA-A2. Nature 384 (1996) 134-141
6. Bjorkman P.J., Saper M.A., Samraoui B., Bennett W.S., Strominger J.L., and Wiley D.C. Structure of the human class I histocompatibility antigen, HLA-A2. Nature 329 (1987) 506-512
7. Madden D.R. The three-dimensional structure of peptide-MHC complexes. Annu. Rev. Immunol. 13 (1995) 587-622
8. Gao G.F., Tormo J., Gerth U.C., Wyer J.R., McMichael A.J., Stuart D.I., Bell J.I., Jones E.Y., and Jakobsen B.K. Crystal structure of the complex between human CD8alpha(alpha) and HLA-A2. Nature 387 (1997) 630-634
9. Sylvester-Hvid C., Nielsen L.L., Hansen N.J., Pedersen L.O., and Buus S. A single-chain fusion molecule consisting of peptide, major histocompatibility gene complex class I heavy chain and beta2-microglobulin can fold partially correctly, but binds peptide inefficiently. Scand. J. Immunol. 50 (1999) 355-362
10. Yan R.Q., Li X.S., Yang T.Y., and Xia C. Structures and homology modeling of chicken major histocompatibility complex protein class I (BF2 and beta2m). Mol. Immunol. 43 (2006) 1040-1046
11. Xia C., Xu G.X., Lin C.Y., Hu T.J., Yan R.Q., and Gao F. Molecular cloning and polymorphism of major histocompatibility complex class I genes from Grass carp (Ctenophayngodon idellus). Prog. Nat. Sci. 14 (2004) 403-410
12. Hao H.F., Yang T.Y., Yan R.Q., Gao F.S., and Xia C. cDNA cloning and genomic structure of grass carp (Ctenophayngodon idellus) beta2-microglobulin gene. Fish Shellfish Immun. 20 (2006) 118-123
13. H.H.F. Yang, T.Y. Jia, Z. H. Chen, W.H. Chun Xia, Characterization of grass carp (Ctenopharyngodon idellus) MHC class I domain lineages, Fish Shellfish Immun., 2006. Available online: 22 March 2006.
14. Xia C., Dan W., Wen-Xue W., Jian-Qing W., Li W., Tian-Yao Y., Qin W., and Yi-Bao N. Cloning and expression of interferon-alpha/gamma from a domestic porcine breed and its effect on classical swine fever virus. Vet. Immunol. Immunopathol. 104 (2005) 81-89
15. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
16. Chen Y.H., Yang J.T., and Martinez H.M. Determination of the secondary structures of proteins by circular dichroism and optical rotatory dispersion. Biochemistry 11 (1972) 4120-4131
17. C. Combet, C. Blanchet, C. Geourjon, G. Deleage, NPS@: Network Protein Sequence Analysis TIBS 25 (2000) 147-150.
18. Sapaer M.A., Bjorkman P.J., and Wiley D.C. Refined structure of the human histocompatibility antigen HLA-A2 at 2.6 A resolution. J. Mol. Biol. 219 (1991) 277-319