메뉴 건너뛰기




Volumn 23, Issue 11, 2006, Pages 2203-2213

Intron length evolution in Drosophila

Author keywords

Deletion; Drosophila melanogaster; Drosophila simulans; Indel; Insertion; Intron

Indexed keywords

ARTICLE; DROSOPHILA; DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS; DROSOPHILA YAKUBA; GENE DELETION; GENE FREQUENCY; GENE INSERTION; GENE MUTATION; GENETIC POLYMORPHISM; GENETIC VARIABILITY; INTRON; MOLECULAR EVOLUTION; NONHUMAN; POPULATION GENETICS; SPECIES DIFFERENCE; X CHROMOSOME LINKAGE;

EID: 33749583346     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msl094     Document Type: Article
Times cited : (28)

References (92)
  • 1
    • 0034708480 scopus 로고    scopus 로고
    • The genome sequence of Drosophila melanogaster
    • Adams MD, Celniker SE, Holt RA, et al. (192 co-authors). 2000. The genome sequence of Drosophila melanogaster. Science 287:2185-95.
    • (2000) Science , vol.287 , pp. 2185-2195
    • Adams, M.D.1    Celniker, S.E.2    Holt, R.A.3
  • 2
    • 0028220048 scopus 로고
    • Synonymous codon usage in Drosophila melanogaster: Natural selection and translational accuracy
    • Akashi H. 1994. Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy. Genetics 136:927-35.
    • (1994) Genetics , vol.136 , pp. 927-935
    • Akashi, H.1
  • 3
    • 0028797897 scopus 로고
    • Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA
    • Akashi H. 1995. Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA. Genetics 139:1067-76.
    • (1995) Genetics , vol.139 , pp. 1067-1076
    • Akashi, H.1
  • 4
    • 0029985179 scopus 로고    scopus 로고
    • Molecular evolution between Drosophila melanogaster and D. simulans: Reduced codon bias, faster rates of amino acid substitution, and larger proteins in D. melanogaster
    • Akashi H. 1996. Molecular evolution between Drosophila melanogaster and D. simulans: reduced codon bias, faster rates of amino acid substitution, and larger proteins in D. melanogaster. Genetics 144:1297-307.
    • (1996) Genetics , vol.144 , pp. 1297-1307
    • Akashi, H.1
  • 5
    • 0032953881 scopus 로고    scopus 로고
    • Inferring the fitness effects of DNA mutations from polymorphism and divergence data: Statistical power to detect directional selection under stationarity and free recombination
    • Akashi H. 1999. Inferring the fitness effects of DNA mutations from polymorphism and divergence data: statistical power to detect directional selection under stationarity and free recombination. Genetics 151:221-38.
    • (1999) Genetics , vol.151 , pp. 221-238
    • Akashi, H.1
  • 6
    • 0037390285 scopus 로고    scopus 로고
    • Directional evolution of size coupled with ascertainment bias for variation in Drosophila microsatellites
    • Amos W, Hutter CM, Schug MD, Aquadro CF. 2003. Directional evolution of size coupled with ascertainment bias for variation in Drosophila microsatellites. Mol Biol Evol 20:660-2.
    • (2003) Mol Biol E , vol.20 , pp. 660-662
    • Amos, W.1    Hutter, C.M.2    Schug, M.D.3    Aquadro, C.F.4
  • 7
    • 0035107550 scopus 로고    scopus 로고
    • Contrasting patterns of X-linked and autosomal nucleotide variation in Drosophila melanogaster and Drosophila simulans
    • Andolfatto P. 2001. Contrasting patterns of X-linked and autosomal nucleotide variation in Drosophila melanogaster and Drosophila simulans. Mol Biol Evol 18:279-90.
    • (2001) Mol Biol Evol , vol.18 , pp. 279-290
    • Andolfatto, P.1
  • 8
    • 27144491328 scopus 로고    scopus 로고
    • Adaptive evolution of non-coding DNA in Drosophila
    • Andolfatto P. 2005. Adaptive evolution of non-coding DNA in Drosophila. Nature 437:1149-52.
    • (2005) Nature , vol.437 , pp. 1149-1152
    • Andolfatto, P.1
  • 9
    • 0034967711 scopus 로고    scopus 로고
    • Regions of lower crossing over harbor more rare variants iin African populations of Drosophila melanogaster
    • Andolfatto P, Przeworski M. 2001. Regions of lower crossing over harbor more rare variants iin African populations of Drosophila melanogaster. Genetics 158:657-65.
