-
2
-
-
0037316303
-
A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
-
Bolstad BM, Irizarry RA, Astrand M, Speed TP (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19:185-193
-
(2003)
Bioinformatics
, vol.19
, pp. 185-193
-
-
Bolstad, B.M.1
Irizarry, R.A.2
Astrand, M.3
Speed, T.P.4
-
3
-
-
18844379745
-
Construction and characterization of a normalized whole-life-cycle cDNA library of rice
-
Chu ZH, Peng KM, Zhang LD, Zhou B, Wei J, Wang SP (2003) Construction and characterization of a normalized whole-life-cycle cDNA library of rice. Chinese Sci Bull 48:229-235
-
(2003)
Chinese Sci Bull
, vol.48
, pp. 229-235
-
-
Chu, Z.H.1
Peng, K.M.2
Zhang, L.D.3
Zhou, B.4
Wei, J.5
Wang, S.P.6
-
5
-
-
0038531138
-
Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice
-
Cui KH, Peng SB, Xing YZ, Yu SB, Xu CG, Zhang Q (2003) Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice. Theor Appl Genet 106:649-658
-
(2003)
Theor Appl Genet
, vol.106
, pp. 649-658
-
-
Cui, K.H.1
Peng, S.B.2
Xing, Y.Z.3
Yu, S.B.4
Xu, C.G.5
Zhang, Q.6
-
6
-
-
0001412302
-
Degeneration, albinism and inbreeding
-
Davenport CB (1908) Degeneration, albinism and inbreeding. Science 28: 454-455
-
(1908)
Science
, vol.28
, pp. 454-455
-
-
Davenport, C.B.1
-
7
-
-
4143115644
-
Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis
-
De Paepe A, Vuylsteke M, Van Hummelen P, Zabeau M, Van Der Straeten D (2004) Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. Plant J 39:537-559
-
(2004)
Plant J
, vol.39
, pp. 537-559
-
-
De Paepe, A.1
Vuylsteke, M.2
Van Hummelen, P.3
Zabeau, M.4
Van Der Straeten, D.5
-
9
-
-
26444459778
-
EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods
-
Firnhaber C, Puhler A, Kuster H (2005) EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods. Planta 222:269-283
-
(2005)
Planta
, vol.222
, pp. 269-283
-
-
Firnhaber, C.1
Puhler, A.2
Kuster, H.3
-
10
-
-
0036835918
-
cDNA microarray analysis of fusicoccin-induced changes in gene expression in tomato plants
-
Frick UB, Schaller A (2002) cDNA microarray analysis of fusicoccin-induced changes in gene expression in tomato plants. Planta 216:83-94
-
(2002)
Planta
, vol.216
, pp. 83-94
-
-
Frick, U.B.1
Schaller, A.2
-
11
-
-
33645676933
-
Genome-wide analysis of spatial and temporal gene expression in rice panicle development
-
Furutani I, Sukegawa S, Kyozuka J (2006) Genome-wide analysis of spatial and temporal gene expression in rice panicle development. Plant J 46:503-511
-
(2006)
Plant J
, vol.46
, pp. 503-511
-
-
Furutani, I.1
Sukegawa, S.2
Kyozuka, J.3
-
12
-
-
0034517120
-
Microarray analysis of developing Arabidopsis seeds
-
Girke T, Todd J, Ruuska S, White J, Benning C, Ohlrogge J (2000) Microarray analysis of developing Arabidopsis seeds. Plant Physiol 124:1570-1581
-
(2000)
Plant Physiol
, vol.124
, pp. 1570-1581
-
-
Girke, T.1
Todd, J.2
Ruuska, S.3
White, J.4
Benning, C.5
Ohlrogge, J.6
-
13
-
-
28244479477
-
A microarray-based comparative analysis of gene expression profiles during grain development in transgenic and wild type wheat
-
Gregersen PL, Brinch-Pedersen H, Holm PB (2005) A microarray-based comparative analysis of gene expression profiles during grain development in transgenic and wild type wheat. Transgenic Res 14:887-905
-
(2005)
Transgenic Res
, vol.14
, pp. 887-905
-
-
Gregersen, P.L.1
Brinch-Pedersen, H.2
Holm, P.B.3
-
