Mapping multiple disease resistance genes using a barley mapping population evaluated in Peru, Mexico, and the USA

Molecular Breeding

Volumn 18, Issue 4, 2006, Pages 355-366

  Rossi, C ^a,b   Cuesta Marcos, A ^c   Vales, I ^a   Gomez Pando, L ^d   Orjeda, G ^e   Wise, R ^f   Sato, K ^g   Hori, K ^g   Capettini, F ^h   Vivar, H ^h   Chen, X ⁱ   Hayes, P ^a  

^a OREGON STATE UNIVERSITY   (United States)

^b INSTITUTO NACIONAL DE INVESTIGACIÓN AGROPECUARIA INIA   (Uruguay)

^c CSIC   (Spain)

^d UNIVERSIDAD NACIONAL AGRARIA LA MOLINA   (Peru)

^e UNIVERSIDAD PERUANA CAYETANO HEREDIA   (Peru)

^f IOWA STATE UNIVERSITY   (United States)

^g OKAYAMA UNIVERSITY   (Japan)

^h INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Mexico)

ⁱ AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

Blumeria graminis f. sp. hordei; Hordeum vulgare subsp. vulgare; Puccinia hordei; Puccinia striiformis f. sp. hordei; Qualitative resistance; Quantitative resistance

Indexed keywords

DNA SEQUENCES; FUNGI; GENES; MAPPING;

BLUMERIUM GRAMINI F.; HORDEI; HORDEUM VULGARE; HORDEUM VULGARE SUBSP.; PUCCINIA HORDEI; PUCCINIA STRIIFORMIS; PUCCINIA STRIIFORMIS F.; QUALITATIVE RESISTANCE; QUANTITATIVE RESISTANCE; SP.; VULGARE;

PATHOGENS;

BLUMERIA GRAMINIS F. SP. HORDEI; ERYSIPHALES; HORDEUM VULGARE SUBSP. VULGARE; PUCCINIA HORDEI; PUCCINIA STRIIFORMIS;

EID: 33750452358     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-006-9043-0     Document Type: Article

References (43)

