Mathematical evaluation of intermediates accumulation during microbial phenanthrene degradation

Korean Journal of Chemical Engineering

Volumn 23, Issue 3, 2006, Pages 415-418

  Ahn, Chi Kyu ^a   Woo, Seung Han ^b   Lee, Dae Sung ^a   Park, Jong Moon ^a  

^a Pohang University of Science and Technology (POSTECH)   (South Korea)

^b Hanbat National University   (South Korea)

Author keywords

Biodegradation; Intermediate; Membrane Transport; Modeling; Phenanthrene

Indexed keywords

EID: 33748785742     PISSN: 02561115     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02706743     Document Type: Article

References (22)

1. Adachi, K., Iwabuchi, T., Sano, H. and Harayama, S., "Structure of the ring cleavage product of 1-hydroxy-2-naphthoate, an intermediate of the phenanthrene-degradative pathway of Nocardioides sp. strain KP7," J. Bacteriol., 181, 757 (1999).
2. Balashova, N. V., Stolz, A., Knackmuss, H. J., Kosheleva, I. A., Naumov, A. V. and Boronin, A. M., "Purification and characterization of a salicylate hydroxylase involved in 1-hydroxy-2-naphthoic acid hydroxylation from naphthalene and phenanthrene-degrading bacterial strain Pseudomonas putida BS202-P1," Biodegradation, 12, 179 (2001).
3. Barnsley, E. A., "Phthalate pathway of phenanthrene metabolism: Formation of 2'-carboxybenzalpyruvate," J. Bacteriol., 154, 113 (1983).
4. Camenisch, G, Alsenz, J., Van de Waterbeemd, H. and Folkers, G., "Estimation of permeability by passive diffusion through Caco-2 cell monolayers using the drugs' lipophilicity and molecular weight," Eur. J. Pharm. Sci., 6, 313 (1998).
5. Cemiglia, C. E., "Biodegradation of polycyclic aromatic hydrocarbons," Biodegradation, 3, 351 (1992).
6. Cemiglia, C. E. and Yang, S. K., "Stereoselective metabolism of anthracene and phenanthrene by the fungus Cunninghamella elegans" Appl. Environ. Microb., 47, 119 (1984).
7. Cho, D., Youn, S. H. and Rhee, I. H., "Interaction of b-cyclodextrin with lipophilic ring compounds deposited in a sandy soil matrix during flushing," Korean J. Chem. Eng., 21, 389 (2004).
8. Doddamani, H. P. and Ninnekar, H. Z., "Biodegradation of phenanthrene by a Bacillus species" Curr. Microbiol., 41, 11 (2000).
9. Evans, W. C., Fernley, H. N. and Griffiths, E., "Oxidative metabolism of phenanthrene and anthracene by soil pseudomonads: The ring fission mechanism," Biochem. J., 95, 819 (1965).
10. Fuller, E. N., Schettler, P. D. and Giddings, J. C., "A new method for prediction of binary gas-phase diffusion coefficients," Ind. Eng. Chem. Res., 58, 19 (1966).
11. Gaertner, F. H., "Unique catalytic properties of enzyme clusters," Trends. Biochem. Sci., 3, 63 (1978).
12. Hayduk, W. and Laudie, H., "Prediction of diffusion coefficients for non-electrolytes in dilute aqueous solutions," AIChE. J., 20, 611 (1974).
13. Kiyohara, H. and Nagao, K., "The catabolism of phenanthrene and naphthalene by bacteria," J. Gen. Microbiol., 105, 69 (1978).
14. Michael, T. M., John, M. M. and Jack, P., Biology of microorganisms, pp. 6667, 10th ed. Pearson Education, Inc. Upper Saddle River, New Jersey (2003).
15. Moody, J. D., Freeman, J. P., Doerge, D. R. and Cerniglia, C. E., "Degradation of phenanthrene and anthracene by cell suspension of Mycobacterium sp. strain PYR-1," Appl. Environ. Microbiol., 67, 1476 (2001).
16. Prabhu, Y. and Phale, P. S., "Biodegradation of phenanthrene by Pseudomonas sp. Strain PP2: novel metabolic pathway, role of biosurfactant and cell surface hydrophobicity in hydrocarbon assimilation," Appl. Microbiol. Biotechnol., 61, 342 (2003).
17. Samanta, S. K., Chakraborti, A. K. and Jain, R. K., "Degradation of phenanthrene by different bacteria: evidence for novel transformation sequences involving the formation of 1-naphthol," Appl. Microbiol. Biotechnol., 53, 98 (1999).
18. Wang, H. Y., Komolpis, K., Kaufman, P. B., Malakul, P. and Shotipruk, A., "Permeabilization of metabolites from biologically viable soybeans (Glycine max)," Biotechnol. Prog., 17, 424 (2001).
19. Woo, S. H., Jeon, C. O. and Park, J. M., "Phenanthrene biodegradation in soil slurry systems: Influence of salicylate and Triton X-100," Korean J. Chem. Eng., 21, 412 (2004).
20. Woo, S. H., Park, J. M. and Rittmann, B. E., "Evaluation of the interaction between biodegradation and Sorption of phenanthrene in soil-slurry systems," Biotechnol. Bioeng., 73, 12 (2001).
21. Woo, S. H. and Rittmann, B. E., "Microbial energetics and stoichiometry for biodegradation of aromatic compounds involving oxygenation reactions," Biodegradation, 11, 213 (2000).
22. Xiang, T.-X. and Anderson, B. D., "The relationship between permeant size and permeability in lipid bilayer membranes," J. Membrane Biol., 140, 111 (1994).