14
-
-
3142750575
-
Allelic variation of gene expression in maize hybrids
-
Guo M, Rupe MA, Zinselmeier C, Habben J, Bowen BA, Smith OS (2004) Allelic variation of gene expression in maize hybrids. Plant Cell 16:1707-1716
-
(2004)
Plant Cell
, vol.16
, pp. 1707-1716
-
-
Guo, M.1
Rupe, M.A.2
Zinselmeier, C.3
Habben, J.4
Bowen, B.A.5
Smith, O.S.6
-
15
-
-
0037393329
-
Molecular interactions between the specialist herbivore Manduca sexta (lepidoptera, sphingidae) and its natural host Nicotiana attenuata. VI. Microarray analysis reveals that most herbivore-specific transcriptional changes are mediated by fatty acid-amino acid conjugates
-
Halitschke R, Gase K, Hui D, Schmidt DD, Baldwin IT (2003) Molecular interactions between the specialist herbivore Manduca sexta (lepidoptera, sphingidae) and its natural host Nicotiana attenuata. VI. Microarray analysis reveals that most herbivore-specific transcriptional changes are mediated by fatty acid-amino acid conjugates. Plant Physiol 131:1894-1902
-
(2003)
Plant Physiol
, vol.131
, pp. 1894-1902
-
-
Halitschke, R.1
Gase, K.2
Hui, D.3
Schmidt, D.D.4
Baldwin, I.T.5
-
16
-
-
0038120845
-
Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants
-
Hammond JP, Bennett MJ, Bowen HC, Broadley MR, Eastwood DC, May ST, Rahn C, Swarup R, Woolaway KE, White PJ (2003) Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. Plant Physiol 132:578-596
-
(2003)
Plant Physiol
, vol.132
, pp. 578-596
-
-
Hammond, J.P.1
Bennett, M.J.2
Bowen, H.C.3
Broadley, M.R.4
Eastwood, D.C.5
May, S.T.6
Rahn, C.7
Swarup, R.8
Woolaway, K.E.9
White, P.J.10
-
17
-
-
0034671791
-
Orchestrated transcription of key pathways in Arabidopsis by the circadian clock
-
Harmer SL, Hogenesch JB, Straume M, Chang HS, Han B, Zhu T, Wang X, Kreps JA, Kay SA (2000) Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science 290:2110-2113
-
(2000)
Science
, vol.290
, pp. 2110-2113
-
-
Harmer, S.L.1
Hogenesch, J.B.2
Straume, M.3
Chang, H.S.4
Han, B.5
Zhu, T.6
Wang, X.7
Kreps, J.A.8
Kay, S.A.9
-
18
-
-
10744232721
-
A strategy for the integration of QTL, gene expression, and sequence analyses
-
Hitzemann R, Malmanger B, Reed C, Lawler M, Hitzemann B, Coulombe S, Buck K, Rademacher B, Walter N, Polyakov Y, Sikela J, Gensler B, Burgers S, Williams RW, Manly K, Flint J, Talbot C (2003) A strategy for the integration of QTL, gene expression, and sequence analyses. Mamm Genome 14:733-747
-
(2003)
Mamm Genome
, vol.14
, pp. 733-747
-
-
Hitzemann, R.1
Malmanger, B.2
Reed, C.3
Lawler, M.4
Hitzemann, B.5
Coulombe, S.6
Buck, K.7
Rademacher, B.8
Walter, N.9
Polyakov, Y.10
Sikela, J.11
Gensler, B.12
Burgers, S.13
Williams, R.W.14
Manly, K.15
Flint, J.16
Talbot, C.17
-
19
-
-
0037418206
-
Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid
-
Hua J, Xing Y, Wu W, Xu C, Sun X, Yu S, Zhang Q (2003) Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid. Proc Natl Acad Sci USA 100:2574-2579
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 2574-2579
-
-
Hua, J.1
Xing, Y.2
Wu, W.3
Xu, C.4
Sun, X.5
Yu, S.6
Zhang, Q.7
-
20
-
-
0036963688
-
Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance
-
Hua JP, Xing YZ, Xu CG, Sun XL, Yu SB, Zhang Q (2002) Genetic dissection of an elite rice hybrid revealed that heterozygotes are not always advantageous for performance. Genetics 162:1885-1895
-
(2002)
Genetics
, vol.162