    • (2001) Genetics , vol.158 , pp. 657-665
    • Andolfatto, P.1    Przeworski, M.2
  • 10
    • 0345730814 scopus 로고    scopus 로고
    • Linkage disequilibrium patterns across a recombination gradient in African Drosophila melanogaster
    • Andolfatto P, Wall JD. 2003. Linkage disequilibrium patterns across a recombination gradient in African Drosophila melanogaster. Genetics 165:1289-305.
    • (2003) Genetics , vol.165 , pp. 1289-1305
    • Andolfatto, P.1    Wall, J.D.2
  • 11
    • 0024058618 scopus 로고
    • The rosy region of Drosophila melanogaster and Drosophila simulans. I. Contrasting levels of naturally occurring DNA restriction map variation and divergence
    • Aquadro CF, KM Lado, Noon WA. 1988. The rosy region of Drosophila melanogaster and Drosophila simulans. I. Contrasting levels of naturally occurring DNA restriction map variation and divergence. Genetics 119:875-88.
    • (1988) Genetics , vol.119 , pp. 875-888
    • Aquadro, C.F.1    Lado, K.M.2    Noon, W.A.3
  • 12
    • 1842470940 scopus 로고    scopus 로고
    • Mitotic and polytene chromosomes: Comparisons between Drosophila melanogaster and Drosophila simulans
    • Aulard S, Monti L, Chaminade N, Lemeunier F. 2004. Mitotic and polytene chromosomes: comparisons between Drosophila melanogaster and Drosophila simulans. Genetica 120:137-50.
    • (2004) Genetica , vol.120 , pp. 137-150
    • Aulard, S.1    Monti, L.2    Chaminade, N.3    Lemeunier, F.4
  • 13
    • 0030340053 scopus 로고    scopus 로고
    • Population genetics of silent and replacement variation in Drosophila simulans and D. melanogaster: X/autosome differences?
    • Begun DJ. 1996. Population genetics of silent and replacement variation in Drosophila simulans and D. melanogaster: X/autosome differences? Mol Biol Evol 13:1405-7.
    • (1996) Mol Biol Evol , vol.13 , pp. 1405-1407
    • Begun, D.J.1
  • 14
    • 0034883255 scopus 로고    scopus 로고
    • Analysis of conserved noncoding DNA in Drosophila reveals similar constraints in intergenic and intronic sequences
    • Bergman C, Kreitman M. 2001. Analysis of conserved noncoding DNA in Drosophila reveals similar constraints in intergenic and intronic sequences. Genome Res 11:1335-45.
    • (2001) Genome Res , vol.11 , pp. 1335-1345
    • Bergman, C.1    Kreitman, M.2
  • 15
    • 0037108764 scopus 로고    scopus 로고
    • Linkage limits the power of natural selection in Drosophila
    • Betancourt AJ, Presgraves DC. 2002. Linkage limits the power of natural selection in Drosophila. Proc Natl Acad Sci USA 99:13616-20.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 13616-13620
    • Betancourt, A.J.1    Presgraves, D.C.2
  • 16
    • 0342383237 scopus 로고
    • Effects of linkage on rates of molecular evolution
    • Birky CW, Walsh JB. 1988. Effects of linkage on rates of molecular evolution. Proc Natl Acad Sci USA 85:6414-8.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 6414-6418
    • Birky, C.W.1    Walsh, J.B.2
  • 17
    • 0036900274 scopus 로고    scopus 로고
    • Patterns of insertion and deletion in contrasting chromatin domains
    • Blumenstiel JP, Hartl DL, Lozovsky ER. 2002. Patterns of insertion and deletion in contrasting chromatin domains. Mol Biol Evol 19:2211-25.
    • (2002) Mol Biol Evol , vol.19 , pp. 2211-2225
    • Blumenstiel, J.P.1    Hartl, D.L.2    Lozovsky, E.R.3
  • 18
    • 28944438641 scopus 로고    scopus 로고
    • Differences in genome size between closely related species: The Drosophila melanogaster species subgroup
    • Boulesteix M, Weiss M, Biemont C. 2005. Differences in genome size between closely related species: the Drosophila melanogaster species subgroup. Mol Biol Evol 23:162-7.
    • (2005) Mol Biol Evol , vol.23 , pp. 162-167
    • Boulesteix, M.1    Weiss, M.2    Biemont, C.3
  • 19
    • 0346726029 scopus 로고    scopus 로고
    • Intervening sequences in paralogous genes: A comparative genomic approach to study the evolution of X chromosome introns
    • Cardazzo B, Bargelloni L, Toffolatti L, Patarnello T. 2003. Intervening sequences in paralogous genes: a comparative genomic approach to study the evolution of X chromosome introns. Mol Biol Evol 20:2034-41.
