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Volumn 2, Issue 3, 2006, Pages 325-338

GE-Miner: Integration of cluster ensemble and text mining for comprehensive gene expression analysis

Author keywords

Cluster ensemble; Gene expression analysis; Text mining

Indexed keywords

ALGORITHM; ARTICLE; DATA ANALYSIS; GENE CLUSTER; GENE EXPRESSION; GENE IDENTIFICATION; GENETIC ANALYSIS; INFORMATION SYSTEM; MATHEMATICAL MODEL; NONHUMAN;

EID: 33748805558     PISSN: 17445458     EISSN: 17445493     Source Type: Journal    
DOI: 10.1504/IJBRA.2006.010608     Document Type: Article
Times cited : (1)

References (30)
  • 1
    • 0013376415 scopus 로고    scopus 로고
    • Clustering genome expression data: Design and evaluation principles
    • Berrar, D., Dubitzky, W. and Granzow, M. (Eds.), Springer-Verlag, London
    • Azuaje, F. and Bolshakova, N. (2002) 'Clustering genome expression data: design and evaluation principles', in Berrar, D., Dubitzky, W. and Granzow, M. (Eds.): Understanding and Using Microarray Analysis Techniques: A Practical Guide, Springer-Verlag, London.
    • (2002) Understanding and Using Microarray Analysis Techniques: A Practical Guide
    • Azuaje, F.1    Bolshakova, N.2
  • 2
    • 0032728081 scopus 로고    scopus 로고
    • Clustering gene expression patterns
    • Ben-Dor, A. and Yakhini, Z. (1999) 'Clustering gene expression patterns', Journal of Computational Biology, Vol. 6, Nos. 3/4, pp.281-297.
    • (1999) Journal of Computational Biology , vol.6 , Issue.3-4 , pp. 281-297
    • Ben-Dor, A.1    Yakhini, Z.2
  • 3
    • 0242480974 scopus 로고    scopus 로고
    • Berrar, D., Dubitzky, W. and Granzow, M. (Eds.), Kluwer Academic Publishers, Boston, MA
    • Berrar, D., Dubitzky, W. and Granzow, M. (Eds.) (2002) A Practical Approach to Microarray Data Analysis, Kluwer Academic Publishers, Boston, MA.
    • (2002) A Practical Approach to Microarray Data Analysis
  • 5
    • 0034766349 scopus 로고    scopus 로고
    • Mining functional information associated with expression arrays
    • Blaschke, C., Oliveros, J.C. and Valencia, A. (2001) 'Mining functional information associated with expression arrays', Funct. Integr. Genomics, Vol. 1, No. 4, pp.256-268.
    • (2001) Funct. Integr. Genomics , vol.1 , Issue.4 , pp. 256-268
    • Blaschke, C.1    Oliveros, J.C.2    Valencia, A.3
  • 8
    • 80053403826 scopus 로고    scopus 로고
    • Ensemble methods in machine learning
    • Kittler, J. and Roli, F. (Eds.), LNCS, Springer
    • Dietterich, T.G. (2001) 'Ensemble methods in machine learning', in Kittler, J. and Roli, F. (Eds.): Multiple Classifier Systmes, LNCS, Springer, Vol. 1857, pp.1-15.
    • (2001) Multiple Classifier Systmes , vol.1857 , pp. 1-15
    • Dietterich, T.G.1
  • 10
    • 4544223395 scopus 로고    scopus 로고
    • Using rough sets theory and database operations to construct a good ensemble of classifiers for data mining applications
    • Hu, X. (2001) 'Using rough sets theory and database operations to construct a good ensemble of classifiers for data mining applications', IEEE ICDM, pp.233-240.
    • (2001) IEEE ICDM , pp. 233-240
    • Hu, X.1
  • 11
    • 4544267782 scopus 로고    scopus 로고
    • Scalable learning method to extract biological information from huge online biomedical literature
    • Zhang, Y., Lin, T.Y. and Yao, Y.Y. (Eds.), World Scientific Publisher, in print
    • Hu, X. and Yoo, I. (2004) 'Scalable learning method to extract biological information from huge online biomedical literature', in Zhang, Y., Lin, T.Y. and Yao, Y.Y. (Eds.): Chapter 23 in Computational Web Intelligence: Intelligent Technology for Web Applications, World Scientific Publisher, in print.
    • (2004) Chapter 23 in Computational Web Intelligence: Intelligent Technology for Web Applications
    • Hu, X.1    Yoo, I.2
  • 12
    • 4544274243 scopus 로고    scopus 로고
    • Discovering of cyber communities from the WWW
    • to appear, November 3-6, Dallas, TX
    • Hu, X., Han, J. and Cereone, N. (2003) 'Discovering of cyber communities from the WWW', to appear Proc. of COMPSAC 2003, November 3-6, Dallas, TX, pp.559-594.
    • (2003) Proc. of COMPSAC 2003 , pp. 559-594
    • Hu, X.1    Han, J.2    Cereone, N.3
  • 13
    • 0035229819 scopus 로고    scopus 로고
    • TextQuest: Document clustering of MEDLINE abstract for concept discovery in molecular biology
    • Iliopoulos, I., Enright, A.J. and Ouzounis, C.A. (2001) 'TextQuest: document clustering of MEDLINE abstract for concept discovery in molecular biology', Pacific Symposium of Biocomputing 2001, pp.384-395.
    • (2001) Pacific Symposium of Biocomputing 2001 , pp. 384-395
    • Iliopoulos, I.1    Enright, A.J.2    Ouzounis, C.A.3
  • 14
    • 84893405732 scopus 로고    scopus 로고
    • Data clustering: A review