, pp. 1885-1895
-
-
Hua, J.P.1
Xing, Y.Z.2
Xu, C.G.3
Sun, X.L.4
Yu, S.B.5
Zhang, Q.6
-
21
-
-
84907150192
-
The map-based sequence of the rice genome
-
International Rice Genome Sequencing Project
-
International Rice Genome Sequencing Project (2005) The map-based sequence of the rice genome. Nature 436:793-800
-
(2005)
Nature
, vol.436
, pp. 793-800
-
-
-
22
-
-
0035028609
-
Gene expression profiles during the initial phase of salt stress in rice
-
Kawasaki S, Borchert C, Deyholos M, Wang H, Brazille S, Kawai K, Galbraith D, Bohnert HJ (2001) Gene expression profiles during the initial phase of salt stress in rice. Plant Cell 13:889-905
-
(2001)
Plant Cell
, vol.13
, pp. 889-905
-
-
Kawasaki, S.1
Borchert, C.2
Deyholos, M.3
Wang, H.4
Brazille, S.5
Kawai, K.6
Galbraith, D.7
Bohnert, H.J.8
-
23
-
-
33644656239
-
The early dark-response in Arabidopsis thaliana revealed by cDNA microarray analysis
-
Kim BH, von Arnim AG (2006) The early dark-response in Arabidopsis thaliana revealed by cDNA microarray analysis. Plant Mol Biol 60:321-342
-
(2006)
Plant Mol Biol
, vol.60
, pp. 321-342
-
-
Kim, B.H.1
Von Arnim, A.G.2
-
24
-
-
1242271304
-
Allele-specific gene expression uncovered
-
Knight JC (2004) Allele-specific gene expression uncovered. Trends Genet 20:113-116
-
(2004)
Trends Genet
, vol.20
, pp. 113-116
-
-
Knight, J.C.1
-
25
-
-
4444225992
-
Monitoring of gene expression profiles and isolation of candidate genes involved in pollination and fertilization in rice (Oryza sativa L.) with a 10K cDNA microarray
-
Lan L, Chen W, Lai Y, Suo J, Kong Z, Li C, Lu Y, Zhang Y, Zhao X, Zhang X, Zhang Y, Han B, Cheng J, Xue Y (2004) Monitoring of gene expression profiles and isolation of candidate genes involved in pollination and fertilization in rice (Oryza sativa L.) with a 10K cDNA microarray. Plant Mol Biol 54:471-487
-
(2004)
Plant Mol Biol
, vol.54
, pp. 471-487
-
-
Lan, L.1
Chen, W.2
Lai, Y.3
Suo, J.4
Kong, Z.5
Li, C.6
Lu, Y.7
Zhang, Y.8
Zhao, X.9
Zhang, X.10
Zhang, Y.11
Han, B.12
Cheng, J.13
Xue, Y.14
-
26
-
-
1542542442
-
Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant
-
Leonhardt N, Kwak JM, Robert N, Waner D, Leonhardt G, Schroeder JI (2004) Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant. Plant Cell 16:596-615
-
(2004)
Plant Cell
, vol.16
, pp. 596-615
-
-
Leonhardt, N.1
Kwak, J.M.2
Robert, N.3
Waner, D.4
Leonhardt, G.5
Schroeder, J.I.6
-
27
-
-
0033929144
-
Analyzing quantitative trait loci for yield using a vegetatively replicated F2 population from a cross between the parents of an elite rice hybrid
-
Li JX, Yu SB, Xu CG, Tan YF, Gao YJ, Li XH, Zhang Q (2000) Analyzing quantitative trait loci for yield using a vegetatively replicated F2 population from a cross between the parents of an elite rice hybrid. Theor Appl Genet 101:248-254
-
(2000)
Theor Appl Genet
, vol.101
, pp. 248-254
-
-
Li, J.X.1
Yu, S.B.2
Xu, C.G.3
Tan, Y.F.4
Gao, Y.J.5
Li, X.H.6
Zhang, Q.7
-
28
-
-
0034851443
-
Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. I. Biomass and grain yield
-
Li ZK, Luo LJ, Mei HW, Wang DL, Shu QY, Tabien R, Zhong DB, Ying CS, Stansel JW, Khush GS, Paterson AH (2001) Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. I. Biomass and grain yield. Genetics 158:1737-1753
-
(2001)
Genetics
, vol.158
, pp. 1737-1753
-
-
Li, Z.K.1
Luo, L.J.2
Mei, H.W.3
Wang, D.L.4
Shu, Q.Y.5
Tabien, R.6
