Estimating genetic diversity and sampling strategy for a wild soybean (Glycine soja) population based on different molecular markers

Chinese Science Bulletin

Volumn 51, Issue 10, 2006, Pages 1219-1227

  Zhao, Ru ^a   Cheng, Zhou ^b   Lu, Weifeng ^a   Lu, Baorong ^a  

^a FUDAN UNIVERSITY   (China)

^b TONGJI UNIVERSITY   (China)

Author keywords

AFLP; Diversity indices; ISSR; Molecular fingerprinting; Sampling strategy; SSR; Wild soybean

Indexed keywords

GLYCINE MAX; GLYCINE SOJA;

EID: 33748924516     PISSN: 10016538     EISSN: 18619541     Source Type: Journal    
DOI: 10.1007/s11434-006-1219-9     Document Type: Article

References (22)

1. Hou X Y, Gao W D. The conservation and the application of the crops wild relatives. Biology Diversity (in Chinese), 1999, 7(4); 327-331
2. Lu B R. Conserving biodiversity of soybean gene pool in the biotechnology era. Plant Species Biol, 2004, 19: 115-125
3. Jin Y, Lu B R. The sampling strategy of genetic diversity. Biology Diversity (in Chinese), 2003, 11(2): 155-161
4. Wang B S, Peng S L. Vegetation Ecology - Community and the Ecology System (in Chinese). Beijing: Chinese Environment Science Technique Publishing Company, 1997
5. Rieger R, Michaelis A, Geen M M. Glossary of genetics. 5th ed. Berlin: Springer-Verlag, 1991.209
6. Nei M. Analysis of gene diversity in subdivided populations. Proc Natl Acad Sci USA, 1973, 70(12): 3321-3323
7. Wright S. The genetical structure of populations. Ann Eugethcs, 1951, 15: 323-354
8. Nei M. F-statistics and analysis of gene diversity in subdivided populations. Ann Hum Gent Lond, 1977, 41: 225-233
9. McGregor C E, Lamber C A, Greyling M M, et al. A comparative assessment of DNA fingerprinting techniques (RAPD, ISSR, AFLP and SSR) in tetraploid potato (Solanum tuberosum L.). Euphytica, 2000, 113: 135-144
10. Karp A, Seberg O, Buiatti M. Molecular techniques in the assessment of botanical diversity. Ann Bot, 1996, 78: 143-149
11. Murray M G, Thompson W G. Rapid isolator of high molecular weight plant DNA. Nucleic Acids Res, 1980, 8: 4321-4325
12. Raddi S, Sumer S. Genetic diversity in natural Cupreesus sempervirens L. populations in Turkey. Biochem System Ecol, 1999, 27: 799-814
13. Yuan L X, Fu J H, Warburton M, et al. Comparison of genetic diversity among maize inbred lines based on RFLPs, SSRs, AFLPs and RAPD. Acta Genet Sin (in Chinese), 2000, 27(8): 725-733
14. Kiang Y T, Chiang Y C, Kaizuma N. Genetic diversity in natural populations of wild soybean in Iwate prefecture. Jpn J Hered, 1992, 83: 325-329
15. Goulao L, Olivcira C M. Molecular characterization of cultivars of apple (Malus xdomestica Borkh.) using microsatellite (SSR and ISSR) markers. Euphytica, 2001, 122: 81-89
16. Smith J S C, Chin E C L, Shu H, et al. An evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L.): Comparisons with data from RFLPs and pedigree. Theor Appl Genet, 1997, 95: 163-173
17. Talhinhas P, Neves-Martins J, Leitao J. AFLP, ISSR and RAPD markers reveal high levels of genetic diversity among Lupinus spp. Plant Breeding, 2003, 122: 507-510
18. Patzak J. Comparison of RAPD, STS, ISSR and AFLP molecular methods used for assessment of genetic diversity in hop (Humulus lupulus L.). Euphytica, 2001, 121: 9-18
19. Cheng Z, Lu B R, Sameshima K, et al. Identification and genetic relationships of kenaf (Hibiscus cannabinus L.) Genet Rcsour Crop Evol, 2004, 51: 393-401
20. Jin Y, He T H, Lu B R. Fine scale genetic structure in a wild soybean (Glycine soja) population and the implications for conservation. New Phytol, 2003, 159: 513-519
21. Song Z P, Xu X, Wang B, et al. Genetic diversity in the northernmost Oryza rufipogon populations estimated by SSR markers. Theor Appl Genet, 2003, 107: 1492-1499
22. Buza L, Young A, Thrall P. Genetic erosion, inbreeding and reduced fitness in fragmented populations of the endangered tetraploid pea Swainsona recta. Biol Conserv, 2000, 93: 177-186