    • (2003) Mol Biol Evol , vol.20 , pp. 2034-2041
    • Cardazzo, B.1    Bargelloni, L.2    Toffolatti, L.3    Patarnello, T.4
  • 20
    • 0345035503 scopus 로고    scopus 로고
    • Intron size and natural selection
    • Carvalho AB, Clark AG. 1999. Intron size and natural selection. Nature 401:344.
    • (1999) Nature , vol.401 , pp. 344
    • Carvalho, A.B.1    Clark, A.G.2
  • 22
    • 0035038057 scopus 로고    scopus 로고
    • The effect of life-history and mode of inheritance on neutral genetic variability
    • Charlesworth B. 2001. The effect of life-history and mode of inheritance on neutral genetic variability. Genet Res 77:153-66.
    • (2001) Genet Res , vol.77 , pp. 153-166
    • Charlesworth, B.1
  • 23
    • 0023501735 scopus 로고
    • The relative rates of evolution of sex-chromosomes and autosomes
    • Charlesworth B, Coyne JA, Barton NH. 1987. The relative rates of evolution of sex-chromosomes and autosomes. Am Nat 130:113-46.
    • (1987) Am Nat , vol.130 , pp. 113-146
    • Charlesworth, B.1    Coyne, J.A.2    Barton, N.H.3
  • 24
    • 0141593581 scopus 로고    scopus 로고
    • Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene
    • Chen Y, Stephan W. 2003. Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene. Proc Natl Acad Sci USA 100:11499-504.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 11499-11504
    • Chen, Y.1    Stephan, W.2
  • 25
    • 27844577664 scopus 로고    scopus 로고
    • Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila
    • Comeron JM, Guthrie TB. 2005. Intragenic Hill-Robertson interference influences selection intensity on synonymous mutations in Drosophila. Mol Biol Evol 22:2519-30.
    • (2005) Mol Biol Evol , vol.22 , pp. 2519-2530
    • Comeron, J.M.1    Guthrie, T.B.2
  • 26
    • 0033767383 scopus 로고    scopus 로고
    • The correlation between intron length and recombination in Drosophila: A dynamic equilibrium between mutational and selective forces
    • Comeron JM, Kreitman M. 2000. The correlation between intron length and recombination in Drosophila: a dynamic equilibrium between mutational and selective forces. Genetics 156:1175-90.
    • (2000) Genetics , vol.156 , pp. 1175-1190
    • Comeron, J.M.1    Kreitman, M.2
  • 27
    • 0036263105 scopus 로고    scopus 로고
    • Population, evolutionary and genomic consequences of interference selection
    • Comeron JM, Kreitman M. 2002. Population, evolutionary and genomic consequences of interference selection. Genetics 161:389-410.
    • (2002) Genetics , vol.161 , pp. 389-410
    • Comeron, J.M.1    Kreitman, M.2
  • 28
    • 0033178886 scopus 로고    scopus 로고
    • Intron-exon structures of eukaryotic model organisms
    • Deutsch M, Long M. 1999. Intron-exon structures of eukaryotic model organisms. Nucleic Acids Res 27:3219-28.
    • (1999) Nucleic Acids Res , vol.27 , pp. 3219-3228
    • Deutsch, M.1    Long, M.2
  • 29
    • 0020172456 scopus 로고
    • Differing levels of dispersed repetitive DNA among closely related species of Drosophila
    • Dowsett AP, Young MW. 1982. Differing levels of dispersed repetitive DNA among closely related species of Drosophila. Proc Natl Acad Sci USA 79:4570-4.
    • (1982) Proc Natl Acad Sci USA , vol.79 , pp. 4570-4574
    • Dowsett, A.P.1    Young, M.W.2
  • 30
    • 0035313034 scopus 로고    scopus 로고
    • Why do genes have introns? Recombination might add a new piece to the puzzle
    • Duret L. 2001. Why do genes have introns? Recombination might add a new piece to the puzzle. Trends Genet 17:172-5.
    • (2001) Trends Genet , vol.17 , pp. 172-175
    • Duret, L.1
  • 31
    • 0016110957 scopus 로고
    • The evolutionary advantage of recombination
    • Felsenstein J. 1974. The evolutionary advantage of recombination. Genetics 78:737-56.
