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Volumn 2, Issue 10, 2006, Pages 1292-1300

From bad to good: Fitness reversals and the ascent of deleterious mutations

Author keywords

[No Author keywords available]

Indexed keywords

HEALTH; NUCLEIC ACIDS;

EID: 33750485329     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.0020141     Document Type: Article
Times cited : (35)

References (45)
  • 1
    • 0003918633 scopus 로고
    • Cambridge (United Kingdom): Cambridge University Press
    • Maynard Smith J (1978) The evolution of sex. Cambridge (United Kingdom): Cambridge University Press. 222 p.
    • (1978) The Evolution of Sex
    • Maynard Smith, J.1
  • 2
    • 0028229790 scopus 로고
    • A ruby in the rubbish: Beneficial mutations, deleterious mutations, and the evolution of sex
    • Peck JR (1994) A ruby in the rubbish: Beneficial mutations, deleterious mutations, and the evolution of sex. Genetics 137: 597-606.
    • (1994) Genetics , vol.137 , pp. 597-606
    • Peck, J.R.1
  • 3
    • 0342657165 scopus 로고    scopus 로고
    • The rate of adaptation in asexuals
    • Orr HA (2000) The rate of adaptation in asexuals. Genetics 155: 961-968.
    • (2000) Genetics , vol.155 , pp. 961-968
    • Orr, H.A.1
  • 4
    • 0036741701 scopus 로고    scopus 로고
    • The effect of deleterious alleles on adaptation in asexual populations
    • Johnson T, Barton NH (2002) The effect of deleterious alleles on adaptation in asexual populations. Genetics 162: 395-411.
    • (2002) Genetics , vol.162 , pp. 395-411
    • Johnson, T.1    Barton, N.H.2
  • 5
    • 3543125439 scopus 로고    scopus 로고
    • Adaptive evolution of asexual populations under Muller's ratchet
    • Bachtrog D, Gordo I (2004) Adaptive evolution of asexual populations under Muller's ratchet. Evolution Int J Org Evolution 58: 1403-1413.
    • (2004) Evolution Int J Org Evolution , vol.58 , pp. 1403-1413
    • Bachtrog, D.1    Gordo, I.2
  • 6
    • 7344230525 scopus 로고    scopus 로고
    • Some evolutionary consequences of deleterious mutations
    • Charlesworth B, Charlesworth D (1998) Some evolutionary consequences of deleterious mutations. Genetica 102/103: 3-19.
    • (1998) Genetica , vol.102-103 , pp. 3-19
    • Charlesworth, B.1    Charlesworth, D.2
  • 7
    • 0015133749 scopus 로고
    • Self-organization of matter and the evolution of biological macromolecules
    • Eigen M (1971) Self-organization of matter and the evolution of biological macromolecules. Naturwissenschaften 58: 465-523.
    • (1971) Naturwissenschaften , vol.58 , pp. 465-523
    • Eigen, M.1
  • 8
    • 34547553128 scopus 로고    scopus 로고
    • Quasispecies made simple
    • DOI: 10.1371/journal.pcbi.0010061
    • Bull JJ, Meyers LA, Lachmann M (2005) Quasispecies made simple. PLoS Comput Biol 1 (6): 0450-0460. DOI: 10.1371/journal.pcbi.0010061
    • (2005) PLoS Comput Biol , vol.1 , Issue.6 , pp. 0450-0460
    • Bull, J.J.1    Meyers, L.A.2    Lachmann, M.3
  • 9
    • 1842587751 scopus 로고    scopus 로고
    • Genome size: Does bigger mean worse?
    • Charlesworth B, Barton N (2004) Genome size: Does bigger mean worse? Curr Biol 14: R233-R235.
    • (2004) Curr Biol , vol.14
    • Charlesworth, B.1    Barton, N.2
  • 10
    • 0032893933 scopus 로고    scopus 로고
    • Beneficial mutations, hitchhiking and the evolution of mutation rates in sexual populations
