Mapping of QTLs for physicochemical properties in Japonica rice

Breeding Science

Volumn 56, Issue 3, 2006, Pages 253-260

  Wada, Takuya ^a   Uchimura, Yosuke ^a   Ogata, Takefumi ^a   Tsubone, Masao ^a   Matsue, Yuji ^a  

^a FUKUOKA AGRICULTURAL RESEARCH CENTER   (Japan)

Author keywords

Oryza sativa L.; Physicochemical properties; QTL analysis; SSR marker

Indexed keywords

JAPONICA; ORYZA SATIVA;

EID: 33748782850     PISSN: 13447610     EISSN: 13473735     Source Type: Journal    
DOI: 10.1270/jsbbs.56.253     Document Type: Article

References (19)

1. Asaoka,M., K.Okuno and H.Fuwa (1985) Effect of environmental temperature at the milky stage on amylose content and fine structure of amylopectin of waxy and non waxy endosperm starches of rice (Orysa sativa L.). Agric. Biol. Chem. 49: 373-379.
2. Basten,C.J., B.S.Weir and Z.B.Zeng (1998) QTL CARTOGRAPHER: a reference manual and tutorial for QTL mapping. Department of Statistics, North Carolina State University, Raleigh, N.C.
3. Churchill,G.A. and R.W.Doerge (1994) Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
4. Endo,I., H.Yanase, T.Ishima and S.Chikubu (1980) Texture measurement of a very small amount of cooked rice by texturometer. Part 1. Investigaion of measurement conditions and application to main rice varieties. Report of National Food Research Institute 37: 1-8 (in Japanese with English summary).
5. Higashi,T. and K.Kushibuchi (1976) Studies on breeding for high protein rice II. Inheritance of the high protein property in a Japonica rice cross. Jpn. J. Breed. 26: 17-24 (in Japanese with English summary).
6. Inatsu,O. (1988) Studies on improving the eating quality of Hokkaido rice. Rep. of Hokkaido Prefect. Agric. Exp. Stn. 66: 1-89 (in Japanese with English summary).
7. Ishima,T., H.Taira, H.Taira, K.Mikoshiba and S.Yoshikawa (1974) Effect of nitrogenous fertilizer application and protein content in milled rice on organoleptic of cooked rice. Report of National Food Research Institute 29: 9-15 (in Japanese with English summary).
8. Juliano,B.O. (1971) A simplified assay for milled rice amylose. Cereal Science today 16: 334-338, 340, 360.
9. Kosambi,D.D. (1944) The estimation of map distances from recombination value. Ann. Eugen. 12: 172-175.
10. Lander,E.S., S.P.Green, J.Abrahomson, A.Barlow, M.J.Daly, S.E.Lincoln and L.Newbury (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181.
11. Li,Z., J.Wan, J.Xia and M.Yano (2003) Mapping of quantitative trait loci controlling physico-chemical properties of rice grains (Oriza sativa L.). Breed. Sci. 53: 209-215.
12. Matsue,Y. (1993) The effects of environmental conditions on palatability and physicochemical properties of rice and the evaluation of good eating quality rice varieties. Spec. Bull. Fukuoka Agric. Res. Cent. 6 (in Japanese with English summary).
13. Matsue,Y. (2000) Comparison of physicochemical properties of the grains between old- and new-types of rice cultivars in Japan. Plant Prod. Sci. 3: 145-151.
14. McCouch,S.R., L.Teytelman, Y.Xu, K.B.Lobos, K.Clare, M.Walton, B.Fu, R.Maghirang, Z.Li, Y.Xing, Q.Zhang, I.Kono, M.Yano, R.Fjellstrom, G.DeClerck, D.Schneider, S.Cartinhour, D.Ware and L.Stein (2002) Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.). DNA Res. 9: 199-207.
15. Murray,M.G. and W.F.Thompson (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 8: 4321-4325.
16. Nkonge,C. and G.M.Ballance (1982) A sensitive colorimetric procedure for nitrogen determination in Micro-Kjeldahl digests. J. Agric. Food Chem. 30: 416-420.
17. Ogata,T., A.Yoshimura, Y.Matsue, H.Tsunematsu and N.Iwata (1996) QTL analysis for palatability and physicochemical properties of milled rice. Breed. Sci. 46 (Suppl. 2): 201 (in Japanese).
18. Sano,Y. (1984) Differential regulation of waxy gene expression in rice endosperm. Theor. Appl. Genet. 68: 467-473.
19. Tanaka,I., Y.Takeuchi, M.Yamagishi, M.Yano, T.Sasaki and H.Horiuchi (1998) Analysis of quantitative trait loci controlling eating quality of rice using doubled haploid lines derived from Koshihikari and Akihikari. Breed. Sci. 48 (Suppl. 2): 89 (in Japanese).