    • (1974) Genetics , vol.78 , pp. 737-756
    • Felsenstein, J.1
  • 32
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu Y-X, Li W-H. 1993. Statistical tests of neutrality of mutations. Genetics 133:693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.-X.1    Li, W.-H.2
  • 33
    • 33644780844 scopus 로고    scopus 로고
    • GC-biased segregation of noncoding polymorphisms in Drosophila
    • Galtier N, Bazin E, Bierne N. 2006. GC-biased segregation of noncoding polymorphisms in Drosophila. Genetics 172:221-8.
    • (2006) Genetics , vol.172 , pp. 221-228
    • Galtier, N.1    Bazin, E.2    Bierne, N.3
  • 34
    • 0347065347 scopus 로고    scopus 로고
    • Demography and natural selection have shaped genetic variation in Drosophila melanogaster: A multi-locus approach
    • Glinka S, Ometto L, Mousset S, Stephan W, De Lorenzo D. 2003. Demography and natural selection have shaped genetic variation in Drosophila melanogaster: a multi-locus approach. Genetics 165:1269-78.
    • (2003) Genetics , vol.165 , pp. 1269-1278
    • Glinka, S.1    Ometto, L.2    Mousset, S.3    Stephan, W.4    De Lorenzo, D.5
  • 35
    • 0022446440 scopus 로고
    • Sequence evolution within populations under multiple types of mutation
    • Golding B, Aquadro CF, Langley CH. 1986. Sequence evolution within populations under multiple types of mutation. Proc Natl Acad Sci USA 83:427-31.
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 427-431
    • Golding, B.1    Aquadro, C.F.2    Langley, C.H.3
  • 36
    • 0035806958 scopus 로고    scopus 로고
    • Genetic linkage and molecular evolution
    • Gordo I, Charlesworth B. 2001. Genetic linkage and molecular evolution. Curr Biol 11:R684-6.
    • (2001) Curr Biol , vol.11
    • Gordo, I.1    Charlesworth, B.2
  • 37
    • 0027500141 scopus 로고
    • Species-specific signals for the splicing of a short Drosophila intron in vitro
    • Guo M, Lo PCH, Mount SM. 1993. Species-specific signals for the splicing of a short Drosophila intron in vitro. Mol Cell Biol 13:1104-18.
    • (1993) Mol Cell Biol , vol.13 , pp. 1104-1118
    • Guo, M.1    Lo, P.C.H.2    Mount, S.M.3
  • 38
    • 25844481290 scopus 로고    scopus 로고
    • Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content
    • Hadrill PR, Charlesworth B, Halligan DL, Andolfatto P. 2005. Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content. Genome Biol 6:R67.
    • (2005) Genome Biol , vol.6
    • Hadrill, P.R.1    Charlesworth, B.2    Halligan, D.L.3    Andolfatto, P.4
  • 39
    • 0036262851 scopus 로고    scopus 로고
    • Distinguishing between selection and population expansion in an experimental lineage of bacteriophage T7
    • Hahn MW, Rausher MD, Cunningham CW. 2002. Distinguishing between selection and population expansion in an experimental lineage of bacteriophage T7. Genetics 161:11-20.
    • (2002) Genetics , vol.161 , pp. 11-20
    • Hahn, M.W.1    Rausher, M.D.2    Cunningham, C.W.3
  • 40
    • 1242296827 scopus 로고    scopus 로고
    • Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila
    • Halligan DL, Eyre-Walker A, Andolfatto P, Keightley PD. 2004. Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila. Genome Res 14:273-9.
    • (2004) Genome Res , vol.14 , pp. 273-279
    • Halligan, D.L.1    Eyre-Walker, A.2    Andolfatto, P.3    Keightley, P.D.4
  • 41
    • 33745612972 scopus 로고    scopus 로고
    • Ubiquitous selective constraints in the Drosophila genome revealed by genome-wide interspecies comparison
    • Halligan DL, Keightley PD. 2006. Ubiquitous selective constraints in the Drosophila genome revealed by genome-wide interspecies comparison. Genome Res 16:875-84.
    • (2006) Genome Res , vol.16 , pp. 875-884
    • Halligan, D.L.1    Keightley, P.D.2
  • 42
    • 0032976592 scopus 로고    scopus 로고
    • The neutralist, the fly, and the selectionist
    • Hey J. 1999. The neutralist, the fly, and the selectionist. Trends Ecol Evol 14:35-8.
    • (1999) Trends Ecol Evol , vol.14 , pp. 35-38
    • Hey, J.1
  • 43
    • 0036188913 scopus 로고    scopus 로고
    • Interactions between natural selection, recombination and gene density in the genes of Drosophila
    • Hey J, Kliman RM. 2002. Interactions between natural selection, recombination and gene density in the genes of Drosophila. Genetics 160:595-608.