Zhong, D.B.7
Ying, C.S.8
Stansel, J.W.9
Khush, G.S.10
Paterson, A.H.11
-
29
-
-
33646344515
-
Expression profiles of 10,422 genes at early stage of low nitrogen stress in rice assayed using a cDNA microarray
-
Lian X, Wang S, Zhang J, Feng Q, Zhang L, Fan D, Li X, Yuan D, Han B, Zhang Q (2006) Expression profiles of 10,422 genes at early stage of low nitrogen stress in rice assayed using a cDNA microarray. Plant Mol Biol 60:617-631
-
(2006)
Plant Mol Biol
, vol.60
, pp. 617-631
-
-
Lian, X.1
Wang, S.2
Zhang, J.3
Feng, Q.4
Zhang, L.5
Fan, D.6
Li, X.7
Yuan, D.8
Han, B.9
Zhang, Q.10
-
30
-
-
0012789869
-
Allelic variation in gene expression is common in the human genome
-
Lo HS, Wang Z, Hu Y, Yang HH, Gere S, Buetow KH, Lee MP (2003) Allelic variation in gene expression is common in the human genome. Genome Res 13:1855-1862
-
(2003)
Genome Res
, vol.13
, pp. 1855-1862
-
-
Lo, H.S.1
Wang, Z.2
Hu, Y.3
Yang, H.H.4
Gere, S.5
Buetow, K.H.6
Lee, M.P.7
-
31
-
-
0034845083
-
Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components
-
Luo LJ, Li ZK, Mei HW, Shu QY, Tabien R, Zhong DB, Ying CS, Stansel JW, Khush GS, Paterson AH (2001) Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice. II. Grain yield components. Genetics 158:1755-1771
-
(2001)
Genetics
, vol.158
, pp. 1755-1771
-
-
Luo, L.J.1
Li, Z.K.2
Mei, H.W.3
Shu, Q.Y.4
Tabien, R.5
Zhong, D.B.6
Ying, C.S.7
Stansel, J.W.8
Khush, G.S.9
Paterson, A.H.10
-
32
-
-
0036800844
-
Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis
-
Ma L, Gao Y, Qu L, Chen Z, Li J, Zhao H, Deng XW (2002) Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. Plant Cell 14:2383-2398
-
(2002)
Plant Cell
, vol.14
, pp. 2383-2398
-
-
Ma, L.1
Gao, Y.2
Qu, L.3
Chen, Z.4
Li, J.5
Zhao, H.6
Deng, X.W.7
-
33
-
-
0033662422
-
The transcriptome of Arabidopsis thaliana during systemic acquired resistance
-
Maleck K, Levine A, Eulgem T, Morgan A, Schmid J, Lawton KA, Dangl JL, Dietrich RA (2000) The transcriptome of Arabidopsis thaliana during systemic acquired resistance. Nat Genet 26:403-410
-
(2000)
Nat Genet
, vol.26
, pp. 403-410
-
-
Maleck, K.1
Levine, A.2
Eulgem, T.3
Morgan, A.4
Schmid, J.5
Lawton, K.A.6
Dangl, J.L.7
Dietrich, R.A.8
-
34
-
-
16644394132
-
Study of Arabidopsis thaliana resistome in response to cucumber mosaic virus infection using whole genome microarray
-
Marathe R, Guan Z, Anandalakshmi R, Zhao H, Dinesh-Kumar SP (2004) Study of Arabidopsis thaliana resistome in response to cucumber mosaic virus infection using whole genome microarray. Plant Mol Biol 55:501-520
-
(2004)
Plant Mol Biol
, vol.55
, pp. 501-520
-
-
Marathe, R.1
Guan, Z.2
Anandalakshmi, R.3
Zhao, H.4
Dinesh-Kumar, S.P.5
-
35
-
-
1942533595
-
Heterosis of biomass production in Arabidopsis. Establishment during early development
-
Meyer RC, Torjek O, Becher M, Altmann T (2004) Heterosis of biomass production in Arabidopsis. Establishment during early development. Plant Physiol 134:1813-1823
-
(2004)
Plant Physiol
, vol.134
, pp. 1813-1823
-
-
Meyer, R.C.1
Torjek, O.2
Becher, M.3
Altmann, T.4
-
36
-
-
0029069241
-
Interval mapping of viability loci causing heterosis in Arabidopsis
-
Mitchell-Olds T (1995) Interval mapping of viability loci causing heterosis in Arabidopsis. Genetics 140:1105-1109
-
(1995)
Genetics
, vol.140
, pp. 1105-1109
-
-
Mitchell-Olds, T.1
-
37
-
-
33644888897
-
