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1
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0026522204
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Molina T.J., Kishihara K.I., Siderovski D.P., van Ewijk W., Narendran A., Timms E., Wakeham A., Paige C.J., Hartmann K.U., Veillette A., Davidson D., and Mak T.W. Nature 357 (1992) 161
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(1992)
Nature
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Molina, T.J.1
Kishihara, K.I.2
Siderovski, D.P.3
van Ewijk, W.4
Narendran, A.5
Timms, E.6
Wakeham, A.7
Paige, C.J.8
Hartmann, K.U.9
Veillette, A.10
Davidson, D.11
Mak, T.W.12
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8
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0034672069
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Boudier A., Bromm L.O., Lotz M., and Knochel P. Angew. Chem., Int. Ed. 39 (2000) 4414
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(2000)
Angew. Chem., Int. Ed.
, vol.39
, pp. 4414
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Boudier, A.1
Bromm, L.O.2
Lotz, M.3
Knochel, P.4
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9
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0020052842
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Shutske G.M., Setescak L.L., Allen R.C., Davis L., Effland R.C., Ranbom K., Kitzen J.M., Wilker J.C., and Novick W.J. J. Med. Chem. 25 (1982) 36
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(1982)
J. Med. Chem.
, vol.25
, pp. 36
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Shutske, G.M.1
Setescak, L.L.2
Allen, R.C.3
Davis, L.4
Effland, R.C.5
Ranbom, K.6
Kitzen, J.M.7
Wilker, J.C.8
Novick, W.J.9
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10
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33750527510
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note
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® at 0 °C favored formation of sulfoxide. However, small amounts of the sulfone were formed. Both intermediates underwent nucleophilic displacement.
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11
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33750517715
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50 value. The assay Quality Control Criteria inlcuded; Signal/Background: >4; Signal/Noise: >10; % Coefficient of Variance on No ATP Control (Max. Signal): <10.
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12
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33750520094
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50) was determined using the commercially available ProFlour Src-family Kinase Assay (Promega Corporation, Madison, WI; cat. #1271). The assay was performed according to manufacturer's instructions, with 2.8 nM recombinant human active Hck (Invitrogen, Carlsbad, CA #P2908) at an ATP concentration of 10 mM.
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13
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33750495972
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50) was determined using the commercially available ProFlour Src-family Kinase Assay (Promega Corporation, Madison, WI; cat. #1271). The assay was performed according to manufacturer's instructions, with 14.3 nM recombinant human active Src (Invitrogen, Carlsbad, CA #P3044) at an ATP concentration of 10 mM.
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15
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33750531399
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note
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The authors speculate that repulsive interaction between pyrimidine C5 proton and the proton on the imidazole ring forced an unfavorable orientation of this molecule toward the active site of Lck.{A figure is presented}.
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16
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33750496546
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note
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Solubility assay procedure: Solubility of analogs measured in 50 mM phosphate buffer, pH 7.4, ionic strength 0.15 M. The solubilities were determined by shake flask method after 24 h of equilibration. Concentrations in aqueous solutions were determined for supernatant of centrifuged and filtered samples by UV-vis spectrophotometry. Calibration solutions were prepared in acetonitrile/ buffer in 1:1 volume ratio. The samples were diluted with acetonitrile to obtain identical media with calibration standards.
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17
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0033152210
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(1QPC pdb, Research Collaboratory for Structural Bioinformatics)
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Zhu X., Kim J.L., Newcomb J.R., Rose P.E., Stover D.R., Toledo L.M., Zhao H., and Morgenstern K.A. Structure 7 (1999) 651 (1QPC pdb, Research Collaboratory for Structural Bioinformatics)
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(1999)
Structure
, vol.7
, pp. 651
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Zhu, X.1
Kim, J.L.2
Newcomb, J.R.3
Rose, P.E.4
Stover, D.R.5
Toledo, L.M.6
Zhao, H.7
Morgenstern, K.A.8
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18
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0035815138
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Vice S., Bara T., Bauer A., Evans C.A., Ford J., Josien H., McCombie S., Miller M., Nazareno D., Palani A., and Tagat J. J. Org. Chem. 66 (2001) 2487
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(2001)
J. Org. Chem.
, vol.66
, pp. 2487
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Vice, S.1
Bara, T.2
Bauer, A.3
Evans, C.A.4
Ford, J.5
Josien, H.6
McCombie, S.7
Miller, M.8
Nazareno, D.9
Palani, A.10
Tagat, J.11
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19
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33750516257
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note
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6 cells/ml) were harvested and incubated in triplicate in 96-well plates for 30 min at 37 °C in the presence or absence of various concentrations of Lck inhibitors. The cell-inhibitor mixture was then transferred into the wells of the anti CD3ε-coated 96-well plates, and PMA was added to the wells at a final concentration of 10 ng/ml (1 ng/well). The plates were incubated overnight at 37 °C. The amount of IL-2 released into the culture media was measured by ELISA (R&D Systems) and the viability of the cells was determined using the MTS assay (Promega, Madison, WI).
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20
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33750512914
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Measured as percent loss at 4 hours in rat hepatocytes.
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21
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33750499237
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In vitro metabolism assay procedure: In vitro metabolic stability of analogs in plated rat hepatocytes (Sprague-Dawley) obtained from Cedra Corporation. Metabolic activity was determined in triplicate using a total volume of 0.2 ml containing 0.25 μM NCE incubated in rat hepatocyte and Matrigel blank microtiter plates. The plates were maintained at 37 °C throughout the study. Samples were removed from wells at 0, 2, and 4 h, and NCE samples were analyzed by HPLC/MS/MS with reverse-phase chromatography. To improve analytical efficiency, compounds were grouped together (post-incubation) into a multi-compound assay. Samples from like time-points containing the different compounds were combined and an internal standard (1.1 ng/ml Stock) was added. Results for each compound were expressed as the ratio of the compound response area over the internal standard response area. Percent loss was calculated by dividing the 2 and 4 h ratios by the 0 h ratio.
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22
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33750509577
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13b,3c.
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25
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33750502798
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5 space group with approximate unit cell dimensions a = b = 96.4 Å, c = 70.4 Å. Structures were determined by molecular replacement using a structure previously determined in-house. Use of the Advanced Photon Source was supported by the US Department of Energy, Office of Science, Office of Basic Energy Sciences, under Contract No. W-31-109-Eng-38.
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26
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33750521968
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The non-phos Hck construct used in these studies appears to place the activation loop in a conformation resembling activated Lck (3LCK, 1QPC; phosphorylated Y394); the authors speculate inhibitor 12k is capable of inducing such a conformation through interaction with Glu288.
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