Detection and identification of IHN and ISA viruses by isothermal DNA amplification in microcapillary tubes

Analytical and Bioanalytical Chemistry

Volumn 386, Issue 7-8, 2006, Pages 1975-1984

  McCarthy, Erik L ^a   Egeler, Teressa J ^a   Bickerstaff, Lee E ^a   Pereira Da Cunha, Mauricio ^a   Millard, Paul J ^a  

^a University of Maine   (United States)

Author keywords

Bioanalytical methods; Biosensors; Fluorescence luminescence; Molecular padlock; Virus

Indexed keywords

BIOSENSORS; CAPILLARY TUBES; DNA; FLUORESCENCE;

BIOANALYTICAL METHODS; MICROCAPILLARY TUBES; MOLECULAR PADLOCK; ROLLING CIRCLE AMPLIFICATION (RCA);

VIRUSES;

VIRUS DNA;

ARTICLE; GENETIC PROCEDURES; GENETICS; INSTRUMENTATION; METHODOLOGY; NUCLEIC ACID AMPLIFICATION; ORTHOMYXOVIRUS; SPECTROFLUOROMETRY; TEMPERATURE; VIRAL HEMORRHAGIC SEPTICEMIA VIRUS;

BIOSENSING TECHNIQUES; DNA, VIRAL; ISAVIRUS; NOVIRHABDOVIRUS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; SPECTROMETRY, FLUORESCENCE; TEMPERATURE;

BACTERIA (MICROORGANISMS); INFECTIOUS HEMATOPOIETIC NECROSIS VIRUS; INFECTIOUS SALMON ANEMIA VIRUS; PROTOZOA;

EID: 33751186092     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-006-0872-9     Document Type: Article

References (36)

1. Oroskar AA, Rasmussen SE, Rasmussen HN, Rasmussen SR, Sullivan BM, Johansson A (1996) Clin Chem 42:1547-1555
2. Rasmussen SR, Rasmussen HB, Larsen MR, Hoff-Jorgensen R, Cano RJ (1994) Clin Chem 40:200-205
3. Andreadis JD, Chrisey LA (2000) Nucleic Acids Res 28:e5
4. Khudyakov Yu E, Gaur L, Singh J, Patel P, Fields HA (1994) Nucleic Acids Res 22:1320-1321
5. Carmon A, Vision TJ, Mitchell SE, Thannhauser TW, Muller U, Kresovich S (2002) Biotechniques 32:410, 412, 414-8, 420
6. Li HH, Gyllensten UB, Cui XF, Saiki RK, Erlich HA, Arnheim N (1988) Nature 335:414-417
7. Liao CS, Lee GB, Wu JJ, Chang CC, Hsieh TM, Huang FC, Luo CH (2005) Biosens Bioelectron 20:1341-1348
8. Hindson BJ, Makarewicz AJ, Setlur US, Henderer BD, McBride MT, Dzenitis JM (2005) Biosens Bioelectron 20:1925-1931
9. Vernon SD, Farkas DH, Unger ER, Chan V, Miller DL, Chen YP, Blackburn GF, Reeves WC (2003) BMC Infect Dis 3:12
10. Ivnitski D, O'Neil DJ, Gattuso A, Schlicht R, Calidonna M, Fisher R (2003) Biotechniques 35:862-869
11. Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, Hase T (2000) Nucleic Acids Res 28:e63
12. Hataoka Y, Zhang L, Mori Y, Tomita N, Notomi T, Baba Y (2004) Anal Chem 76:3689-3693
13. Gunimaladevi I, Kono T, LaPatra S, Sakai M (2005) Arch Virol 150:899-909
14. Caipang CMA, Haraguchi I, Ohira T, Hirono I, Aoki T (2004) J Virol Meth 121:155-161
15. Fire A, Xu SQ (1995) Proc Natl Acad Sci USA 92:4641-4645
16. Liu D, Daubendiek S, Zillman M, Ryan K, Kool E (1996) J Am Chem Soc 118:1587-1594
17. Lizardi P, Huang X-H, Zhu Z, Bray-Ward P, Thomas D, Ward D (1998) Nature Genetics 19:225-232
18. Demidov VV (2002) Expert Rev Mol Diagn 2:442-548
19. Millard PJ, Bickerstaff LE, LaPatra SE, Kim CH (2006) J Fish Dis 29:201-213
20. Nilsson M, Malmgren H, Samiotaki M, Kwiatkowski M, Chowdhary B, Landegren U (1994) Science 265:2085-2088
21. Hatch A, Sano T, Misasi J, Smith CL (1999) Genet Anal 15:35-40
22. Zhang DY, Liu B (2003) Expert Rev Mol Diagn 3:237-248
23. McCarthy EL, Bickerstaff LE, Pereira da Cunha M, Millard PJ (2006) Biosens Bioelectron (in press)
24. McCarthy EL, Egeler T, Bickerstaff L, Pereira da Cunha M, Millard PJ (2005) Proc SPIE 5994(0X):1-7
25. Morzunov S, Winton J, Nichol S (1995) Virus Res 38:175-192
26. Clouthier S, Rector T, Brown N, Anderson E (2002) J Gen Virol 83:421-428
27. Kanan SM, Tze WTY, Tripp CP (2002) Langmuir 18:6623-6627
28. Munir K, Kibenge FS (2004) J Virol Methods 117:37-47
29. Binder H, Kirsten T, Loeffler M, Stadler PF (2004) J Phys Chem 108:18003-18014
30. Nerette P, Dohoo I, Hammell L (2005) J Fish Dis 28:89-99
31. Nerette P, Dohoo I, Hammell L, Gagne N, Barbash P, MacLean S, Yason C (2005) J Fish Dis 28:101-110
32. Nkodo AE, Gamier JM, Tinland B, Ren H, Desruisseaux C, McCormick LC, Drouin G, Slater GW (2001) Electrophoresis 22:2424-2432
33. Robertson RM, Laib S, Smith DE (2006) Proc Natl Acad Sci USA 103:7310-7314
34. Doktycz MJ, Beattie KL (1997) In: Beugelsdijk TJ (ed) Automation technologies for genome characterization. Wiley & Sons, New York, pp 205-225
35. Beattie WG, Meng L, Turner SL, Varma RS, Dao DD, Beattie KL (1995) Mol Biotechnol 4:213-225
36. Peterson AW, Heaton RJ, Georgiadis RM (2001) Nucleic Acids Res 29:5163-5168