Genomic instability of human aberrant crypt foci measured by inter-(simple sequence repeat) PCR and array-CGH

Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis

Volumn 601, Issue 1-2, 2006, Pages 30-38

  Alrawi, Sadir J ^a   Carroll, Robert E ^b   Hill, Hank C ^a   Gibbs, John F ^a   Tan, Dongfeng ^a   Brenner, Bruce M ^c   Nowak, Norma J ^a   Swede, Helen ^d   Stoler, Daniel L ^a   Anderson, Garth R ^a  

^a ROSWELL PARK CANCER INSTITUTE   (United States)

^b UNIVERSITY OF ILLINOIS AT CHICAGO   (United States)

^c MEDICAL COLLEGE OF WISCONSIN   (United States)

^d UNIVERSITY OF CONNECTICUT HEALTH CENTER   (United States)

Author keywords

Aberrant crypt foci; Colorectal cancer; Genomic instability

Indexed keywords

ADULT; AGED; ANALYTIC METHOD; ARTICLE; CARCINOGENESIS; CLINICAL ARTICLE; COLORECTAL CANCER; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; CRYPT CELL; FEMALE; GENE AMPLIFICATION; GENE DELETION; GENOMIC INSTABILITY; HISTOPATHOLOGY; HUMAN; HUMAN TISSUE; INTERMETHOD COMPARISON; MALE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SIMPLE SEQUENCE REPEAT;

AGED, 80 AND OVER; CHROMOSOMES, ARTIFICIAL, BACTERIAL; COLORECTAL NEOPLASMS; FEMALE; GENOME, HUMAN; GENOMIC INSTABILITY; HUMANS; MALE; MIDDLE AGED; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; PRECANCEROUS CONDITIONS;

EID: 33749511582     PISSN: 00275107     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mrfmmm.2006.05.022     Document Type: Article

References (31)