    • (2002) Genetics , vol.160 , pp. 595-608
    • Hey, J.1    Kliman, R.M.2
  • 44
    • 0013979181 scopus 로고
    • The effect of linkage on the limits of artificial selection
    • Hill WG, Robertson A. 1966. The effect of linkage on the limits of artificial selection. Genet Res 8:269-94.
    • (1966) Genet Res , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 45
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model of genetic variation
    • Hudson RR. 2002. Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 18:337-8.
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.R.1
  • 46
    • 0027486933 scopus 로고
    • P-element-induced interallelic gene conversion of insertions and deletions in Drosophila melanogaster
    • Johnson-Schlitz DM, Engels WR. 1993. P-element-induced interallelic gene conversion of insertions and deletions in Drosophila melanogaster. Mol Cell Biol 13:7006-18.
    • (1993) Mol Cell Biol , vol.13 , pp. 7006-7018
    • Johnson-Schlitz, D.M.1    Engels, W.R.2
  • 47
    • 10344256696 scopus 로고    scopus 로고
    • Patterns of polymorphism and divergence from noncoding sequences of Drosophila melanogaster and D. Simulans: Evidence for nonequilibrium processes
    • Kern AD, Begun DJ. 2005. Patterns of polymorphism and divergence from noncoding sequences of Drosophila melanogaster and D. Simulans: evidence for nonequilibrium processes. Mol Biol Evol 22:51-62.
    • (2005) Mol Biol Evol , vol.22 , pp. 51-62
    • Kern, A.D.1    Begun, D.J.2
  • 48
    • 0029026878 scopus 로고
    • Maintenance of pre-mRNA secondary structure by epistatic selection
    • Kirby DA, Muse SV, Stephan W. 1995. Maintenance of pre-mRNA secondary structure by epistatic selection. Proc Natl Acad Sci USA 92:9047-51.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 9047-9051
    • Kirby, D.A.1    Muse, S.V.2    Stephan, W.3
  • 49
    • 0027383354 scopus 로고
    • Reduced natural selection associated with low recombination in Drosophila melanogaster
    • Kliman RM, Hey J. 1993. Reduced natural selection associated with low recombination in Drosophila melanogaster. Mol Biol Evol 10:1239-58.
    • (1993) Mol Biol Evol , vol.10 , pp. 1239-1258
    • Kliman, R.M.1    Hey, J.2
  • 50
    • 0001578051 scopus 로고    scopus 로고
    • Tempo and mode of even skipped stripe 2 enhancer evolution in Drosophila
    • Kreitman M, Ludwig MZ. 1996. Tempo and mode of even skipped stripe 2 enhancer evolution in Drosophila. Cell Dev Biol 7:583-92.
    • (1996) Cell Dev Biol , vol.7 , pp. 583-592
    • Kreitman, M.1    Ludwig, M.Z.2
  • 52
    • 0028799521 scopus 로고
    • Constraints on intron evolution in the gene encoding the myosin alkali light chain in Drosophila
    • Leicht BG, Muse SV, Hanczyc M, Clark AG. 1995. Constraints on intron evolution in the gene encoding the myosin alkali light chain in Drosophila. Genetics 139:299-308.
    • (1995) Genetics , vol.139 , pp. 299-308
    • Leicht, B.G.1    Muse, S.V.2    Hanczyc, M.3    Clark, A.G.4
  • 53
    • 0000399844 scopus 로고
    • Inversion polymorphisms in Drosophila melanogaster
    • Krimbas CB, Powell JR, eds. Boca Raton, FL: CRC Press
    • Lemeunier F, Aulard S. 1992. Inversion polymorphisms in Drosophila melanogaster. In: Krimbas CB, Powell JR, eds. Drosophila Inversion Polymorphism. Boca Raton, FL: CRC Press. p 339-405.
    • (1992) Drosophila Inversion Polymorphism , pp. 339-405
    • Lemeunier, F.1    Aulard, S.2
  • 55
    • 0033178244 scopus 로고    scopus 로고
    • Paleo-demography of the Drosophila melanogaster subgroup: Application of the maximum likelihood method
    • Li YJ, Satta Y, Takahata N. 1999. Paleo-demography of the Drosophila melanogaster subgroup: application of the maximum likelihood method. Genes Genet Syst 74:117-27.
