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Volumn 124, Issue 3, 2006, Pages

Is Poisson-Boltzmann theory insufficient for protein folding simulations?

Author keywords

[No Author keywords available]

Indexed keywords

BETA-HAIRPIN FOLDING SIMULATION; BIOLOGICAL MACROMOLECULES; BORN APPROXIMATION; POISSON-BOLTZMANN THEORY;

EID: 33749605193     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.2161202     Document Type: Article
Times cited : (47)

References (36)
  • 2
    • 1842298212 scopus 로고    scopus 로고
    • J. D. Bryngelson, J. N. Onuchic, N. D. Socci, and P. G. Wolynes, Proteins: Struct., Funct., Genet. 0087-3585 21, 167 (1995); K. A. Dill and H. S. Chan, Nat. Struct. Biol. 4, 10 (1997).
    • (1997) Nat. Struct. Biol. , vol.4 , pp. 10
    • Dill, K.A.1    Chan, H.S.2
  • 8
    • 0023779259 scopus 로고
    • 0087-3585
    • M. K. Gilson and B. Honig, Proteins: Struct., Funct., Genet. 0087-3585 4, 7 (1988); M. E. Davis and J. A. McCammon, Chem. Rev. (Washington, D.C.) 0009-2665 90, 509 (1990); K. A. Sharp and B. Honig, Annu. Rev. Biophys. Biophys. Chem. 0883-9182 10.1146/annurev.bb.19.060190.001505 19, 301 (1990); B. Honig and A. Nicholls, Science 268, 1144 (1995).
    • (1988) Proteins: Struct., Funct., Genet. , vol.4 , pp. 7
    • Gilson, M.K.1    Honig, B.2
  • 9
    • 4243463817 scopus 로고
    • 0009-2665
    • M. K. Gilson and B. Honig, Proteins: Struct., Funct., Genet. 0087-3585 4, 7 (1988); M. E. Davis and J. A. McCammon, Chem. Rev. (Washington, D.C.) 0009-2665 90, 509 (1990); K. A. Sharp and B. Honig, Annu. Rev. Biophys. Biophys. Chem. 0883-9182 10.1146/annurev.bb.19.060190.001505 19, 301 (1990); B. Honig and A. Nicholls, Science 268, 1144 (1995).
    • (1990) Chem. Rev. (Washington, D.C.) , vol.90 , pp. 509
    • Davis, M.E.1    McCammon, J.A.2
  • 10
    • 0025283002 scopus 로고
    • 0883-9182 10.1146/annurev.bb.19.060190.001505
    • M. K. Gilson and B. Honig, Proteins: Struct., Funct., Genet. 0087-3585 4, 7 (1988); M. E. Davis and J. A. McCammon, Chem. Rev. (Washington, D.C.) 0009-2665 90, 509 (1990); K. A. Sharp and B. Honig, Annu. Rev. Biophys. Biophys. Chem. 0883-9182 10.1146/annurev.bb.19.060190.001505 19, 301 (1990); B. Honig and A. Nicholls, Science 268, 1144 (1995).
    • (1990) Annu. Rev. Biophys. Biophys. Chem. , vol.19 , pp. 301
    • Sharp, K.A.1    Honig, B.2
  • 11
    • 0029016182 scopus 로고
    • M. K. Gilson and B. Honig, Proteins: Struct., Funct., Genet. 0087-3585 4, 7 (1988); M. E. Davis and J. A. McCammon, Chem. Rev. (Washington, D.C.) 0009-2665 90, 509 (1990); K. A. Sharp and B. Honig, Annu. Rev. Biophys. Biophys. Chem. 0883-9182 10.1146/annurev.bb.19.060190.001505 19, 301 (1990); B. Honig and A. Nicholls, Science 268, 1144 (1995).
    • (1995) Science , vol.268 , pp. 1144
    • Honig, B.1    Nicholls, A.2
  • 12
    • 0036771626 scopus 로고    scopus 로고
    • 0192-8651 10.1002/jcc.10120
    • R. Luo, L. David, and M. K. Gilson, J. Comput. Chem. 0192-8651 10.1002/jcc.10120 23, 1244 (2002); Q. Lu and R. Luo, J. Chem. Phys. 119, 11035 (2003).
    • (2002) J. Comput. Chem. , vol.23 , pp. 1244
    • Luo, R.1    David, L.2    Gilson, M.K.3
  • 13
    • 0347410858 scopus 로고    scopus 로고
    • R. Luo, L. David, and M. K. Gilson, J. Comput. Chem. 0192-8651 10.1002/jcc.10120 23, 1244 (2002); Q. Lu and R. Luo, J. Chem. Phys. 119, 11035 (2003).
    • (2003) J. Chem. Phys. , vol.119 , pp. 11035
    • Lu, Q.1    Luo, R.2
  • 18
    • 31144476571 scopus 로고    scopus 로고
    • J. W. Ponder, TINKER, Washington University School of Medicine, Saint Louis, MO, 2004.
    • (2004)
    • Ponder, J.W.1
  • 23
    • 35949020425 scopus 로고
    • 0031-9007 10.1103/PhysRevLett.57.2607