1. Backes G, Madsen LH, Jaiser H, Stougaard J, Herz M, Mohler V, Jahoor A (2003) Localisation of genes for resistance against Blumeri graminis f.sp. hordei and Puccinia graminis in a cross between a barley cultivar and a wild barley (Hordeum vulgare ssp. spontaneum) line. Theor Appl Genet 106:353-362
2. Bushnell WR (2002) The role of powdery mildew research in understanding host-parasite interaction: past, present and future. In: Bélanger RR, Bushnell WR, Dik AJ, Carver TLW (eds) The powdery mildews: a comprehensive treatise. APS Press, St. Paul, MN, pp 1-12
3. Castro AJ, Hayes PM, Fillichkin T, Rossi C (2002) Update of barley stripe rust resistance in the Calicuchima-sib x Bowman mapping population. Barley Genet Newsl 32:1-12
4. Castro AJ, Capettini F, Corey AE, Fillichkin T, Hayes PM, Kleinhofs A, Kudrna D, Richardson K, Sandoval-Islas S, Rossi C, Vivar H (2003a) Mapping and pyramiding of qualitative and quantitative resistance to stripe rust in barley. Theor Appl Genet 107:922-930
5. Castro AJ, Chen XM, Hayes PM, Johnston M (2003b) Pyramiding quantitative trait locus (QTL) alleles determining resistance to barley stripe rust: effects on resistance at seedling stage. Crop Sci 43:651-659
6. Chelkowski J, Tyraka M, Sobkiewicz A (2003) Resistance genes in barley (Horedum vulgare) and their identification with molecular markers. J App Genet 44:291-309
7. Chen F, Prehn D, Hayes PM, Mulrooney D, Corey A, Vivar H (1994) Mapping genes for resistance to barley stripe rust (Puccinia striiformis f. sp. hordei). Theor Appl Genet 88:215-219
8. Collinge DB, Gregersen PL, Thordal-Christensen H (2002) The nature and role of defense response genes in cereals. In: Bélanger RR, Bushnell WR, Dik AJ, Carver TLW (eds) The powdery mildews: a comprehensive treatise. APS Press, St. Paul, MN, pp 146-160
9. Dreiseitl A (2003) Adapation of Blumeria graminis f.sp. hordei to barley resistance genes in the Czech Republic in 1971-2000. Plant Soil Environ 49:241-248
10. Feurestein U, Brown AHD, Burdon JJ (1990) Linkage of rust resistance genes from wild Barley (Hordeum spontaneum) with isozyme markers. Plant Breed 104:318-324
11. Giese H, Jørgensen JH, Jensen HP, Jensen J (1981) Linkage relationships of ten powdery mildew resistance genes on barley chromosome 5. Hereditas 95:43-50
12. Hayes P, Prehn D, Vivar H, Blake T, Comeau A, Henry I, Johnston M, Jones B, Steffenson B, St. Pierre CA, Chen F (1996) Multiple disease resistance loci and their relationship to agronomic and quality loci in a spring barley population. http://probe.nalusda.gov:8000/otherdocs/jqtl/jqtl1996-02/jqtl22.html
13. Hayes PM, Castro A, Marquez-Cedillo L, Corey A, Henson C, Jones BL, Kling J, Mather D, Matus I, Rossi C, Sato K (2003) Genetic diversity for quantitative inherited agronomic and malting quality traits. In: von Bothmer R et al (eds) Diversity in barley (Hordeum vulgare). Elsevier Science Publishers, Amsterdam
14. Hittalmani S, Parco A, Mew TV, Zeigler RS, Huang N (2000) Fine mapping and DNA marker-assisted pyramiding of the three major genes for blast resistance in rice. Theor Appl Genet 100:1121-1128
15. Hovmøller MS, Caffier V, Jalli M, Andersen O, Besenhofer G, Czembor JH, Dreiseitl A, Felsenstein F, Fleck A, Heinrics F, Jonsson R, Limpert E, Mercer P, Plesnik S, Rashal I, Skinnes H, Slater S, Vronska O (2000) The European barley powdery mildew virulence survey and disease nursery 1993-1999. Agronomie 20:729-743
16. Ji Y, Steffenson BJ, Fetch TG, Jr (1994) Sources of resistance to pathotype QCC of Puccinia graminis f. sp. tritici in barley. Crop Sci 34:285-288
17. Kleinhofs A, Kilian A, Saghai Maroof MA, Biyashev RM, Hayes P, Chen FQ, Lapitan N, Fenwich A, Blake TK, Kanazin V, Ananiev E, Dahleen L, Kudrna D, Bollinger J, Knapp SJ, Liu B, Sorrells M, Heun M, Franckowiak JD, Hoffman D, Skadsen R, Steffenson BJ (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome. Theor Appl Genet 86:705-712
18. Kosambi DD (1944) The estimation of map distance from recombination values. Ann Eugen 12:172-175
19. Li ZK, Luo LJ, Mei HW, Paterson AH, Zhao XH, Zhong DB, Wang YP, Yu XQ, Zhu L, Tabien R, Stansel JW, Ying CS (1999) A defeated rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. oryzae. Mol Gen Genet 261:58-63