    • (1999) Genes Genet Syst , vol.74 , pp. 117-127
    • Li, Y.J.1    Satta, Y.2    Takahata, N.3
  • 56
    • 0003147874 scopus 로고
    • Evolution of satellite DNA sequences in Drosophila
    • Verma RS, editor. Cambridge, UK: Cambridge University Press
    • Lohe A, Roberts P. 1988. Evolution of satellite DNA sequences in Drosophila. In: Verma RS, editor. Heterochromatin: molecular and structural aspects. Cambridge, UK: Cambridge University Press. p 148-86.
    • (1988) Heterochromatin: Molecular and Structural Aspects , pp. 148-186
    • Lohe, A.1    Roberts, P.2
  • 57
    • 0000695532 scopus 로고
    • Inter-chromosomal effects
    • Ashburner M, Novitski E, eds. New York: Academic Press
    • Lucchesi JC. 1976. Inter-chromosomal effects. In: Ashburner M, Novitski E, eds. Genetics and Biology of Drosophila. New York: Academic Press. p 315-30.
    • (1976) Genetics and Biology of Drosophila , pp. 315-330
    • Lucchesi, J.C.1
  • 58
    • 0038543069 scopus 로고    scopus 로고
    • Biased gene conversion: Implications for genome and sex evolution
    • Marais G. 2003. Biased gene conversion: implications for genome and sex evolution. Trends Genet 19:330-8.
    • (2003) Trends Genet , vol.19 , pp. 330-338
    • Marais, G.1
  • 60
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M. 1991. Adaptive protein evolution at the Adh locus in Drosophila. Nature 351:652-4.
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 61
    • 0035157374 scopus 로고    scopus 로고
    • Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila
    • McVean GAT, Viera J. 2001. Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila. Genetics 157:245-57.
    • (2001) Genetics , vol.157 , pp. 245-257
    • McVean, G.A.T.1    Viera, J.2
  • 62
    • 0002636459 scopus 로고    scopus 로고
    • Annotation of the Drosophila melanogaster euchromatic genome: A systematic review
    • RESEARCH0083
    • Misra S, Crosby M, Mungall C, et al. (30 co-authors). 2002. Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. Genome Biol 3:RESEARCH0083.
    • (2002) Genome Biol , vol.3
    • Misra, S.1    Crosby, M.2    Mungall, C.3
  • 63
    • 0032945593 scopus 로고    scopus 로고
    • DIALIGN 2: Improvement of the segment-to-segment approach to multiple sequence alignment
    • Morgenstern B. 1999. DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment. Bioinformatics 15:211-8.
    • (1999) Bioinformatics , vol.15 , pp. 211-218
    • Morgenstern, B.1
  • 64
    • 0027153966 scopus 로고
    • Codon usage bias and base composition of nuclear genes in Drosophila
    • Moriyama EN, Hartl DL. 1993. Codon usage bias and base composition of nuclear genes in Drosophila. Genetics 134:847-58.
    • (1993) Genetics , vol.134 , pp. 847-858
    • Moriyama, E.N.1    Hartl, D.L.2
  • 66
    • 0026657738 scopus 로고
    • Splicing signals in Drosophila: Intron size, information content and consensus sequences
    • Mount SM, Burks C, Hertz G, Stormo GD, White O, Fields C. 1992. Splicing signals in Drosophila: intron size, information content and consensus sequences. Nucleic Acids Res 20:4255-62.
    • (1992) Nucleic Acids Res , vol.20 , pp. 4255-4262
    • Mount, S.M.1    Burks, C.2    Hertz, G.3    Stormo, G.D.4    White, O.5    Fields, C.6
  • 67
    • 0021077332 scopus 로고
    • Evolution of a finite population under gene conversion
    • Nagylaki T. 1983. Evolution of a finite population under gene conversion. Proc Natl Acad Sci USA 80:6278-81.
    • (1983) Proc Natl Acad Sci USA , vol.80 , pp. 6278-6281
    • Nagylaki, T.1
  • 68
    • 17444402039 scopus 로고    scopus 로고
    • Insertion/deletion and nucleotide polymorphism data reveal constraints in Drosophila melanogaster introns and intergenic regions
    • Ometto L, Stephan W, De Lorenzo D. 2005. Insertion/deletion and nucleotide polymorphism data reveal constraints in Drosophila melanogaster introns and intergenic regions. Genetics 169:1521-7.
    • (2005) Genetics , vol.169 , pp. 1521-1527
    • Ometto, L.1    Stephan, W.2    De Lorenzo, D.3
  • 69
    • 0347361692 scopus 로고    scopus 로고
    • Selective constraints on intron evolution in Drosophila
    • Parsch J. 2003. Selective constraints on intron evolution in Drosophila. Genetics 165:1843-51.
