An in vitro screening assay to discover novel inhibitors of 4-coumarate:CoA ligase

Pest Management Science

Volumn 62, Issue 11, 2006, Pages 1065-1071

  Yun, Min Soo ^a,c   Chen, Weijun ^a,d   Deng, Fan ^a,e   Kiyokawa, Takahiro ^b   Mametsuka, Koki ^b   Yogo, Yasuhiro ^a,f  

^a NATIONAL AGRICULTURAL RESEARCH CENTER   (Japan)

^b NIHON NOHYAKU CO LTD   (Japan)

^c NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

^d UNIVERSITY OF MASSACHUSETTS MEDICAL SCHOOL   (United States)

^e DONALD DANFORTH PLANT SCIENCE CENTER   (United States)

^f NATIONAL INSTITUTE FOR AGRO ENVIRONMENTAL SCIENCES   (Japan)

Author keywords

4 coumarate:CoA ligase; High throughput screening; Plant growth inhibitors; Propanil; Swep

Indexed keywords

4 COUMARATE COA LIGASE; 4-COUMARATE-COA LIGASE; HERBICIDE; LONG CHAIN FATTY ACID COENZYME A LIGASE; RECOMBINANT PROTEIN;

BACTERIUM; ENZYME ACTIVITY; FILTRATION; GENE EXPRESSION; GROWTH RATE; INHIBITOR; ION EXCHANGE; PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; DRUG ANTAGONISM; ENZYMOLOGY; ESCHERICHIA COLI; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; TOBACCO;

AMINO ACID SEQUENCE; COENZYME A LIGASES; ESCHERICHIA COLI; HERBICIDES; MOLECULAR SEQUENCE DATA; RECOMBINANT PROTEINS; TOBACCO;

ESCHERICHIA COLI; NICOTIANA TABACUM;

EID: 33750356587     PISSN: 1526498X     EISSN: 15264998     Source Type: Journal    
DOI: 10.1002/ps.1277     Document Type: Article

References (29)

