Genetic characterizations of Mactra veneriformis (Bivalve) along the Chinese coast using ISSR-PCR markers

Aquaculture

Volumn 261, Issue 3, 2006, Pages 865-871

  Hou, Lin ^a   Lü, Hongli ^a   Zou, Xiangyang ^b   Bi, Xiangdong ^a   Yan, Deqin ^a   He, Chongbo ^a  

^a LIAONING NORMAL UNIVERSITY   (China)

^b DALIAN MEDICAL UNIVERSITY   (China)

Author keywords

Differentiation; Gene flow; Genetic structure; ISSR PCR; Mactra veneriformis

Indexed keywords

BIOMARKER; BIVALVE; COASTAL ZONE; GENE FLOW; GENETIC STRUCTURE; GEOGRAPHICAL VARIATION; ISOLATION EFFECT; POLYMERASE CHAIN REACTION; POLYMORPHISM; POPULATION SIZE;

ASIA; CHINA; EURASIA; FAR EAST;

BIVALVIA; MACTRA; MACTRA VENERIFORMIS; PSEUDOCARDIUM SACHALINENSIS;

EID: 33750584409     PISSN: 00448486     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquaculture.2006.09.011     Document Type: Article

References (31)

1. Abbot P. Individual and population variation in invertebrates revealed by Inter-simple Sequence Repeats (ISSRs). Journal of Insect Science 18 (2001) 1-3
2. Black B. RAPDFST - A FORTRAN Program to Estimate F(ST) and Effective Migration Rates Among Subpopulations Using RAPD-PCR Files (1997), Colorado State University, Fort Collins, CO wcb4@lamar.colostate.edu
3. Esselman E.J., Li J.Q., Crawford D.J., Windus J.L., and Wolfe A.D. Clonal diversity in the rare Calamagrostis porteri spp. Insperata (Poaceae): comparative results for allozymes and random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) markers. Molecular Ecology 8 (1999) 443-451
4. Felsenstein J. PHYLIP (Phylogeny Inference Package) Version 3.5c (1993). joe@genetics.washington.edu
5. Hou L., Qu R.Z., and Zou X.Y. The analysis of four bisexual Artemia strains by ISSR DNA fingerprints. Journal of Liaoning Normal University (Natural Science Edition) 2 (2003) 174-177 (in Chinese)
6. Johson M.S., and Joll L.M. Genetic subdivision of the pearl oyster Pinctada maxima (Jameson, 1901) (Mollusca: Pteriidae) in northern Australia. Australian Journal of Marine and Freshwater Research 44 (1993) 519-526
7. Kimura M., and Crow J.F. The number of alleles that can be maintained in a finite population. Genetics 49 (1964) 725-738
8. Laudien J., Brey T., and Estuarine A.W.E. Population structure, growth and production of the surf clam Donax serra (Bivalvia, Donacidae) on two Namibian Sandy beaches. Estuarine Coastal and Shelf Science 58S (2003) 105-115
9. Lewontin R.C. The apportionment of human diversity. Evolutionary Biology 6 (1972) 381-398
10. Li F., and Xia N. Population structure and genetic diversity of an endangered species, Glyptostrobus pensilis (Cupressaceae). Botany Bulletin Sinica 46 (2005) 155-162
11. Liu Y.G., Chen S.L., Li J., and Li B.F. Genetic diversity in three Japanese flounder (Paralichthys olivaceus) populations revealed by ISSR markers. Aquaculture 255 (2006) 565-572
12. Lombard A.T., and Grant W.S. Biochemical population genetics of the black mussel Choromytilus meridionalis. South African Journal of Zoology 21 (1986) 131-135
13. Lovatelli A. Network of Aquaculture Centres in Asia, Status of mollusc culture in selected Asian countries A (1988). http://www.fao.org/docrep/field/003/ab718E/AB718E04.htm
14. Macleod J.A.A., Thorpe J.P., and Duggan N.A. A biochemical genetic study of population structure in queen scallop (Chlamys opercularis) stocks in the northern Irish Sea. Marine Biology 87 (1985) 77-82
15. Murray-Jones S.E., and Ayre D.J. High levels of gene flow in the surf bivalve, Donax deltoides (Bivalvia: Donacidae) on the East Coast of Australia. Marine Biology 128 (1997) 83-89
16. Nei M. Analysis of gene diversity in subdivided populations. Proceedings of the National Academy of Sciences (USA) 70 (1973) 3321-3323
17. Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89 (1978) 83-590
18. Page R.D.M. TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12 (1996) 357-358
19. Pradeep A.R., Chatterjee S.N., and Nair C.V. Genetic differentiation induced by selection in an inbred population of the silkworm Bombyx mori, revealed by RAPD and ISSR marker systems. Journal of Applied Genetics 46 3 (2005) 291-298
20. Rice W.R. Analyzing tables of statistical tests. Evolution 43 (1989) 223-225
21. Ratnaparkhe M.B., Tekeoglu M., and Muehlbauer F.J. Intersimple-sequence-repeat (ISSR) polymorphisms are useful for finding markers associated with disease resistance gene cluster. Theoretical and Applied Genetics 97 (1998) 515-519
22. Reddy K.D., and Nagaraju A. Genetic characterization of the silkworm Bombyx mori by simple sequence repeat (SSR)-anchored PCR. Heredity 83 (1999) 681-687
23. Ryou D.K. Studies on the population dynamics of surf clam, Mactra veneriformis is Reeve (Bivalvia ) in the coast of Kunsan, Korea. Production. Korean Journal Malacology 13 (1997) 193-201
24. Saavedra C., Zapata1 C., Guerra A., and Alvarez G. Allozyme variation in European populations of the oyster Ostrea edulis. Marine Biology 115 (1993) 85-95
25. Salimath S.S., De Oliveira A.C., and Godwin I.D. Assessment of genomic origins and genetic diversity in the genus Eleusine with DNA markers. Genome 38 (1995) 757-763
26. Wang W.J., and Kong J. Preliminary study on the application of inter-simple sequence repeats (ISSR)-PCR technique in Chinese shrimp (Fenneropenaeus chinensis). Marine Fisheries Research 23 1 (2002) 1-4
27. Wolfe A.D., and Liston A. Contributions of PCR based methods to plant systematics and evolutionary biology. In: Soltis P.S., Soltis D.E., and Doyle (Eds). Molecular Systematics of Plants: DNA Sequencing (1998), Kluwer 43-186
28. Wolfe A.D., Xiang Q.Y., and Kephart S.R. Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable intersimple sequence repeat (ISSR) bands. Molecular Ecology 7 (1998) 1107-1126
29. Yang W., De-Oliveira A.C., Godwin I., Schertz K., and Bennetzen J.L. Comparison of DNA marker technologies in characterizing plant genome diversity: variability in Chinese sorghums. Crop Science 36 (1996) 1669-1676
30. Yeh F.C., and Yang R.C. POPGENE VERSION 1.32 Microsoft Window-based freeware for Population Genetic Analysis, Quick User Guide. University of Alberta And Tim Boyle, Centre for International Forestry Research (1999). http://www.ualberta.ca/~fyeh/fyeh/
31. Zietkiewicz E., Rafalski A., and Labuda D. Genome finger-printing by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20 (1994) 176-183