Phylogenetic analysis of the evolution of the niche in lizards of the Anolis sagrei group

Ecology

Volumn 87, Issue 7 SUPPL., 2006, Pages

  Knouft, Jason H ^a   Losos, Jonathan B ^b   Glor, Richard E ^c   Kolbe, Jason J ^b  

^a UNIVERSITY OF COLORADO   (United States)

^b WASHINGTON UNIVERSITY   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Anole; Anolis; Cuba; Ecological niche modeling; Fundamental niche; Niche conservatism; Niche evolution; Phylogenetics

Indexed keywords

COMPARATIVE STUDY; EVOLUTIONARY THEORY; GIS; LIZARD; MITOCHONDRIAL DNA; MULTIVARIATE ANALYSIS; NICHE PARTITIONING; PHYLOGENETICS;

ATLANTIC ISLANDS; ATLANTIC OCEAN; CARIBBEAN ISLANDS; CUBA; GREATER ANTILLES;

ANOLIS; ANOLIS SAGREI; SQUAMATA;

EID: 33749825179     PISSN: 00129658     EISSN: 00129658     Source Type: Journal    
DOI: 10.1890/0012-9658(2006)87[29:paoteo]2.0.co;2     Document Type: Article

References (46)

1. Anderson, R. P., D. Lew, and A. T. Peterson. 2003. Evaluating predictive models of species' distributions: criteria for selecting optimal models. Ecological Modelling 162:211-232.
2. Chase, J. M., and M. A. Leibold. 2003. Ecological niches: linking classical and contemporary approaches. The University of Chicago Press, Chicago, Illinois, USA.
3. Felsenstein, J. 1985. Phylogenies and the comparative method. American Naturalist 125:1-15.
4. Glor, R. E. 2004. Species diversification in an adaptive radiation: a comparative analysis of Anolis lizards. Dissertation. Washington University, St. Louis, Missouri, USA.
5. Graham, C. H., S. R. Ron, J. C. Santos, C. J. Schneider, and C. Moritz. 2004. Integrating phylogenetics and environmental niche models to explore speciation mechanisms in dendrobatid frogs. Evolution 58:1781-1793.
6. Guisan, A., and N. E. Zimmermann. 2000. Predictive habitat distribution models in ecology. Ecological Modelling 135:147-186.
7. Harvey, P. H., and M. D. Pagel. 1991. The comparative method in evolutionary biology. Oxford University Press, Oxford, UK.
8. Hijmans, R. J., L. Guarino, M. Cruz, and E. Rojas. 2001. Computer tools for spatial analysis of plant genetic resources data: 1. DIVA-GIS. Plant Genetic Resources Newsletter 127:15-19.
9. Huelsenbeck, J. P., and F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754-755.
10. Hutchinson, G. E. 1957. Concluding remarks. Cold Spring Harbor Symposia on Quantitative Biology 22:415-442.
11. Illoldi-Rangel, P., V. Sanchez-Cordero, and A. T. Peterson. 2004. Predicting distributions of Mexican mammals using ecological niche modeling. Journal of Mammalogy 85:658-662.
12. Lord, J., M. Westoby, and M. Leishman. 1995. Seed size and phylogeny in six temperate floras: constraints, niche conservatism, and adaptation. American Naturalist 146:349-364.
13. Losos, J. B. 1994. Integrative approaches to evolutionary ecology: Anolis lizards as model systems. Annual Review of Ecology and Systematics 25:467-493.
14. Losos, J. B. 1999. Uncertainty in the reconstruction of ancestral character states and limitations on the use of phylogenetic comparative methods. Animal Behaviour 58:1319-1324.
15. Losos, J. B., M. Leal, R. E. Glor, K. de Queiroz, P. E. Hertz, L. Rodriguez Schettíno, A. Chamizo Lara, T. R. Jackman, and A. Larson. 2003. Niche lability in the evolution of a Caribbean lizard community. Nature 424:542-545.
16. MacArthur, R. H. 1972. Geographical ecology. Harper and Row, New York, New York, USA.
17. Martins, E. P. 1999. Estimation of ancestral states of continuous characters: a computer simulation study. Systematic Biology 48:642-650.
18. Nicholson, K. E., R. E. Glor, J. J. Kolbe, A. Larson, S. B. Hedges, and J. B. Losos. 2005. Mainland colonization by island lizards. Journal of Biogeography 32:929-938.
19. Oakely, T. H., and C. W. Cunningham. 2000. Independent contrasts succeed where ancestor reconstruction fails in a known bacteriophage phylogeny. Evolution 54:397-405.
20. Oberhauser, K., and A. T. Peterson. 2003. Modeling current and future potential wintering distributions of eastern North American monarch butterflies. Proceedings of the National Academy of Sciences (USA) 100:14063-14068.