Identification of expression profiles of sorghum genes in response to greenbug phloem-feeding using cDNA subtraction and microarray analysis
-
Park SJ, Huang Y, Ayoubi P (2006) Identification of expression profiles of sorghum genes in response to greenbug phloem-feeding using cDNA subtraction and microarray analysis. Planta 223:932-947
-
(2006)
Planta
, vol.223
, pp. 932-947
-
-
Park, S.J.1
Huang, Y.2
Ayoubi, P.3
-
38
-
-
7444235907
-
Cis-acting regulatory variation in the human genome
-
Pastinen T, Hudson TJ (2004) Cis-acting regulatory variation in the human genome. Science 306:647-650
-
(2004)
Science
, vol.306
, pp. 647-650
-
-
Pastinen, T.1
Hudson, T.J.2
-
39
-
-
9144230726
-
Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses
-
Rabbani MA, Maruyama K, Abe H, Khan MA, Katsura K, Ito Y, Yoshiwara K, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2003) Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses. Plant Physiol 133:1755-1767
-
(2003)
Plant Physiol
, vol.133
, pp. 1755-1767
-
-
Rabbani, M.A.1
Maruyama, K.2
Abe, H.3
Khan, M.A.4
Katsura, K.5
Ito, Y.6
Yoshiwara, K.7
Seki, M.8
Shinozaki, K.9
Yamaguchi-Shinozaki, K.10
-
40
-
-
0037456823
-
Genetics of gene expression surveyed in maize, mouse and man
-
Schadt EE, Monks SA, Drake TA, Lusis AJ, Che N, Colinayo V, Ruff TG, Milligan SB, Lamb JR, Cavet G, Linsley PS, Mao M, Stoughton RB, Friend SH (2003) Genetics of gene expression surveyed in maize, mouse and man. Nature 422:297-302
-
(2003)
Nature
, vol.422
, pp. 297-302
-
-
Schadt, E.E.1
Monks, S.A.2
Drake, T.A.3
Lusis, A.J.4
Che, N.5
Colinayo, V.6
Ruff, T.G.7
Milligan, S.B.8
Lamb, J.R.9
Cavet, G.10
Linsley, P.S.11
Mao, M.12
Stoughton, R.B.13
Friend, S.H.14
-
41
-
-
0035108613
-
Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis
-
Schaffer R, Landgraf J, Accerbi M, Simon V, Larson M, Wisman E (2001) Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis. Plant Cell 13:113-123
-
(2001)
Plant Cell
, vol.13
, pp. 113-123
-
-
Schaffer, R.1
Landgraf, J.2
Accerbi, M.3
Simon, V.4
Larson, M.5
Wisman, E.6
-
42
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
Schena M, Shalon D, Davis RW, Brown PO (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270:467-470
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
43
-
-
0034633788
-
Coordinated plant defense responses in Arabidopsis revealed by microarray analysis
-
Schenk PM, Kazan K, Wilson I, Anderson JP, Richmond T, Somerville SC, Manners JM (2000) Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proc Natl Acad Sci USA 97:11655-11660
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 11655-11660
-
-
Schenk, P.M.1
Kazan, K.2
Wilson, I.3
Anderson, J.P.4
Richmond, T.5
Somerville, S.C.6
Manners, J.M.7
-
44
-
-
0036679053
-
Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray
-
Seki M, Narusaka M, Ishida J, Nanjo T, Fujita M, Oono Y, Kamiya A, Nakajima M, Enju A, Sakurai T, Satou M, Akiyama K, Taji T, Yamaguchi-Shinozaki K, Carninci P, Kawai J, Hayashizaki Y, Shinozaki K (2002) Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray. Plant J 31:279-292
-
(2002)
Plant J
, vol.31
, pp. 279-292
-
-
Seki, M.1
Narusaka, M.2
Ishida, J.3
Nanjo, T.4
Fujita, M.5
Oono, Y.6
Kamiya, A.7
Nakajima, M.8
Enju, A.9
Sakurai, T.10
Satou, M.11
Akiyama, K.12
Taji, T.13
Yamaguchi-Shinozaki, K.14
Carninci, P.15
Kawai, J.16
Hayashizaki, Y.17
