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Volumn 7, Issue , 2006, Pages

inGeno - An integrated genome and ortholog viewer for improved genome to comparisons

Author keywords

[No Author keywords available]

Indexed keywords

GENOME COMPARISON; INTERACTIVE VISUALIZATIONS; METABOLIC PATHWAYS; MODULAR SOFTWARES; PROKARYOTIC GENOMES; PROTEIN COMPARISON; SEQUENCE ANALYSIS; SEQUENCE COMPARISONS;

EID: 33750951016     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-461     Document Type: Article
Times cited : (6)

References (26)
  • 1
    • 0034980876 scopus 로고    scopus 로고
    • Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbes
    • Hacker J, Carniel E: Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbes. EMBO Rep 2000, 2(5):376-81.
    • (2000) EMBO Rep , vol.2 , Issue.5 , pp. 376-381
    • Hacker, J.1    Carniel, E.2
  • 2
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman S, Wunsch C: A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 1970, 48:443-453.
    • (1970) J Mol Biol , vol.48 , pp. 443-453
    • Needleman, S.1    Wunsch, C.2
  • 3
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith T, Waterman M: Identification of common molecular subsequences. J Mol Biol 1981, 147:195-197.
    • (1981) J Mol Biol , vol.147 , pp. 195-197
    • Smith, T.1    Waterman, M.2
  • 5
    • 0033832676 scopus 로고    scopus 로고
    • Conservation, Regulation, Synteny, and Introns in a Large-scale C. briggsae-C. elegans Genomic Alignment
    • Kent WJ, Zahler AM: Conservation, Regulation, Synteny, and Introns in a Large-scale C. briggsae-C. elegans Genomic Alignment. Genome Res 2000, 10(8):1115-25.
    • (2000) Genome Res , vol.10 , Issue.8 , pp. 1115-1125
    • Kent, W.J.1    Zahler, A.M.2
  • 6
    • 0037270315 scopus 로고    scopus 로고
    • AVID: A Global Alignment Program
    • Bray N, Dubchak I, Pachter L: AVID: A Global Alignment Program. Genome Res 2003, 13(1):97-102.
    • (2003) Genome Res , vol.13 , Issue.1 , pp. 97-102
    • Bray, N.1    Dubchak, I.2    Pachter, L.3
  • 7
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: Multiple Alignment of Conserved Genomic Sequence with Rearrangements
    • Darling ACE, Mau B, Frederick RB, Perna NT: Mauve: Multiple Alignment of Conserved Genomic Sequence with Rearrangements. Genome Research 2004, 14(7):1394-1403.
    • (2004) Genome Research , vol.14 , Issue.7 , pp. 1394-1403
    • Darling, A.C.E.1    Mau, B.2    Frederick, R.B.3    Perna, N.T.4
  • 10
    • 0037398368 scopus 로고    scopus 로고
    • Efficient tools for large-scale multiple alignment of genomic DNA
    • ISC Comparative Sequencing Program, reen ED, Sidow A, Batzoglou S: LAGAN and multi-LAGAN
    • Brudno M, Do CB, Cooper GM, Kim MF, Davydov E, ISC Comparative Sequencing Program, reen ED, Sidow A, Batzoglou S: LAGAN and multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA. Genome Res 2003, 13:721-31.
    • (2003) Genome Res , vol.13 , pp. 721-731
    • Brudno, M.1    Do, C.B.2    Cooper, G.M.3    Kim, M.F.4    Davydov, E.5
  • 12
    • 0042490659 scopus 로고    scopus 로고
    • MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences
    • NISC Comparative Sequencing Program, Green ED, Hardison RC, Miller W
    • Schwartz S, Elnitski L, Li M, Weirauch M, Riemer C, Smit A, NISC Comparative Sequencing Program, Green ED, Hardison RC, Miller W: MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences. Nucleic Acids Res 2003, 31:3518-3524.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3518-3524
    • Schwartz, S.1    Elnitski, L.2    Li, M.3    Weirauch, M.4    Riemer, C.5    Smit, A.6
  • 13
    • 1842845736 scopus 로고    scopus 로고
    • The Bio toolkits - A brief overview
    • Mangalam H: The Bio toolkits - a brief overview. Brief Bioinformatics 2002, 3(3):296-302.
    • (2002) Brief Bioinformatics , vol.3 , Issue.3 , pp. 296-302
    • Mangalam, H.1
  • 14
    • 84874648814 scopus 로고    scopus 로고
    • HSQLDB
    • HSQLDB [http://www.hsqldb.org]
  • 16
    • 0038634988 scopus 로고    scopus 로고
    • MuGeN: Simultaneous exploration of multiple genomes and analysis results
    • Hoebeke M, Nicolas P, Bessières P: MuGeN: simultaneous exploration of multiple genomes and analysis results. Bioinformatics 2003, 19(7):859-864.
    • (2003) Bioinformatics , vol.19 , Issue.7 , pp. 859-864
    • Hoebeke, M.1    Nicolas, P.2    Bessières, P.3
  • 19
    • 0037376106 scopus 로고    scopus 로고
    • Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua: Clues for evolution and pathogenicity
    • Listeria Consortium
    • Buchrieser C, Rusniok C, Kunst F, Cossart P, Glaser P, Listeria Consortium: Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua: clues for evolution and pathogenicity. FEMS Immunology and Medical Microbiology 2003, 35:207-13.
    • (2003) FEMS Immunology and Medical Microbiology , vol.35 , pp. 207-213
    • Buchrieser, C.1    Rusniok, C.2    Kunst, F.3    Cossart, P.4    Glaser, P.5
  • 20
    • 7944222097 scopus 로고    scopus 로고
    • Molecular determinants of Listeria monocytogenes virulence
    • Dussurget O, Pizarro-Cerda J, Cossart P: Molecular determinants of Listeria monocytogenes virulence. Annu Rev Microbiol 2004, 58:587-610.
    • (2004) Annu Rev Microbiol , vol.58 , pp. 587-610
    • Dussurget, O.1    Pizarro-Cerda, J.2    Cossart, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.