21. Peterson, A. T. 2001. Predicting species' geographic distributions based on ecological niche modeling. Condor 103:599-605.
22. Peterson, A. T. 2003. Predicting the geography of species' invasion via ecological niche modeling. Quarterly Review of Biology 78:419-433.
23. Peterson, A. T., and R. D. Holt. 2003. Niche differentiation in Mexican birds: using point occurrences to detect ecological innovation. Ecology Letters 6:774-782.
24. Peterson, A. T., E. Martinez-Meyer, C. Gonzalez-Salazar, and P.W. Hall. 2004. Modeled climate change effects on distributions of Canadian butterfly species. Canadian Journal of Zoology 82:851-858.
25. Peterson, A. T., and C. R. Robins. 2003. Using ecological-niche modeling to predict barred owl invasions with implication for spotted owl conservation. Conservation Biology 17:1161-1165.
26. Peterson, A. T., J. Soberón, and V. Sanchez-Cordero. 1999. Conservatism of ecological niches in evolutionary time. Science 285:1265-1267.
27. Peterson, A. T., and D. A. Vieglais. 2001. Predicting species invasions using ecological niche modeling: new approaches from bioinformatics attack a pressing problem. Bioscience 51:363-371.
28. Poe, S. 2004. Phylogeny of anoles. Herpetological Monographs 18:37-89.
29. Rice, N. H., E. Martinez-Meyer, and A. T. Peterson. 2003. Ecological niche differentiation in the Aphelocoma jays: a phylogenetic perspective. Biological Journal of the Linnean Society 80:369-383.
30. Rodríguez-Schettino, L. 1999. The iguanid lizards of Cuba. University of Florida Press, Gainesville, Florida, USA.
31. Roughgarden, J. 1995. Anolis lizards of the Caribbean: ecology, evolution, and plate tectonics. Oxford University Press, New York, New York.
32. Ruibal, R. 1961. Thermal relations of five species of tropical lizards. Evolution 15:98-111.
33. Ruibal, R., and E. E. Williams. 1961. The taxonomy of the Anolis homolechis complex of Cuba. Bulletin of the Museum of Comparative Zoology 125:211-246.
34. Sanderson, M. J. 2002. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Molecular Biology and Evolution 19:101-109.
35. Sanderson, M. J. 2003. r8s: Inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock. Bioinformatics 19:301-302.
36. Schluter, D., T. Price, A. O. Mooers, and D. Ludwig. 1997. Likelihood of ancestor states in adaptive radiation. Evolution 51:1699-1711.
37. Schoener, T. W. 1968. The Anolis lizards of Bimini: resource partitioning in a complex fauna. Ecology 49:704-726.
38. Schwartz, A., and R. W. Henderson. 1991. Amphibians and reptiles of the West Indies: descriptions, distributions, and natural history. University of Florida Press, Gainesville, Florida, USA.
39. Soberón, J., and A. T. Peterson. 2005. Interpretation of models of fundamental ecological niches and species' distributional areas. Biodiversity Informatics 2:1-10.
40. Stockwell, D. R. B. 2006. Improving ecological niche models by data mining large environmental datasets for surrogate models. Ecological Modelling 192:188-196.
41. Stockwell, D. R. B., and D. Peters. 1999. The GARP modeling system: problems and solutions to automated spatial prediction. International Journal of Geographical Information Science 13:143-158.
42. Swofford, D. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods). Sinauer, Sunderland, Massachusetts, USA.
43. Webb, C. O., D. D. Ackerly, M. A. McPeek, and M. J. Donoghue. 2002. Phylogenies and community ecology. Annual Review of Ecology and Systematics 33:475-505.
44. Webster, A. J., and A. Purvis. 2002. Testing the accuracy of methods for reconstructing ancestral states of continuous characters. Proceedings of the Royal Society of London B 269:143-149.
45. Westoby, M., M. Leishman, and J. Lord. 1995. On misinterpreting the phylogenetic correction. Journal of Ecology 83:531-534.
46. Williams, E. E. 1983. Ecomorphs, faunas, island size, and diverse end points in island radiations of Anolis. Pages 326-370 in R. B. Huey, E. R. Pianka, and T. W. Schoener, editors. Lizard ecology: studies of a model organism. Harvard University Press, Cambridge, Massachusetts, USA.