Shinozaki, K.18
-
45
-
-
26444601151
-
A pilot study of transcription unit analysis in rice using oligonucleotide tiling-path microarray
-
Stolc V, Li L, Wang X, Li X, Su N, Tongprasit W, Han B, Xue Y, Li J, Snyder M, Gerstein M, Wang J, Deng XW (2005) A pilot study of transcription unit analysis in rice using oligonucleotide tiling-path microarray. Plant Mol Biol 59:137-149
-
(2005)
Plant Mol Biol
, vol.59
, pp. 137-149
-
-
Stolc, V.1
Li, L.2
Wang, X.3
Li, X.4
Su, N.5
Tongprasit, W.6
Han, B.7
Xue, Y.8
Li, J.9
Snyder, M.10
Gerstein, M.11
Wang, J.12
Deng, X.W.13
-
46
-
-
22244458625
-
Applications of DNA microarrays in biology
-
Stoughton RB (2005) Applications of DNA microarrays in biology. Annu Rev Biochem 74:53-82
-
(2005)
Annu Rev Biochem
, vol.74
, pp. 53-82
-
-
Stoughton, R.B.1
-
47
-
-
0000659678
-
Heterosis in plant breeding
-
Stuber CW (1994) Heterosis in plant breeding. Plant Breed Rev 12:227-251
-
(1994)
Plant Breed Rev
, vol.12
, pp. 227-251
-
-
Stuber, C.W.1
-
48
-
-
0026670272
-
Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers
-
Stuber CW, Lincoln SE, Wolff DW, Helentjaris T, Lander ES (1992) Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers. Genetics 132:823-839
-
(1992)
Genetics
, vol.132
, pp. 823-839
-
-
Stuber, C.W.1
Lincoln, S.E.2
Wolff, D.W.3
Helentjaris, T.4
Lander, E.S.5
-
49
-
-
0032893556
-
Differential gene expression between wheat hybrids and their parental inbreds in seedling leaves
-
123
-
Sun QX, Ni ZF, Liu ZY (1999) Differential gene expression between wheat hybrids and their parental inbreds in seedling leaves. Euphytica 106:11-17, 123
-
(1999)
Euphytica
, vol.106
, pp. 11-17
-
-
Sun, Q.X.1
Ni, Z.F.2
Liu, Z.Y.3
-
50
-
-
15544371510
-
Molecular marker genotypes, heterozygosity and genetic interactions explain heterosis in Arabidopsis thaliana
-
Syed NH, Chen ZJ (2005) Molecular marker genotypes, heterozygosity and genetic interactions explain heterosis in Arabidopsis thaliana. Heredity 94:295-304
-
(2005)
Heredity
, vol.94
, pp. 295-304
-
-
Syed, N.H.1
Chen, Z.J.2
-
51
-
-
0035979317
-
Multiple transcription-factor genes are early targets of phytochrome A signaling
-
Tepperman JM, Zhu T, Chang HS, Wang X, Quail PH (2001) Multiple transcription-factor genes are early targets of phytochrome A signaling. Proc Natl Acad Sci USA 98:9437-9442
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 9437-9442
-
-
Tepperman, J.M.1
Zhu, T.2
Chang, H.S.3
Wang, X.4
Quail, P.H.5
-
52
-
-
0037331226
-
Relationship between differential gene expression patterns in functional leaves of maize inbreds and hybrids at spikelet differentiation stage and heterosis
-
Tian ZY, Dai JR (2003) Relationship between differential gene expression patterns in functional leaves of maize inbreds and hybrids at spikelet differentiation stage and heterosis. Acta Genetica Sinica 30:154-162
-
(2003)
Acta Genetica Sinica
, vol.30
, pp. 154-162
-
-
Tian, Z.Y.1
Dai, J.R.2
-
53
-
-
0037783247
-
Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism
-
Wang R, Okamoto M, Xing X, Crawford NM (2003). Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism. Plant Physiol 132:556-567
-
(2003)
Plant Physiol
, vol.132
, pp. 556-567
-
-
Wang, R.1
Okamoto, M.2
Xing, X.3
Crawford, N.M.4
-
54
-
-
24744435314
-
Microarray analysis of gene expression involved in anther development in rice (Oryza sativa L.)