    • Johnson T (1999) Beneficial mutations, hitchhiking and the evolution of mutation rates in sexual populations. Genetics 151: 1621-1631.
    • (1999) Genetics , vol.151 , pp. 1621-1631
    • Johnson, T.1
  • 11
    • 0033927343 scopus 로고    scopus 로고
    • Joint effects of genetic hitchhiking and background selection on neutral variation
    • Kim Y, Stephan W (2000) Joint effects of genetic hitchhiking and background selection on neutral variation. Genetics 155: 1415-1427.
    • (2000) Genetics , vol.155 , pp. 1415-1427
    • Kim, Y.1    Stephan, W.2
  • 12
    • 21044446722 scopus 로고    scopus 로고
    • Rapid evolutionary escape by large populations from local fitness peaks is likely in nature
    • Weinreich DM, Chao L (2005) Rapid evolutionary escape by large populations from local fitness peaks is likely in nature. Evolution Int J Org Evolution 59: 1175-1182.
    • (2005) Evolution Int J Org Evolution , vol.59 , pp. 1175-1182
    • Weinreich, D.M.1    Chao, L.2
  • 13
    • 0034615640 scopus 로고    scopus 로고
    • Pervasive compensatory adaptation in Escherichia coli
    • Moore FBG, Rozen DE, Lenski RE (2000) Pervasive compensatory adaptation in Escherichia coli. Proc R Soc London B 267: 515-522.
    • (2000) Proc R Soc London B , vol.267 , pp. 515-522
    • Moore, F.B.G.1    Rozen, D.E.2    Lenski, R.E.3
  • 14
    • 0033055004 scopus 로고    scopus 로고
    • Evolution by small steps and rugged landscapes in the RNA virus phi6
    • Burch CL, Chao L (1999) Evolution by small steps and rugged landscapes in the RNA virus phi6. Genetics 151: 921-927.
    • (1999) Genetics , vol.151 , pp. 921-927
    • Burch, C.L.1    Chao, L.2
  • 15
    • 21044438202 scopus 로고    scopus 로고
    • The rate of compensatory mutation in the DNA bacteriophage phiX174
    • Poon A, Chao L (2005) The rate of compensatory mutation in the DNA bacteriophage phiX174. Genetics 170: 989-999.
    • (2005) Genetics , vol.170 , pp. 989-999
    • Poon, A.1    Chao, L.2
  • 17
    • 0347361666 scopus 로고    scopus 로고
    • Distinguishing the hitchhiking and background selection models
    • Innan H, Stephan W (2003) Distinguishing the hitchhiking and background selection models. Genetics 165: 2307-2312.
    • (2003) Genetics , vol.165 , pp. 2307-2312
    • Innan, H.1    Stephan, W.2
  • 18
    • 52449148668 scopus 로고
    • The role of compensatory neutral mutations in molecular evolution
    • Kimura M (1985) The role of compensatory neutral mutations in molecular evolution. J Genetics 64: 7-19.
    • (1985) J Genetics , vol.64 , pp. 7-19
    • Kimura, M.1
  • 19
    • 0030030533 scopus 로고    scopus 로고
    • Smoothness within ruggedness: The role of neutrality in adaptation
    • Huynen MA, Stadler PF, Fontana W (1996) Smoothness within ruggedness: The role of neutrality in adaptation. Proc Natl Acad Sci 93: 397-401.
    • (1996) Proc Natl Acad Sci , vol.93 , pp. 397-401
    • Huynen, M.A.1    Stadler, P.F.2    Fontana, W.3
  • 20
    • 0032577365 scopus 로고    scopus 로고
    • Continuity in evolution: On the nature of transitions
    • Fontana W, Schuster P (1998) Continuity in evolution: On the nature of transitions. Science 280: 1451-1455.
    • (1998) Science , vol.280 , pp. 1451-1455
    • Fontana, W.1    Schuster, P.2
  • 22
    • 0034667684 scopus 로고    scopus 로고