    • R. H. Swendsen and J. S. Wang, Phys. Rev. Lett. 0031-9007 10.1103/PhysRevLett.57.2607 57, 2607 (1986); Y. Sugita and Y. Okamoto, Chem. Phys. Lett. 314, 141 (1999).
    • (1986) Phys. Rev. Lett. , vol.57 , pp. 2607
    • Swendsen, R.H.1    Wang, J.S.2
  • 24
    • 0001616080 scopus 로고    scopus 로고
    • R. H. Swendsen and J. S. Wang, Phys. Rev. Lett. 0031-9007 10.1103/PhysRevLett.57.2607 57, 2607 (1986); Y. Sugita and Y. Okamoto, Chem. Phys. Lett. 314, 141 (1999).
    • (1999) Chem. Phys. Lett. , vol.314 , pp. 141
    • Sugita, Y.1    Okamoto, Y.2
  • 29
    • 0032968444 scopus 로고    scopus 로고
    • 0301-4622
    • M. Nina, W. Im, and B. Roux, Biophys. Chem. 0301-4622 78, 89 (1999); E. Gallicchio and R. M. Levy, J. Comput. Chem. 0192-8651 10.1002/jcc.10400 25, 479 (2004); J. Wagoner and N. A. Baker, J. Comput. Chem. 0192-8651 10.1002/jcc. 20089 25, 1623 (2004); A. Onufriev, D. A. Case, and D. Bashford, J. Comput. Chem. 0192-8651 10.1002/jcc.10126 23, 1297 (2002); M. Feig, A. Onufriev, M. S. Lee, W. lm, D. A. Case, and C. L. Brooks, J. Comput. Chem. 25, 265 (2004).
    • (1999) Biophys. Chem. , vol.78 , pp. 89
    • Nina, M.1    Im, W.2    Roux, B.3
  • 30
    • 1442330396 scopus 로고    scopus 로고
    • 0192-8651 10.1002/jcc.10400
    • M. Nina, W. Im, and B. Roux, Biophys. Chem. 0301-4622 78, 89 (1999); E. Gallicchio and R. M. Levy, J. Comput. Chem. 0192-8651 10.1002/jcc.10400 25, 479 (2004); J. Wagoner and N. A. Baker, J. Comput. Chem. 0192-8651 10.1002/jcc. 20089 25, 1623 (2004); A. Onufriev, D. A. Case, and D. Bashford, J. Comput. Chem. 0192-8651 10.1002/jcc.10126 23, 1297 (2002); M. Feig, A. Onufriev, M. S. Lee, W. lm, D. A. Case, and C. L. Brooks, J. Comput. Chem. 25, 265 (2004).
    • (2004) J. Comput. Chem. , vol.25 , pp. 479
    • Gallicchio, E.1    Levy, R.M.2
  • 31
    • 4444323489 scopus 로고    scopus 로고
    • 0192-8651 10.1002/jcc.20089
    • M. Nina, W. Im, and B. Roux, Biophys. Chem. 0301-4622 78, 89 (1999); E. Gallicchio and R. M. Levy, J. Comput. Chem. 0192-8651 10.1002/jcc.10400 25, 479 (2004); J. Wagoner and N. A. Baker, J. Comput. Chem. 0192-8651 10.1002/jcc. 20089 25, 1623 (2004); A. Onufriev, D. A. Case, and D. Bashford, J. Comput. Chem. 0192-8651 10.1002/jcc.10126 23, 1297 (2002); M. Feig, A. Onufriev, M. S. Lee, W. lm, D. A. Case, and C. L. Brooks, J. Comput. Chem. 25, 265 (2004).
    • (2004) J. Comput. Chem. , vol.25 , pp. 1623
    • Wagoner, J.1    Baker, N.A.2
  • 32
    • 0037110472 scopus 로고    scopus 로고
    • 0192-8651 10.1002/jcc.10126
    • M. Nina, W. Im, and B. Roux, Biophys. Chem. 0301-4622 78, 89 (1999); E. Gallicchio and R. M. Levy, J. Comput. Chem. 0192-8651 10.1002/jcc.10400 25, 479 (2004); J. Wagoner and N. A. Baker, J. Comput. Chem. 0192-8651 10.1002/jcc. 20089 25, 1623 (2004); A. Onufriev, D. A. Case, and D. Bashford, J. Comput. Chem. 0192-8651 10.1002/jcc.10126 23, 1297 (2002); M. Feig, A. Onufriev, M. S. Lee, W. lm, D. A. Case, and C. L. Brooks, J. Comput. Chem. 25, 265 (2004).
    • (2002) J. Comput. Chem. , vol.23 , pp. 1297
    • Onufriev, A.1    Case, D.A.2    Bashford, D.3
  • 33
    • 0346971105 scopus 로고    scopus 로고
    • M. Nina, W. Im, and B. Roux, Biophys. Chem. 0301-4622 78, 89 (1999); E. Gallicchio and R. M. Levy, J. Comput. Chem. 0192-8651 10.1002/jcc.10400 25, 479 (2004); J. Wagoner and N. A. Baker, J. Comput. Chem. 0192-8651 10.1002/jcc. 20089 25, 1623 (2004); A. Onufriev, D. A. Case, and D. Bashford, J. Comput. Chem. 0192-8651 10.1002/jcc.10126 23, 1297 (2002); M. Feig, A. Onufriev, M. S. Lee, W. lm, D. A. Case, and C. L. Brooks, J. Comput. Chem. 25, 265 (2004).
    • (2004) J. Comput. Chem. , vol.25 , pp. 265
    • Feig, M.1    Onufriev, A.2    Lee, M.S.3    Lm, W.4    Case, D.A.5    Brooks, C.L.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.