-
Wang Z, Liang Y, Li C, Xu Y, Lan L, Zhao D, Chen C, Xu Z, Xue Y, Chong K (2005) Microarray analysis of gene expression involved in anther development in rice (Oryza sativa L.). Plant Mol Biol 58:721-737
-
(2005)
Plant Mol Biol
, vol.58
, pp. 721-737
-
-
Wang, Z.1
Liang, Y.2
Li, C.3
Xu, Y.4
Lan, L.5
Zhao, D.6
Chen, C.7
Xu, Z.8
Xue, Y.9
Chong, K.10
-
55
-
-
0345117252
-
Cloning and characterization of leaf cDNAs that are differentially expressed between wheat hybrids and their parents
-
Wu LM, Ni ZF, Meng FR, Lin Z, Sun QX (2003a) Cloning and characterization of leaf cDNAs that are differentially expressed between wheat hybrids and their parents. Mol Genet Genomics 270:281-286
-
(2003)
Mol Genet Genomics
, vol.270
, pp. 281-286
-
-
Wu, L.M.1
Ni, Z.F.2
Meng, F.R.3
Lin, Z.4
Sun, Q.X.5
-
56
-
-
0038038594
-
Phosphate starvation triggers distinct alterations of genome expression in Arabidopsis roots and leaves
-
Wu P, Ma L, Hou X, Wang M, Wu Y, Liu F, Deng XW (2003b) Phosphate starvation triggers distinct alterations of genome expression in Arabidopsis roots and leaves. Plant Physiol 132:1260-1271
-
(2003)
Plant Physiol
, vol.132
, pp. 1260-1271
-
-
Wu, P.1
Ma, L.2
Hou, X.3
Wang, M.4
Wu, Y.5
Liu, F.6
Deng, X.W.7
-
57
-
-
0029035408
-
Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers
-
Xiao J, Li J, Yuan L, Tanksley SD (1995) Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers. Genetics 140:745-754
-
(1995)
Genetics
, vol.140
, pp. 745-754
-
-
Xiao, J.1
Li, J.2
Yuan, L.3
Tanksley, S.D.4
-
58
-
-
0036937858
-
Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice
-
Xing YZ, Tan YF, Hua JP, Sun XL, Xu CG, Zhang Q (2002) Characterization of the main effects, epistatic effects and their environmental interactions of QTLs on the genetic basis of yield traits in rice. Theor Appl Genet 105:248-257
-
(2002)
Theor Appl Genet
, vol.105
, pp. 248-257
-
-
Xing, Y.Z.1
Tan, Y.F.2
Hua, J.P.3
Sun, X.L.4
Xu, C.G.5
Zhang, Q.6
-
59
-
-
0031960404
-
Relationships of differential gene expression in leaves with heterosis and heterozygosity in a rice diallel cross
-
Xiong LZ, Yang GP, Xu CG, Zhang Q, Saghai Maroof MA (1998) Relationships of differential gene expression in leaves with heterosis and heterozygosity in a rice diallel cross. Molecular Breeding 4:129-136
-
(1998)
Molecular Breeding
, vol.4
, pp. 129-136
-
-
Xiong, L.Z.1
Yang, G.P.2
Xu, C.G.3
Zhang, Q.4
Saghai Maroof, M.A.5
-
61
-
-
3042538223
-
Microarray analysis of brassinosteroids- and gibberellin-regulated gene expression in rice seedlings
-
Yang GX, Jan A, Shen SH, Yazaki J, Ishikawa M, Shimatani Z, Kishimoto N, Kikuchi S, Matsumoto H, Komatsu S (2004) Microarray analysis of brassinosteroids- and gibberellin-regulated gene expression in rice seedlings. Mol Genet Genomics 271:468-478
-
(2004)
Mol Genet Genomics