1. Ott K-H, Aranibar N, Singh B and Stockton GW, Metabolomics classifies pathways affected by bioactive compounds. Artificial neural network classification of NMR spectra of plant extracts. Phytochemistry 62:971-985 (2003).
2. Ridley SM, Elliott AC, Yeung M and Youle D, High throughput screening as a tool for agrochemical discovery: automated synthesis, compound input, assay design and process management. Pestic Sci 54:327-337 (1998).
3. Hahlbrock K and Scheel D, Physiology and molecular biology of phenylpropanoid metabolism. Annu Rev Plant Physiol Plant Mol Biol 40:347-369 (1989).
4. Peterson M, Strack D and Matern U, Biosynthesis of phenylpropanoids and related compounds, in Biochemistry of Plant Secondary Metabolism, ed. by Wink M. Sheffield Academic Press, Sheffield, UK, pp. 151-221 (1999).
5. Whetten R, MacKay JJ and Sederoff RR, Recent advances in understanding lignin biosynthesis. Annu Rev Plant Physiol Plant Mol Biol 49:585-609 (1998).
6. Dixon RA and Paiva NL, Stress-induced phenylpropanoid metabolism. Plant Cell 7:1087-1097 (1995).
7. Voo KS, Whetten RW, O'Malley DM and Sederoff RR, 4-Coumarate:coenzyme A ligase from loblolly pine xylem. Plant Physiol 108:85-97 (1995).
8. Deng F, Aoki M and Yogo Y, Effect of naringenin on the growth and lignin biosynthesis of gramineous plants. Weed Biol Manag 4:49-55 (2004).
9. Chen W, Yun M-S and Yogo Y, The sensitivity of annual plants to naringenin and chalcone. Weed Biol Manag 4:235-238 (2004).
10. Yun M-S, Chen W, Deng F and Yogo Y, Differential properties of 4-coumarate:CoA ligase related to growth suppression by chalcone in maize and rice. Plant Growth Reg 46:169-176 (2005).
11. Zhao Y, Kung SD and Dube SK, Nucleotide sequence of rice 4-coumarate:CoA ligase gene, 4-CL1. Nucleic Acids Res 18:6144 (1990).
12. Uhlmann A and Ebel J, Molecular cloning and expression of 4-coumarate:coenzyme A ligase, an enzyme involved in the resistance of soybean (Glycine max L.) against pathogen attack. Plant Physiol 102:1147-1156 (1993).
13. Kajita S, Katayama Y and Omori S, Alterations in the biosynthesis of lignin in transgenic plants with chimeric genes for 4-coumarate:coenzyme A ligase. Plant Cell and Physiology 37:957-965 (1996).
14. Lee D and Douglas CJ, Two divergent members of a tobacco 4-coumarate:coenzyme A ligase (4CL) gene family. cDNA structure, gene inheritance and expression, and properties of recombinant proteins. Plant Physiology 112:193-205 (1996).
15. Lee D, Ellard M, Wanner LA, Davis KR and Douglas CJ, The Arabidopsis thaliana 4-coumarate:CoA ligase (4CL) gene: stress and developmentally regulated expression and nucleotide sequence of its cDNA. Plant Mol Biol 28:871-884 (1995).
16. Lee D, Meyer K, Chapple C and Douglas CJ, Antisense suppression of 4-coumarate:coenzyme A ligase activity in Arabidopsis leads to altered lignin subunit composition. Plant Cell 9:1985-1998 (1997).
17. Ehlting J, Buttner D, Wang Q, Douglas CJ, Somssich IE and Kombrink E, Three 4-coumarate:coenzyme A ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms. Plant J 19:9-20 (1999).
18. Cukovic D, Ehlting J, VanZiffle JA and Douglas CJ, Structure and evolution of 4-coumarate:coenzyme A ligase (4CL) gene families. Biol Chem 382:645-654 (2001).
19. Costa MA, Bedgar DL, Moinuddin SGA, Kim K-W, Cardenas CL, Cochrane FC, et al, Characterization in vitro and in vivo of the putative multigene 4-coumarate:CoA ligase network in Arabidopsis:syringyl lignin and sinapate/sinapyl alcohol derivative formation. Phytochemistry 66:2072-2091 (2005).
20. Lein W, Bornke F, Reindl A, Ehrhardt T, Stitt M and Sonnewald U, Target-based discovery of novel herbicides. Curr Opin Plant Biol 7:219-225 (2004).
21. Ogawa H, Yamada I, Arai K, Hirase K, Moriyasu K, Schneider C, et al., Mode of bleaching phytotoxicity of herbicidal diphenylpyrrolidinones. Pest Manag Sci 57:33-40 (2001).
22. Bradford MM, A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding. Anal Biochem 72:248-254 (1976).
23. Hu W-J, Kawaoka A, Tsai C-J, Lung J, Osakabe K, Ebinuma H, et al, Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides). Proc Nat Acad Sci USA 95:5407-5412 (1998).
24. Knobloch K-H and Hahlbrock K, Isoenzymes of p-coumarate:CoA ligase from cell suspension cultures of Glycine max (soybean). Eur J Biochem 52:311-320 (1975).
25. Grand C, Boudet A and Boudet AM, Isoenzymes of hydroxycinnamate:CoA ligase from poplar stems properties and tissue distribution. Planta 158:225-229 (1983).
26. Ranjeva R, Boudet AM and Faggion R, Phenolic metabolism in petunia tissues: properties of p-coumarate:coenzyme A ligase isoenzymes. Biochimie 58:1255-1262 (1976).
27. Gruenhagen RD and Moreland DE, Effect of herbicides on ATP levels in excised soybean hypocotyls. Weed Sci 19:319-323 (1971).
28. Hofstra G and Switzer CM, The phytotoxicity of propanil. Weed Sci 16:23-28 (1962).
29. Mann JD, Jordan LS and Day BE, A survey of herbicide for their effect upon protein synthesis. Plant Physiol 40:80-843 (1965).