    • September
    • Jain, K., Murty, M.N. and Flynn, P.J. (1999) 'Data clustering: a review', ACM Computing Surveys, Vol. 31, No. 3, September, pp.264-323.
    • (1999) ACM Computing Surveys , vol.31 , Issue.3 , pp. 264-323
    • Jain, K.1    Murty, M.N.2    Flynn, P.J.3
  • 16
    • 0002806618 scopus 로고    scopus 로고
    • Multilevel k-way partitioning scheme for irregular graphs
    • Kayypis, G. and Kumar, V. (1998) 'Multilevel k-way partitioning scheme for irregular graphs', J. Parallel Distrib. Comput., Vol. 48, No. 1, pp.96-129.
    • (1998) J. Parallel Distrib. Comput. , vol.48 , Issue.1 , pp. 96-129
    • Kayypis, G.1    Kumar, V.2
  • 19
    • 4544348654 scopus 로고    scopus 로고
    • Using the co-occurrence of words for retrieval weighting
    • Mittendorf, E. (2000) 'Using the co-occurrence of words for retrieval weighting', Information Retrieval, Vol. 3, pp.243-251.
    • (2000) Information Retrieval , vol.3 , pp. 243-251
    • Mittendorf, E.1
  • 21
    • 45549117987 scopus 로고
    • Term-weighting approaches in automatic information text retrieval
    • Salton, G. and Buckley, C. (1988) Term-weighting approaches in automatic information text retrieval', Information Process Manage, Vol. 24, No. 5, pp.513-523.
    • (1988) Information Process Manage , vol.24 , Issue.5 , pp. 513-523
    • Salton, G.1    Buckley, C.2
  • 24
    • 0031742022 scopus 로고    scopus 로고
    • Comprehensive identification of cell cycle-regulation genes of the yeast saccharomyces cerevisiae by micorarray hybridizatio
    • Spellman, P.T., Iyer, V.R., Anders, K., Eisen, M.B., Brown, P.O., Botstein, D. and Futcher, B. (1998) 'Comprehensive identification of cell cycle-regulation genes of the yeast saccharomyces cerevisiae by micorarray hybridizatio', Molecular Biology of the Cell, Vol. 9, pp.3273-3297.
    • (1998) Molecular Biology of the Cell , vol.9 , pp. 3273-3297
    • Spellman, P.T.1    Iyer, V.R.2    Anders, K.3    Eisen, M.B.4    Brown, P.O.5    Botstein, D.6    Futcher, B.7
  • 25
    • 0041965980 scopus 로고    scopus 로고
    • Cluster ensembles - A knowledge reuse framework for combining multiple partitions
    • December
    • Strehl, A. and Ghosh, J. (2002) 'Cluster ensembles - a knowledge reuse framework for combining multiple partitions', Journal on Machine Learning Research (JMLR), December, Vol. 3, pp.583-617.
    • (2002) Journal on Machine Learning Research (JMLR) , vol.3 , pp. 583-617
    • Strehl, A.1    Ghosh, J.2
  • 26
    • 0032795144 scopus 로고    scopus 로고
    • MedMiner: An internet text-mining tool for biomedical information, with application to gene expression profiling
    • Tanabe, L., Scherf, U., Smith, L.H., Lee, J.K., Hunter, L. and Weinstein, J.N. (1999) 'MedMiner: an internet text-mining tool for biomedical information, with application to gene expression profiling', Biotechniques, Vol. 27, No. 6, pp.1210-1217.
    • (1999) Biotechniques , vol.27 , Issue.6 , pp. 1210-1217
    • Tanabe, L.1    Scherf, U.2    Smith, L.H.3    Lee, J.K.4    Hunter, L.5    Weinstein, J.N.6
  • 27
    • 13444252181 scopus 로고    scopus 로고
    • An adaptive meta-clustering approach: Combining the information from different clustering results
    • August 14-16, Stanford University
    • Zeng, J.T., Garcia-Frias, J. and Gao, G.R. (2002) 'An adaptive meta-clustering approach: combining the information from different clustering results', CSB2002 IEEE Computer Society Bioinformatics Conference Proceedings, August 14-16, Stanford University, pp.276-287.
    • (2002) CSB2002 IEEE Computer Society Bioinformatics Conference Proceedings , pp. 276-287
    • Zeng, J.T.1    Garcia-Frias, J.2    Gao, G.R.3
  • 28
    • 0036989572 scopus 로고    scopus 로고
    • Generic summaraization and keyphrase extraction using mutual reinforcement principle and sentence clustering
    • ACM, August 11-15, Finland
    • Zha, H. (2002) 'Generic summaraization and keyphrase extraction using mutual reinforcement principle and sentence clustering', ACM SIGIR 2002, ACM, August 11-15, Finland.
    • (2002) ACM SIGIR 2002
    • Zha, H.1
  • 29
    • 0038098924 scopus 로고    scopus 로고
    • Clustering in life science
    • Khodursky, A. and Brownstein, M. (Eds.), Humana Press
    • Zhao, Y. and Karypis, G. (2003) 'Clustering in life science', in Khodursky, A. and Brownstein, M. (Eds.): Functional Genomics, Humana Press, pp. 183-218.
    • (2003) Functional Genomics , pp. 183-218
    • Zhao, Y.1    Karypis, G.2
  • 30
    • 0004177457 scopus 로고
    • Routledge Taylor & Faancis Group, Houghton-Mifflin
    • Zipf, G.K. (1935) Psycho-Biology of Languages, Routledge Taylor & Faancis Group, Houghton-Mifflin.
    • (1935) Psycho-Biology of Languages
    • Zipf, G.K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.