, vol.271
, pp. 468-478
-
-
Yang, G.X.1
Jan, A.2
Shen, S.H.3
Yazaki, J.4
Ishikawa, M.5
Shimatani, Z.6
Kishimoto, N.7
Kikuchi, S.8
Matsumoto, H.9
Komatsu, S.10
-
62
-
-
0030829363
-
Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid
-
Yu SB, Li JX, Xu CG, Tan YF, Gao YJ, Li XH, Zhang Q, Maroof MA (1997) Importance of epistasis as the genetic basis of heterosis in an elite rice hybrid. Proc Natl Acad Sci USA 94:9226-9231
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 9226-9231
-
-
Yu, S.B.1
Li, J.X.2
Xu, C.G.3
Tan, Y.F.4
Gao, Y.J.5
Li, X.H.6
Zhang, Q.7
Maroof, M.A.8
-
63
-
-
0003053613
-
Hybrid rice breeding in china
-
Virmani SS, Siddiq EA, Muralidharan K (eds). International Rice Research Institute, Los Banos
-
Yuan LP (1998) Hybrid rice breeding in china. In: Virmani SS, Siddiq EA, Muralidharan K (eds) Advances in Hybrid Rice Technology. International Rice Research Institute, Los Banos, pp 27-33
-
(1998)
Advances in Hybrid Rice Technology
, pp. 27-33
-
-
Yuan, L.P.1
-
64
-
-
20444502606
-
Features of the expressed sequences revealed by a large-scale analysis of ESTs from a normalized cDNA library of the elite indica rice cultivar Minghui 63
-
Zhang J, Feng Q, Jin C, Qiu D, Zhang L, Xie K, Yuan D, Han B, Zhang Q, Wang S (2005) Features of the expressed sequences revealed by a large-scale analysis of ESTs from a normalized cDNA library of the elite indica rice cultivar Minghui 63. Plant J 42:772-780
-
(2005)
Plant J
, vol.42
, pp. 772-780
-
-
Zhang, J.1
Feng, Q.2
Jin, C.3
Qiu, D.4
Zhang, L.5
Xie, K.6
Yuan, D.7
Han, B.8
Zhang, Q.9
Wang, S.10
-
65
-
-
0028191783
-
A diallel analysis of heterosis in elite hybrid rice based on RFLPs and microsatellites
-
Zhang Q, Gao YJ, Yang S, Ragab R, Saghai Maroof MA, Li ZB (1994) A diallel analysis of heterosis in elite hybrid rice based on RFLPs and microsatellites. Theor Appl Genet 89:185-192
-
(1994)
Theor Appl Genet
, vol.89
, pp. 185-192
-
-
Zhang, Q.1
Gao, Y.J.2
Yang, S.3
Ragab, R.4
Saghai Maroof, M.A.5
Li, Z.B.6
-
66
-
-
0030461996
-
Molecular marker heterozygosity and hybrid performance in indica and japonica rice
-
Zhang Q, Zhou ZQ, Yang GP, Xu CG, Liu KD, Saghai Maroof MA (1996) Molecular marker heterozygosity and hybrid performance in indica and japonica rice. Theor Appl Genet 93:1218-1224
-
(1996)
Theor Appl Genet
, vol.93
, pp. 1218-1224
-
-
Zhang, Q.1
Zhou, Z.Q.2
Yang, G.P.3
Xu, C.G.4
Liu, K.D.5
Saghai Maroof, M.A.6
-
67
-
-
1642547009
-
Profiling ethylene-regulated gene expression in Arabidopsis thaliana by microarray analysis
-
Zhong GV, Burns JK (2003) Profiling ethylene-regulated gene expression in Arabidopsis thaliana by microarray analysis. Plant Mol Biol 53:117-131
-
(2003)
Plant Mol Biol
, vol.53
, pp. 117-131
-
-
Zhong, G.V.1
Burns, J.K.2
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