20. Lindhout P (2002) The perspectives of polygenic resistance in breeding for durable disease resistance. Euphytica 124:217-226
21. Moseman JG (1972) Isogenic barley lines for reaction to Erysiphe graminis f. sp. hordei. Crop Sci 12:681-682
22. Narayanan NN, Baisakh N, Oliva NP, Vera Cruz CM, Gnanamanickam SS, Datta K, Datta SK (2004) Molecular breeding: marker assisted selection combined with biolistic transformation for blast and bacterial blight resistance in Indica rice (cv. CO39). Mol Breed 14:61-71
23. Park RF, Karakousis A (2002) Characterization and mapping of gene Rph19 conferring resistance to Puccinia hordei in the cultivar Reka 1 and several Australian barleys. Plant Breed 121:232-236
24. Qi X, Nicks EE, Stam P, Lindhourt P (1998) Identification of QTLs for partial resistance to leaf rust (Puccinia hordei) in barley. Theor Appl Genet 96:1205-1215
25. Qi X, Jiang G, Chen W, Nicks RE, Stam P, Lindhourt P (1999) Isolate-specific QTLs for partial resistance to Puccinia hordei in barley. Theor Appl Genet 99:877-884
26. Sato K, Nankaku N, Motoi Y, Takeda K (2004) Large scale mapping of ESTs on barley genome. In: Spunar J, Janikova J (eds) Proceedings of the 9th International Barley Genetics Symposium, vol 1. Brno, Czech Republic, pp 79-85
27. Schonfeld M, Ragni A, Fischbeck G, Jahoor A (1996) RFLP mapping of three new loci for resistance genes to powdery mildew (Erysiphe graminis f. sp. hordei) in barley. Theor Appl Genet 93:48-56
28. Thiel T, Michalek W, Varshney RK, Graner A (2003) Exploiting EST database for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.). Theor Appl Genet 106:411-422
29. Toojinda T, Baird E, Booth A, Broers L, Hayes P, Powell W, Thomas W, Vivar H, Young G (1998) Introgression of quantitative trait loci (QTLs) determining stripe rust resistance in barley: an example of marker-assisted line development. Theor Appl Genet 96:123-131
30. Toojinda T, Baird E, Broers L, Chen XM, Hayes PM, Kleinhofs A, Korte J, Kudrna D, Leung H, Line RF, Powell W, Vivar H (2000) Mapping quantitative and qualitative disease resistance genes in a doubled haploid population of barley. Theor Appl Genet 101:580-589
31. Torp J, Jensen HP, Jørgensen JH (1978) Powdery mildew resistance genes in 106 Northwest European spring barley varieties. Royal Veterinary and Agricultural University Yearbook, Copenhagen, pp 75-102
32. Vales MI, Schön CC, Capettini F, Chen XM, Corey AE, Mather DE, Mundt CC, Richardson KL, Sandoval-Islas JS, Utz HF, Hayes PM (2005) Effect of population size on the estimation of QTL: a test using resistance to barley stripe rust. Theor Appl Genet 111:1260-1270
33. Vanderplank JE (1963) Plant diseases: epidemics and control. Academic Press, New York London, pp 349
34. Vanderplank JE (1968) Disease resistance in plants. Academic Press, New York London, pp 206
35. van Ooijen JW, Voorrips RE (2001) JoinMap 3.0 software for the calculation of genetic linkage maps. Biometris, Wageningen University, Plant Res. Int., The Netherlands
36. Wang S, Basten CJ, Zeng Z-B (2005) Windows QTL cartographer 2.5. Department of Statistics, North Carolina State University, Raleigh, NC (http://statgen.ncsu.edu/qtlcart/WQTLCart.htm)
37. Walker DR, Narvel JM, Boerma HR, All JN, Parrott WA (2004) A QTL that enhance and broadens Bt insect resistance in soybean. Theor Appl Genet 109:1051-1057
38. Wei F, Gobelman-Werner K, Morroll S, Long J, Mao L, Wing R, Leister D, Schulze-Lefert P, Wise R (1999) The Mla (powdery mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley. Genetics 153:1929-1948
39. Williams KJ (2003) The molecular genetics of disease resistance in barley. Aust J Agric Res 54:1065-1079
40. Wisser RJ, Sun Q, Hulbert SH, Kresovich S, Nelson RJ (2005) Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance. Genome 169:2277-2293
41. Yan L, Echenique V, Busso C, SanMiguel P, Ramakrishna W, Bennetzen JL, Harrington S, Dubcovsky J (2002) Cereal genes similar to Snf2 define a new subfamily that includes human and mouse genes. Mol Gen Genet 268:488-499
42. Yi G, Lee SK, Hong YK, Cho YC, Nam MH, Kim SC, Han SS, Wang GL, Hahn TR, Ronald PC, Jeon JS (2004) Use of Pi5(t) markers in marker-assisted selection to screen for cultivars with resistance to Magnaporthe grisea. Theor Appl Genet 109:978-985
43. Zeng ZB (1994) Precision mapping of quantitative trait loci. Genetics 136:1457-1468