    • Plasticity, modularity and evolvability in RNA
    • Ancel L, Fontana W (2000) Plasticity, modularity and evolvability in RNA. J Exp Zoology 288: 242-283.
    • (2000) J Exp Zoology , vol.288 , pp. 242-283
    • Ancel, L.1    Fontana, W.2
  • 23
    • 0034919014 scopus 로고    scopus 로고
    • Interaction between directional epistasis and average mutational effects
    • Wilke CO, Adami C (2001) Interaction between directional epistasis and average mutational effects. Proc R Soc London B 268: 1469-1474.
    • (2001) Proc R Soc London B , vol.268 , pp. 1469-1474
    • Wilke, C.O.1    Adami, C.2
  • 24
    • 25444456622 scopus 로고    scopus 로고
    • Distributions of beneficial fitness effects in RNA
    • Cowperthwaite MC, Bull JJ, Meyers LA (2005) Distributions of beneficial fitness effects in RNA. Genetics 170: 1449-1457.
    • (2005) Genetics , vol.170 , pp. 1449-1457
    • Cowperthwaite, M.C.1    Bull, J.J.2    Meyers, L.A.3
  • 25
    • 0023648965 scopus 로고
    • A computer model of evolutionary optimization
    • Fontana W, Schuster P (1987) A computer model of evolutionary optimization. Biophys Chem 26: 123-147.
    • (1987) Biophys Chem , vol.26 , pp. 123-147
    • Fontana, W.1    Schuster, P.2
  • 27
    • 0033757940 scopus 로고    scopus 로고
    • Structural genomics of RNA
    • Doudna JA (2000) Structural genomics of RNA. Nat Struct Biol 7: 954-956.
    • (2000) Nat Struct Biol , vol.7 , pp. 954-956
    • Doudna, J.A.1
  • 28
    • 0024477261 scopus 로고
    • On finding all suboptimal foldings of an RNA molecule
    • Zuker M (1989) On finding all suboptimal foldings of an RNA molecule. Science 244: 48-52.
    • (1989) Science , vol.244 , pp. 48-52
    • Zuker, M.1
  • 30
    • 0033080745 scopus 로고    scopus 로고
    • Complete suboptimal folding of RNA and the stability of secondary structures
    • Wuchty S, Fontana W, Hofacker IL, Schuster P (1999) Complete suboptimal folding of RNA and the stability of secondary structures. Biopolymers 49: 145-165.
    • (1999) Biopolymers , vol.49 , pp. 145-165
    • Wuchty, S.1    Fontana, W.2    Hofacker, I.L.3    Schuster, P.4
  • 31
    • 0019082587 scopus 로고
    • Fast algorithm for predicting the secondary structure of single-stranded RNA
    • Nussinov R, Jacboson A (1980) Fast algorithm for predicting the secondary structure of single-stranded RNA. Proc Natl Acad Sci 77: 6309-6313.
    • (1980) Proc Natl Acad Sci , vol.77 , pp. 6309-6313
    • Nussinov, R.1    Jacboson, A.2
  • 32
    • 0019876473 scopus 로고
    • Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
    • Zuker M, Stiegler P (1981) Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res 9: 133-148.
    • (1981) Nucleic Acids Res , vol.9 , pp. 133-148
    • Zuker, M.1    Stiegler, P.2
  • 33
    • 2942652397 scopus 로고    scopus 로고
    • The robustness of naturally and artificially selected nucleic acid secondary structures
    • Meyers LA, Lee JF, Cowperthwaite M, Ellington AD (2004) The robustness of naturally and artificially selected nucleic acid secondary structures. J Mol Evol 58: 618-625.
    • (2004) J Mol Evol , vol.58 , pp. 618-625
    • Meyers, L.A.1    Lee, J.F.2    Cowperthwaite, M.3    Ellington, A.D.4
  • 35
    • 0000896629 scopus 로고
    • Some problems of stochastic processes in genetics