    • (2003) Genetics , vol.165 , pp. 1843-1851
    • Parsch, J.1
  • 70
    • 0031891484 scopus 로고    scopus 로고
    • High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups
    • Petrov DA, Hartl DL. 1998. High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups. Mol Biol Evol 15:293-302.
    • (1998) Mol Biol Evol , vol.15 , pp. 293-302
    • Petrov, D.A.1    Hartl, D.L.2
  • 71
    • 0029856377 scopus 로고    scopus 로고
    • High intrinsic rate of DNA loss in Drosophila
    • Petrov DA, Lozovskaya ER, Hartl DL. 1996. High intrinsic rate of DNA loss in Drosophila. Nature 384:346-9.
    • (1996) Nature , vol.384 , pp. 346-349
    • Petrov, D.A.1    Lozovskaya, E.R.2    Hartl, D.L.3
  • 72
    • 1942485873 scopus 로고    scopus 로고
    • Intron size correlates positively with recombination rate in Caenorhabditis elegans
    • Prachumwat A, DeVincentis L, Palopoli MF. 2004. Intron size correlates positively with recombination rate in Caenorhabditis elegans. Genetics 166:1585-90.
    • (2004) Genetics , vol.166 , pp. 1585-1590
    • Prachumwat, A.1    Devincentis, L.2    Palopoli, M.F.3
  • 73
    • 24944577454 scopus 로고    scopus 로고
    • Recombination enhances protein adaptation in Drosophila melanogaster
    • Presgraves DC. 2005. Recombination enhances protein adaptation in Drosophila melanogaster. Curr Biol 15:1651-6.
    • (2005) Curr Biol , vol.15 , pp. 1651-1656
    • Presgraves, D.C.1
  • 74
    • 0036862056 scopus 로고    scopus 로고
    • How intron splicing affects the deletion and insertion profile in Drosophila melanogaster
    • Ptak SE, Petrov DA. 2002. How intron splicing affects the deletion and insertion profile in Drosophila melanogaster. Genetics 162:1233-44.
    • (2002) Genetics , vol.162 , pp. 1233-1244
    • Ptak, S.E.1    Petrov, D.A.2
  • 75
    • 11244324849 scopus 로고    scopus 로고
    • Intragenic spatial patterns of codon usage bias in prokaryotic and eukaryotic genomes
    • Qin H, Wu WB, Comeron JM, Kreitman M, Li W-H. 2004. Intragenic spatial patterns of codon usage bias in prokaryotic and eukaryotic genomes. Genetics 168:2245-60.
    • (2004) Genetics , vol.168 , pp. 2245-2260
    • Qin, H.1    Wu, W.B.2    Comeron, J.M.3    Kreitman, M.4    Li, W.-H.5
  • 76
    • 15244351357 scopus 로고    scopus 로고
    • Molecular determinants and guided evolution of species-specific RNA editing
    • Reenan RA. 2005. Molecular determinants and guided evolution of species-specific RNA editing. Nature 434:409-13.
    • (2005) Nature , vol.434 , pp. 409-413
    • Reenan, R.A.1
  • 78
    • 0346991747 scopus 로고    scopus 로고
    • Heterochromatic self-association, a determinant of nuclear organization, does not require sequence homology in Drosophila
    • Sage BT, Csink AK. 2003. Heterochromatic self-association, a determinant of nuclear organization, does not require sequence homology in Drosophila. Genetics 165:1183-93.
    • (2003) Genetics , vol.165 , pp. 1183-1193
    • Sage, B.T.1    Csink, A.K.2
  • 79
    • 0036999964 scopus 로고    scopus 로고
    • Molecular population genetics of sequence length diversity in the Adh region of Drosophila pseudoobscura
    • Schaeffer SW. 2002. Molecular population genetics of sequence length diversity in the Adh region of Drosophila pseudoobscura. Genet Res 80:163-75.
    • (2002) Genet Res , vol.80 , pp. 163-175
    • Schaeffer, S.W.1
  • 80
    • 0024116811 scopus 로고
    • "Silent" sites in Drosophila genes are not neutral: Evidence of selection among synonymous codons
    • Shields D, Sharp P, Higgins D, Wright F. 1988. "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. Mol Biol Evol 5:704-16.
    • (1988) Mol Biol Evol , vol.5 , pp. 704-716
    • Shields, D.1    Sharp, P.2    Higgins, D.3    Wright, F.4
  • 81
    • 0029099781 scopus 로고
    • Properties of statistical tests of neutrality for DNA polymorphism data
    • Simonsen KL, Churchill GA, Aquadro CF. 1995. Properties of statistical tests of neutrality for DNA polymorphism data. Genetics 141:413-29.
