Recognition of base pair inversions in duplex by chimeric (α,β) triplex-forming oligonucleotides

Journal of Biomolecular Structure and Dynamics

Volumn 24, Issue 2, 2006, Pages 183-188

  Timofeev, Edward N ^a   Goryaeva, Baira V ^a   Florentiev, Vladimir L ^a  

^a ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

Author keywords

Chimeric alpha beta oligonucleotides; Triplex DNA

Indexed keywords

ADENINE; ALPHA,BETA OLIGONUCLEOTIDE; CYTOSINE; DNA; DOUBLE STRANDED DNA; GUANINE; OLIGONUCLEOTIDE; PURINE; PYRIMIDINE; THYMIDINE; THYMINE; TRIPLEX DNA; UNCLASSIFIED DRUG;

ARTICLE; BASE PAIRING; CHIMERA; DNA MODIFICATION; GEL ELECTROPHORESIS; LOW TEMPERATURE; MOLECULAR RECOGNITION; NUCLEOTIDE BINDING SITE; NUCLEOTIDE SEQUENCE; PH; PRIORITY JOURNAL; THERMOSTABILITY;

EID: 33750033011     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2006.10507111     Document Type: Article

References (19)

1. Buchini, S., and Leumann, C. J., 2003. Curr. Opin. Chem. Biol., 7:717–726.
2. Fox, K. R., 2000. Curr. Med. Chem., 7:17–37.
3. Rogers, F. A., Lloyd, J. A., and Glazer, P. M., 2005. Curr. Med. Chem. Anticancer Agents, 5:319–326.
4. Besch, R., Giovannangeli, C., and Degitz, K., 2004. Curr. Drug Targets, 5:691–703.
5. Liquier, J., Geinguenaud, F., Huynh-Dinh, T., Gouyette, C., Khomyakova, E., and Taillandier, E., 2001. J. Biomol. Struct. Dyn., 19:527–534.
6. Beal, P. A., and Dervan, P. B., 1992. Nucleic Acids Res., 20:2773–2776.
7. Huang, C.-Y., and Miller, P. S., 1993. J. Am. Chem. Soc., 115:10456–10457.
8. Orson, F. M., Klysik, J., Bergstrom, D. E., Ward, B., Glass, G. A., Hua, P., and Kinsey, B. M., 1999. Nucleic Acids Res., 27:810–816.
9. Rusling, D. A., Powers, V. E., Ranasinghe, R. T., Wang, Y., Osborne, S. D., Brown, T., and Fox, K. R., 2005. Nucleic Acids Res., 33:3025–3032.
10. Buchini, S., and Leumann, C. J., 2004. Angew. Chem. Int. Ed. Engl., 43:3925–3928.
11. Doronina, S. O., and Behr, J.-P., 1997. Chem. Soc. Reviews, 26:63–71.
12. Doronina, S. O., and Behr, J.-P., 1998. Tetrahedron Lett., 39:547–550.
13. Parel, S. P., and Leumann, C. J., 2001. Nucleic Acids Res., 29:2260–2267.
14. Timofeev, E. N., Borisova, O. F., and Shchyolkina, A. K., 2000. J. Biomol. Struct. Dyn., 17:655–664.
15. Timofeev, E. N., Kochetkova, S. V., and Florentiev, V. L., 2004. Molecular Biol. (Russian)., 38:547–52.
16. Sato, Y., Tateno, G., Seio, K., and Sekine, M., 2002. Tetrahedron Lett., 43:3251–3254.
17. Rippe, K., Fritsch, V., Westhof, E., and Jovin, T. M., 1992. EMBO J., 11:3777–3786.
18. Zafrul Azam, A. T., Hasegawa, M., Moriguchi, T., and Shinozuka, K., 2004. Bioorg. Med. Chem. Lett., 14:5747–5750.
19. Noonberg, S. B., Francois, J. C., Praseuth, D., Guieysse-Peugeot, A. L., Lacoste, J., Garestier, T., and Helene, C., 1995. Nucleic Acids Res., 23:4042–4049.