1. Winawer S.J., Zauber A.G., Ho M.N., O'Brien M.J., Gottleib L.S., Sternberg S.S., Waye J.D., Schapiro M., Bond J.H., Panish J.F., Ackroyd F., Shike M., Kurtz R.C., Hornsby-Lewis L., Gerdes H., Stewart E.T., and the National Polyp Study Workgroup. Prevention of colorectal cancer by colonoscopic polypectomy. N. Engl. J. Med. 329 (1993) 1977-1983
2. Luo L., Biaoru L., and Pretlow T.P. DNA alterations in human aberrant crypt foci and colon cancers by random primed polymerase chain reaction. Cancer Res. 63 (2003) 6166-6169
3. Bartos J.D., Stoler D.L., Matsui S.-I., Swede H., Willmott L.J., Sait S.N., Petrelli N.J., and Anderson G.R. Genomic instability and heterogeneity in colorectal cancer; spectral karyotyping, glutathione transferase-M1 and ras. Mutat. Res. 568 (2004) 283-292
4. Chen R., Rabinovitch P.S., Crispin D.A., Emond M.J., Bronner M.P., and Brentnall T.A. The initiation of colon cancer in a chronic inflammatory setting. Carcinogenesis 26 (2005) 1513-1519
5. McLellan E.A., Medline A., and Bird R.P. Sequential analyses of the growth and morphological characteristics of aberrant crypt foci. Cancer Res. 51 (1991) 5270-5274
6. Roncucci L., Stamp D., Medline A., Cullen J.B., and Bruce W.R. Identification and quantification of aberrant crypt foci and microadenomas in the human colon. Hum. Pathol. 22 (1991) 287-294
7. Bird R.P. Role of aberrant crypt foci in understanding the pathogenesis of colon cancer. Cancer Lett. 93 (1995) 55-71
8. Takayama T., Katsuki S., Takahashi Y., Ohi M., Nojiri S., Sakamaki S., Kato J., Kogawa K., Miyake H., and Niitsu Y. Aberrant crypt foci of the colon as precursors of adenoma and cancer. N. Engl. J. Med. 339 (1998) 1277-1284
9. Takayama T., Ohi M., Hayashi T., Miyanishi K., Nobuoka A., Nakajima T., Satoh T., Takimoto R., Kato J., Sakamaki S., and Niitsu Y. Analysis of K-ras, APC, and beta-catenin in aberrant crypt foci in sporadic, cancer, and familial adenomatous polyposis. Gastroenterology 121 (2001) 599-611
10. Smith A.J., Stern H.S., Penner M., Hay K., Mitri A., Bapat B.V., and Gallinger S. Som somatic APC and K-ras codon 12 mutations in aberrant crypt foci from human colons. Cancer Res. 54 (1994) 27-30
11. Yamashita N., Minamoto T., Ochiai A., Onda M., and Esumi H. Frequent and characteristic K-ras activation and absence of p53 protein accumulation in aberrant crypt foci of the colon. Gastroenterology 108 (1995) 434-440
12. Otori K., Konishi M., Sugiyama K., Hasebe T., Shimoda T., Kikuchi-Yanoshita R., Mukai K., and Esumi H. Infrequent somatic mutation of the adenomatous polyposis coli gene in aberrant crypt foci of human colon tissue. Cancer 83 (1998) 896-900
13. Shpitz B., Bomstein Y., Shalev M., Liverant S., Kaufman Z., Klein E., Mekori Y., and Bernheim J. Oncoprotein coexpression in human aberrant crypt foci and minute polypoid lesions of the large bowel. Anticancer Res. 19 (1999) 3361-3366
14. Pedroni M., Sala E., Scarselli A., Borghi F., Menigatti M., Benatti P., Percesepe A., Rossi G., Foroni M., Losi L., Di Gregorio C., De Pol A., Nascimbeni R., Di Betta E., Salerni B., de Leon M.P., and Roncucci L. Microsatellite instability and mismatch repair protein expression in hereditary and sporadic colorectal carcinogenesis. Cancer Res. 61 (2001) 896-899
15. Nambiar P.R., Nakanishi M., Gupta P., Cheung E., Firouzi A., Xiao-Jun M., Flynn C., Dong M., Guda K., Levine J., Raja R., Achenie L., and Rosenberg D.W. Genetic signatures of high- and low-risk aberrant crypt foci in mouse model of sporadic colon cancer. Cancer Res. 64 (2004) 6394-6401
16. Anderson G.R., Stoler D.L., and Brenner B.M. Cancer: the evolved consequence of a destabilized genome. BioEssays 23 (2001) 1037-1046
17. Roncucci L., Medline A., and Bruce W.R. Classification of aberrant crypt foci and microadenomas in human colon. Cancer Epid. Bio. Prev. 1 (1991) 57-60
18. Stoler D.L., Chen N., Basik M., Kahlenberg M.S., Rodriguez-Bigas M.A., Petrelli N.J., and Anderson G.R. The onset and extent of genomic instability in sporadic colorectal tumor progression. Proc. Natl. Acad. Sci. U.S.A. 96 (1999) 5121-5126
19. Basik M., Stoler D.L., Kontzoglou K.C., Rodriguez-Bigas M.A., Petrelli N.J., and Anderson G.R. Genomic instability in sporadic colorectal cancer quantitated by inter-(simple sequence repeat) PCR analysis. Genes Chromosomes Cancer 18 (1997) 19-29
20. Kim D., Pemberton H., Stratford A.L., Buelaert K., Watkinson J.C., Lopes V., Franklin J.A., and McCabe C.J. Pituitary tumor transforming gene PTTG induces genetic instability in thyroid cells. Oncogene 24 (2005) 4861-4866
21. Cowell J.K., and Nowak N.J. High resolution analysis of genetic events in cancer cells using BAC array and comparative genomic hybridization. Adv. Cancer Res. 90 (2003) 91-125
22. Navone N.M., Troncoso P., Pisters L.L., Goodrow T.L., Palmer J.L., Nichols W.W., von Eschenbach A.C., and Conti C.J. p53 protein accumulation and gene mutation in the progression of human prostate carcinoma. J. Natl. Cancer. Inst. 85 (1993) 1657-1669
23. Chen N., Stoler D.L., Jahreis J.P., and Anderson G.R. Analysis of inter-(simple sequence repeat) PCR products from human colorectal cancers. Oncol. Res. 15 (2005) 233-238
24. Anderson G.R., Brenner B.M., Swede H., Chen N., Henry W.M., Conroy J.M., Karpenko M.J., Issa J.-P., Bartos J.D., Brunelle J.K., Jahreis G.P., Kahlenberg M.S., Basik M., Sait S., Rodriguez-Bigas M.A., Nowak N.J., Petrelli N.J., Shows T.B., and Stoler D.L. Intrachromosomal genomic instability in human sporadic colorectal cancer measured by genome-wide allelotyping and inter-(simple sequence repeat) PCR. Cancer Res. 61 (2001) 8274-8283
25. Moen C.J., van der Valk M.A., Bird R.P., Hart A.A., and Demant P. Different genetic susceptibility to aberrant crypts and colon adenomas in mice. Cancer Res. 56 (1996) 2382-2386
26. Hardman W.E., Cameron I.L., Heitman D.W., and Contreras E. Demonstration of the need for end point validation of putative biomarkers: failure of aberrant crypt foci to predict colon cancer incidence. Cancer Res. 51 (1991) 6388-6392
27. Cheng L., and Lai M.D. Aberrant crypt foci as microscopic precursors of colorectal cancer. World J. Gastroenterol. 9 (2003) 2642-2649
28. Roncucci L., Pedroni M., Fante R., di Gregorio C., and Ponz de Leon M. Cell kinetic evaluation of human colonic aberrant crypts. Cancer Res. 53 (1993) 3726-3729
29. Pretlow T.P., Brasitus T.A., Fulton N.C., Cheyer C., and Kaplan E.L. K-ras mutations in putative preneoplastic lesions in human colon. J. Natl. Cancer Inst. 85 (1993) 2004-2007
30. Losi L., Roncucci L., di Gregorio C., de Leon M.P., and Bunhattas J. K-ras and p53 mutations in human colorectal aberrant crypt foci. J. Pathol. 178 (1996) 259-263
31. Augenlicht L.H., Richards C., Corner G., and Pretlow T.P. Evidence for genomic instability in human colonic aberrant crypt foci. Oncogene 12 (1996) 1767-1772