    • (1995) Genetics , vol.141 , pp. 413-429
    • Simonsen, K.L.1    Churchill, G.A.2    Aquadro, C.F.3
  • 82
    • 25144452814 scopus 로고    scopus 로고
    • Codon bias and noncoding GC content correlate negatively with recombination rate on the Drosophila X chromosome
    • Singh ND, Davis JC, Petrov DA. 2005. Codon bias and noncoding GC content correlate negatively with recombination rate on the Drosophila X chromosome. J Mol Evol 61:315-24.
    • (2005) J Mol Evol , vol.61 , pp. 315-324
    • Singh, N.D.1    Davis, J.C.2    Petrov, D.A.3
  • 83
    • 0027963390 scopus 로고
    • Molecular evolution of the metallothionein gene Mtn in the melanogaster species group: Results from Drosophila ananassae
    • Stephan W, Rodriguez VS, Zhou B, Parsch J. 1994. Molecular evolution of the metallothionein gene Mtn in the melanogaster species group: results from Drosophila ananassae. Genetics 138:135-43.
    • (1994) Genetics , vol.138 , pp. 135-143
    • Stephan, W.1    Rodriguez, V.S.2    Zhou, B.3    Parsch, J.4
  • 84
    • 0002288103 scopus 로고
    • The genetics of Drosophila simulans
    • Sturtevant AH. 1929. The genetics of Drosophila simulans. Carneg Inst Wash Pub 399:1-62.
    • (1929) Carneg Inst Wash Pub , vol.399 , pp. 1-62
    • Sturtevant, A.H.1
  • 85
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-95.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 86
    • 0028288693 scopus 로고
    • Intron definition in splicing of small Drosophila introns
    • Talerico M, Berget SM. 1994. Intron definition in splicing of small Drosophila introns. Mol Cell Biol 14:3434-45.
    • (1994) Mol Cell Biol , vol.14 , pp. 3434-3445
    • Talerico, M.1    Berget, S.M.2
  • 87
    • 1242352089 scopus 로고    scopus 로고
    • Temporal patterns of fruitfly (Drosophila) evolution revealed by mutation clocks
    • Tamura K, Subramanian S, Kumar S. 2004. Temporal patterns of fruitfly (Drosophila) evolution revealed by mutation clocks. Mol Biol Evol 21:36-44.
    • (2004) Mol Biol Evol , vol.21 , pp. 36-44
    • Tamura, K.1    Subramanian, S.2    Kumar, S.3
  • 88
    • 33644763127 scopus 로고    scopus 로고
    • Approximate Bayesian inference reveals evidence for a recent, severe, bottleneck in non-African populations of Drosophila melanogaster
    • Thornton K, Andolfatto P. 2006. Approximate Bayesian inference reveals evidence for a recent, severe, bottleneck in non-African populations of Drosophila melanogaster. Genetics 172:1607-19.
    • (2006) Genetics , vol.172 , pp. 1607-1619
    • Thornton, K.1    Andolfatto, P.2
  • 89
    • 0142092546 scopus 로고    scopus 로고
    • The signature of selection mediated by expression on human genes
    • Urrutia AO, Hurst LD. 2003. The signature of selection mediated by expression on human genes. Genome Res 13:2260-4.
    • (2003) Genome Res , vol.13 , pp. 2260-2264
    • Urrutia, A.O.1    Hurst, L.D.2
  • 90
    • 0032823323 scopus 로고    scopus 로고
    • Wake up of transposable elements following Drosophila simulans worldwide colonization
    • Viera C, Lepetit D, Dumont S, Biemont C. 1999. Wake up of transposable elements following Drosophila simulans worldwide colonization. Mol Biol Evol 16:1251-5.
    • (1999) Mol Biol Evol , vol.16 , pp. 1251-1255
    • Viera, C.1    Lepetit, D.2    Dumont, S.3    Biemont, C.4
  • 91
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson GA. 1975. On the number of segregating sites in genetical models without recombination. Theor Popul Biol 7:256-76.
    • (1975) Theor Popul Biol , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 92
    • 1242293743 scopus 로고    scopus 로고
    • Fixation biases affecting human SNPs
    • Webster MT, Smith NGC. 2004. Fixation biases affecting human SNPs. Trends Genet 20:122-6.
    • (2004) Trends Genet , vol.20 , pp. 122-126
    • Webster, M.T.1    Smith, N.G.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.