    • Kimura M (1957) Some problems of stochastic processes in genetics. Ann Math Stat 28: 882-901.
    • (1957) Ann Math Stat , vol.28 , pp. 882-901
    • Kimura, M.1
  • 36
    • 0000800333 scopus 로고
    • On the probability of fixation of mutant genes in a population
    • Kimura M (1962) On the probability of fixation of mutant genes in a population. Genetics 47: 713-719.
    • (1962) Genetics , vol.47 , pp. 713-719
    • Kimura, M.1
  • 37
    • 21044435697 scopus 로고    scopus 로고
    • Perspective: Sign epistasis and genetic constraint on evolutionary trajectories
    • Weinreich DM, Watson RA, Chao L (2005) Perspective: Sign epistasis and genetic constraint on evolutionary trajectories. Evolution 59: 1165-1174.
    • (2005) Evolution , vol.59 , pp. 1165-1174
    • Weinreich, D.M.1    Watson, R.A.2    Chao, L.3
  • 38
    • 27144538817 scopus 로고    scopus 로고
    • The biochemical architecture of an ancient adaptive landscape
    • Lunzer M, Miller SP, Felsheim R, Dean AM (2005) The biochemical architecture of an ancient adaptive landscape. Science 310: 499-501.
    • (2005) Science , vol.310 , pp. 499-501
    • Lunzer, M.1    Miller, S.P.2    Felsheim, R.3    Dean, A.M.4
  • 39
    • 33645666942 scopus 로고    scopus 로고
    • Darwinian evolution can follow only very few mutational paths to fitter proteins
    • Weinreich DM, Delaney NF, DePristo MA, Hartl DL (2006) Darwinian evolution can follow only very few mutational paths to fitter proteins. Science 312: 111-114.
    • (2006) Science , vol.312 , pp. 111-114
    • Weinreich, D.M.1    Delaney, N.F.2    DePristo, M.A.3    Hartl, D.L.4
  • 40
    • 9444269272 scopus 로고    scopus 로고
    • Compensated deleterious mutations in insect genomes
    • Kulathinal RJ, Bettencourt BR, Hartl DL (2004) Compensated deleterious mutations in insect genomes. Science 306: 1553-1554.
    • (2004) Science , vol.306 , pp. 1553-1554
    • Kulathinal, R.J.1    Bettencourt, B.R.2    Hartl, D.L.3
  • 42
    • 0038668776 scopus 로고    scopus 로고
    • The evolutionary origin of complex features
    • Lenski RE, Ofria C, Pennock RT, Adami C (2003) The evolutionary origin of complex features. Nature 423: 139-144.
    • (2003) Nature , vol.423 , pp. 139-144
    • Lenski, R.E.1    Ofria, C.2    Pennock, R.T.3    Adami, C.4
  • 43
    • 21044440015 scopus 로고    scopus 로고
    • The coupon collector and the zuppressor mutation: Estimating the number of compensatory mutations by maximum likelihood
    • Poon A, Davis BH, Chao L (2005) The coupon collector and the zuppressor mutation: Estimating the number of compensatory mutations by maximum likelihood. Genetics 170: 1323-1332.
    • (2005) Genetics , vol.170 , pp. 1323-1332
    • Poon, A.1    Davis, B.H.2    Chao, L.3
  • 44
    • 3142755598 scopus 로고    scopus 로고
    • Epistasis and its relationship to canalization in the RNA virus 6
    • Burch CL, Chao L (2004) Epistasis and its relationship to canalization in the RNA virus 6. Genetics 167: 559-567.
    • (2004) Genetics , vol.167 , pp. 559-567
    • Burch, C.L.1    Chao, L.2
  • 45
    • 13144257707 scopus 로고    scopus 로고
    • The genetic theory of adaptation: A brief history
    • Orr HA (2005) The genetic theory of adaptation: A brief history. Nat Rev Gen 6: 119-127.
    • (2005) Nat Rev Gen , vol.6 , pp. 119-127
    • Orr, H.A.1


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