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Volumn , Issue , 2005, Pages 139-140

RNAMute: RNA secondary structure mutation analysis tool

Author keywords

[No Author keywords available]

Indexed keywords

EIGENVALUES AND EIGENFUNCTIONS; GRAPH THEORY; INTERACTIVE COMPUTER SYSTEMS; LAPLACE TRANSFORMS; MATRIX ALGEBRA; RNA;

EID: 33749052074     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/CSBW.2005.120     Document Type: Conference Paper
Times cited : (1)

References (13)
  • 1
    • 4444311170 scopus 로고    scopus 로고
    • Second eigenvalue of the Laplacian matrix for predicting RNA conformational switch by mutation
    • D. Barash, "Second Eigenvalue of the Laplacian Matrix for Predicting RNA Conformational Switch by Mutation," Bioinformatics, Vol.20(12), pp.1861-1869, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.12 , pp. 1861-1869
    • Barash, D.1
  • 2
    • 0001350119 scopus 로고
    • Algebraic connectivity of graphs
    • M. Fiedler,"Algebraic Connectivity of Graphs,"Czechoslovak Math. J., Vol.23, pp.298-305, 1973.
    • (1973) Czechoslovak Math. J. , vol.23 , pp. 298-305
    • Fiedler, M.1
  • 4
    • 0043123153 scopus 로고    scopus 로고
    • Vienna RNA secondary structure server
    • I.L. Hofacker, "Vienna RNA Secondary Structure Server," Nucleic Acids Res., Vol.31, pp.3429-3431, 2003.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3429-3431
    • Hofacker, I.L.1
  • 5
    • 0024386096 scopus 로고
    • Tree graphs of RNA secondary structures and their comparisons
    • S.Y. Le, R. Nussinov, and J.V. Maizel. Tree graphs of RNA secondary structures and their comparisons. Comput. Appl. Biosci., 22:461-473, 1989.
    • (1989) Comput. Appl. Biosci. , vol.22 , pp. 461-473
    • Le, S.Y.1    Nussinov, R.2    Maizel, J.V.3
  • 6
    • 0028262140 scopus 로고
    • Kinetics of an RNA molecular switch
    • K.A. LeCuyer, and D.M. Crothers, "Kinetics of an RNA Molecular Switch," Proc. Natl. Acad. Sci., Vol.91, pp.3373-3377, 1994.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 3373-3377
    • Lecuyer, K.A.1    Crothers, D.M.2
  • 8
    • 0002161806 scopus 로고
    • Characteristic vertices of trees
    • R. Merris. Characteristic vertices of trees. Lin. Multi. Alg., 22:115-131, 1987.
    • (1987) Lin. Multi. Alg. , vol.22 , pp. 115-131
    • Merris, R.1
  • 9
    • 0025187499 scopus 로고
    • Comparing multiple RNA secondary structures using tree comparisons
    • B.A. Shapiro and K. Zhang. Comparing multiple RNA secondary structures using tree comparisons. Comput. Appl. Biosci. 6:309-318, 1990.
    • (1990) Comput. Appl. Biosci. , vol.6 , pp. 309-318
    • Shapiro, B.A.1    Zhang, K.2
  • 10
    • 0024061490 scopus 로고
    • An algorithm for comparing multiple RNA secondary structures
    • B.A. Shapiro, "An Algorithm for Comparing Multiple RNA Secondary Structures," Comput. Appl. Biosci., Vol.4, pp.387-393, 1988.
    • (1988) Comput. Appl. Biosci. , vol.4 , pp. 387-393
    • Shapiro, B.A.1
  • 11
    • 0030846785 scopus 로고    scopus 로고
    • Characteristics of nucleotide substitution in the hepatitis C virus genome: Constraints on the sequence change in coding regions at both ends of the genome
    • D.B. Smith and P. Simmonds, "Characteristics of Nucleotide Substitution in the Hepatitis C Virus Genome: Constraints on the Sequence Change in Coding Regions at Both Ends of the Genome," J. Mol. Evol., Vol.45, pp.238-246, 1997.
    • (1997) J. Mol. Evol. , vol.45 , pp. 238-246
    • Smith, D.B.1    Simmonds, P.2
  • 12
    • 0347634413 scopus 로고    scopus 로고
    • A cis-acting replication element in the sequence encoding the NS5B RNA-dependent RNA polymerase is required for hepatitis C virus RNA replication
    • S. You, D.D. Stump, A.D. Branch, and C.M. Rice, "A cis-Acting Replication Element in the Sequence Encoding the NS5B RNA-Dependent RNA Polymerase Is Required for Hepatitis C Virus RNA Replication," J. Virol., Vol.78, pp. 1352-1366, 2004.
    • (2004) J. Virol. , vol.78 , pp. 1352-1366
    • You, S.1    Stump, D.D.2    Branch, A.D.3    Rice, C.M.4
  • 13
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • M. Zuker, "Mfold Web Server for Nucleic Acid Folding and Hybridization Prediction," Nucleic Acids Res., Vol.31, pp.3406-3415, 2003.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.