The software interface to the 3D-force microscope

Proceedings of the IEEE Visualization Conference

Volumn , Issue , 2005, Pages 58-

  Marshburn, David ^a   Weigle, Chris ^a   Wilde, Benjamin G ^a   Taylor II, Russell M ^a   Desai, Kalpit ^b   Fisher, J K ^b   Cribb, Jeremy ^b   O'Brien, E Timothy ^a   Superfine, R ^a  

^a UNIVERSITY OF NORTH CAROLINA   (United States)

^b NORTH CAROLINA STATE UNIVERSITY   (United States)

Author keywords

Applications of visualization; Force; Haptics; Interactive graphics; Microscopy; Multimodal visualization; Scientific visualization; Virtual worlds

Indexed keywords

3D-FORCE MICROSCOPE (3DFM); MULTIMODAL VISUALIZATION; SCIENTIFIC VISUALIZATION; VIRTUAL WORLDS;

DATA ACQUISITION; FEEDBACK; INTERACTIVE COMPUTER GRAPHICS; MODAL ANALYSIS; NANOTECHNOLOGY; OPTICAL MICROSCOPY; REAL TIME SYSTEMS;

HAPTIC INTERFACES;

EID: 33749448403     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/VIS.2005.101     Document Type: Conference Paper

References (23)

1. M.W. Allersma, F. Gittes, M.J. deCastro, R.J. Stewart, and C.F. Schmidt, Two-dimensional particle tracking of ncd motility by back focal plane interferometry. Biophys. J. 74: pp. 1074-1085. 1998.
2. A. Bausch, F. Ziemann, A.A. Boulbitch, K. Jacobson, and E. Sackmann, Local measurements of viscoelastic parameters of adherent cell surfaces by magnetic bead microrheometry. Biohpys. J. 75: pp. 2038-2049. 1998.
3. A. Bausch, W. Möller, and E. Sackmann, Measurement of local viscosity and forces in living cells by magnetic tweezers. Biophys. J. 76: pp. 573-579. 1999.
4. K.V. Desai. Agnostic tracking. In preparation.
5. M. Falvo, M. Finch, et al. The Nanomanipulator: A Teleoperator for Manipulating Materials at the Nanometer Scale. Proceedings of the 5th International Symposium on the Science and Engineering of Atnmically Engineered Materials, Richmond, VA, World Scientific Publishing, pp. 579-586. 1995.
6. J.K. Fisher, L. Vicci, J. Cummings, K. Keller, B. Wilde, E. Timothy O'Brien, K.V. Desai, C. Weigle, G. Bishop, C. Davis, R. Boucher, R.M. Taylor, II, R. Superfine. 3D Force Microscope: a nanometric optical tracking and magnetic manipulation system for the biomedical sciences. To appear in Review of Scientific Instruments (accepted 3/25/05). 2005.
7. J.K. Fisher, L. Vicci, K.V. Desai, J. Cribb, B. Wilde, K. Keller, E. Timothy O'Brien, K. Bloom, R.M. Taylor, II, R. Superfine. A Three-Dimensional Force Microscope for the Biomedical Sciences. In preparation.
8. F. Gittes and C.F. Schmidt, Thermal noise limitations on micromechanical experiments. Eur. Biophys. J. 27: pp. 75-81. 1998.
9. F. Gittes and C.F. Schmidt, Interference model for back focal plane displacement detection in optical tweezers. Optics Lett., 1998.
10. G. Gorla, V. Interrante and G. Sapiro. Texture synthesis for 3D shape representation. IEEE Trans. on Visualization and Computer Graphics. Vol. 9, no. 4. pp. 512-524. 2003.
11. D.B. Hill., Hiroshi Matsui, Jeremy Cribb, J. Sheehan; A. Yancey, S.I Massenburg, R. Boucher, and R. Superfine, "Microbead Rheology of Human Mucus: Effect of percent solids on Viscoelasticity and Heterogeneity," Submitted to Biophysical Journal, 2005.
12. V. Interrante, H. Fuchs and S. Pizer. Illustrating transparent surfaces with curvature-directed strokes. Visualization '96. IEEE Computer Society, pp. 211-218. 1996.
13. V. Interrante, H. Fuchs and S. Pizer. Conveying the 3D shape of smoothly curving transparent surfaces via texture. IEEE Trans. on Visualization and Computer Graphics, IEEE Computer Society. Vol. 3, no. 2, pp 98-117. 1997.
14. H. Matsui, V.E. Wagner, D.B. Hill, U. Schwab, T.D. Rogers, B. Button, R.M. Taylor II, R. Superfine, M. Rubinstein, B.H. Iglewski, R.C. Boucher, "A physical linkage between CF airway surface dehydration and P. aeruginosa biofilms," Submitted to Developmental Cell. 2005.
15. A. Mehta, J.T. Finer, and J.A. Spudich, Reflections of a lucid dreamer: optical trap design considerations, in Methods in Cell Biology. Academic Press: New York. p. 47-69. 1998.
16. G. Sakas, M. G. Vicker, et al. Case Study: Visualization of Laser Confocal Microscopy Datasets. Visualization '96, San Francisco, IEEE Computer Society Press. 375-379. 1996.
17. R. Superfine, G. Bishop, J. Cummings, J. Fisher, K. Keller, G. Matthews, D. Sill, R. M. Taylor II, L. Vicci, C. Weigle, G. Welch and B. Wilde. "Touching In Biological Systems: A 3D Force Microscope." Proceedings of Microscopy and Microanalysis 2002, Quebec City, Canada. 2002.
18. R.M. Taylor II, W. Robinett, V. L. Chi, F.P Brooks, W.V. Wright, R.S. Williams and E. Snyder. The Nanomanipulator: A Virtual-Reality Interface for a Scanning Tunneling Microscope. SIGGRAPH 93, Anaheim, California, ACM SIGGRAPH. 127-134. 1993.
19. R.M. Taylor II, J. Chen, S. Okimoto, N. Llopis-Artime, V.L. Chi, F.P. Brooks, M. Falvo, S. Paulson, P. Thiansathaporn, D. Glick, S. Washburn and R. Superfine. Pearls Found on the way to the Ideal Interface for Scanned-probe Microscopes. Visualization '97, Phoenix, AZ, IEEE Computer Society Press. 467-470. 1997.
20. R.M. Taylor II, T.C. Hudson, A. Seeger, H. Weber, J. Juliano and A.T. Heiser. "VRPN: A Device-Independent, Network-Transparent VR Peripheral System." Proceedings of ACM Symposium on Virtual Reality Software & Technology 2001, Banff Centre, Canada. 2001.
21. R.M. Taylor II, D. Borland, F. P. Brooks Jr., M. Falvo, M. Guthold, T. Hudson, K. Jeffay, G. Jones, D. Marshburn, S. J. Papadakis, L.-C. Qin, A. Seeger, F. D. Smith, D. H. Sonnenwald, R. Superfine, S. Washburn, C. Weigle, M. C. Whitton, P. Williams, L. Vicci and W. Robinett. Visualization and Natural Control Systems for Microscopy. In: Visualization Handbook. C. J. a. C. Hansen, Harcourt Academic Press: 875-900. 2004.
22. G. Turk. Texture synthesis on surfaces. Siggraph '01. 2001. pp. 347-354. 2001.
23. L. Vicci. Analytical bead force model for the 3DFM. UNC Technical Report TR03-029. 2003.