Reconstituted Okazaki fragment processing indicates two pathways of primer removal

Journal of Biological Chemistry

Volumn 281, Issue 36, 2006, Pages 26051-26061

  Rossi, Marie L ^a   Bambara, Robert A ^a  

^a UNIVERSITY OF ROCHESTER SCHOOL OF MEDICINE AND DENTISTRY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EUKARYOTIC OKAZAKI FRAGMENTS; PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA); REPLICATION PROTEIN A (RPA);

ANTIGENS; BIOSYNTHESIS; CELLS; ENZYMES; ITERATIVE METHODS; REACTION KINETICS;

DNA;

DNA; OKAZAKI FRAGMENT; RNA;

ARTICLE; CONTROLLED STUDY; DNA CLEAVAGE; DOWNSTREAM PROCESSING; MATERIAL COATING; NONHUMAN; PRIORITY JOURNAL; RNA CLEAVAGE; SACCHAROMYCES CEREVISIAE;

DNA; DNA POLYMERASE III; DNA PRIMERS; DNA REPLICATION; FLAP ENDONUCLEASES; OLIGONUCLEOTIDES; PROLIFERATING CELL NUCLEAR ANTIGEN; RNA; SACCHAROMYCES CEREVISIAE PROTEINS; SALTS;

EUKARYOTA; SACCHAROMYCES CEREVISIAE;

EID: 33748755119     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M604805200     Document Type: Article

References (35)

1. Liu, Y., Kao, H. I., and Bambara, R. A. (2004) Annu. Rev. Biochem. 73, 589-615
2. Rossi, M. L., Purohit, V., Brandt, P. D., and Bambara, R. A. (2006) Chem. Rev. 106, 453-473
3. Ayyagari, R., Gomes, X. V., Gordenin, D. A., and Burgers, P. M. (2003) J. Biol. Chem. 278, 1618-1625
4. Jin, Y. H., Ayyagari, R., Resnick, M. A., Gordenin, D. A., and Burgers, P. M. (2003) J. Biol. Chem. 278, 1626-1633
5. Garg, P., Stith, C. M., Sabouri, N., Johansson, E., and Burgers, P. M. (2004) Genes Dev. 18, 2764-2773
6. Murante, R. S., Rust, L., and Bambara, R. A. (1995) J. Biol. Chem. 270, 30377-30383
7. Tom, S., Henricksen, L. A., and Bambara, R. A. (2000) J. Biol. Chem. 275, 10498-10505
8. Harrington, J. J., and Lieber, M. R. (1994) EMBO J. 13, 1235-1246
9. Harrington, J. J., and Lieber, M. R. (1995) J. Biol. Chem. 270, 4503-4508
10. Kokoska, R. J., Stefanovic, L., Tran, H. T., Resnick, M. A., Gordenin, D. A., and Petes, T. D. (1998) Mol. Cell Biol. 18, 2779-2788
11. Gary, R., Park, M. S., Nolan, J. P., Cornelius, H. L., Kozyreva, O. G., Tran, H. T., Lobachev, K. S., Resnick, M. A., and Gordenin, D. A. (1999) Mol. Cell Biol. 19, 5373-5382
12. Jin, Y. H., Obert, R., Burgers, P. M., Kunkel, T. A., Resnick, M. A., and Gordenin, D. A. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 5122-5127
13. Bae, S. H., Bae, K. H., Kim, J. A., and Seo, Y. S. (2001) Nature 412, 456-461
14. Kao, H. I., Veeraraghavan, J., Polaczek, P., Campbell, J. L., and Bambara, R. A. (2004) J. Biol. Chem. 279, 15014-15024
15. Bae, S. H., and Seo, Y. S. (2000) J. Biol. Chem. 275, 38022-38031
16. Kao, H. I., Campbell, J. L., and Bambara, R. A. (2004) J. Biol. Chem. 279, 50840-50849
17. Budd, M. E., and Campbell, J. L. (1997) Mol. Cell Biol. 17, 2136-2142
18. Budd, M. E., and Campbell, J. L. (2000) Mutat. Res. 459, 173-186
19. Burgers, P. M., and Gerik, K. J. (1998) J. Biol. Chem. 273, 19756-19762
20. Gerik, K. J., Gary, S. L., and Burgers, P. M. (1997) J. Biol. Chem. 272, 1256-1262
21. Kao, H. I., Henricksen, L. A., Liu, Y., and Bambara, R. A. (2002) J. Biol. Chem. 277, 14379-14389
22. Xie, Y., Liu, Y., Argueso, J. L., Henricksen, L. A., Kao, H. I., Bambara, R. A., and Alani, E. (2001) Mol. Cell Biol. 21, 4889-4899
23. Liu, Y., and Bambara, R. A. (2003) J. Biol. Chem. 278, 13728-13739
24. Li, X., Li, J., Harrington, J., Lieber, M. R., and Burgers, P. M. (1995) J. Biol. Chem. 270, 22109-22112
25. Budd, M. E., Choe, W., and Campbell, J. L. (2000) J. Biol. Chem. 275, 16518-16529
26. Lee, K. H., Kim, D. W., Bae, S. H., Kim, J. A., Ryu, G. H., Kwon, Y. N., Kim, K. A., Koo, H. S., and Seo, Y. S. (2000) Nucleic Acids Res. 28, 2873-2881
27. Budd, M. E., Reis, C. C., Smith, S., Myung, K., and Campbell, J. L. (2006) Mol. Cell Biol. 26, 2490-2500
28. Budd, M. E., and Campbell, J. L. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 7642-7646
29. Kelly, R. B., Cozzarelli, N. R., Deutscher, M. P., Lehman, I. R., and Kornberg, A. (1970) J. Biol. Chem. 245, 39-45
30. Kornberg, A., and Baker, T. A. (1992) DNA Replication, 2nd Ed., pp. 113-195, W. H. Freeman, New York
31. Setlow, P., and Kornberg, A. (1972) J. Biol. Chem. 247, 232-240
32. Lyamichev, V., Brow, M. A., and Dahlberg, J. E. (1993) Science 260, 778-783
33. Kaiser, M. W., Lyamicheva, N., Ma, W., Miller, C., Neri, B., Fors, L., and Lyamichev, V. I. (1999) J. Biol. Chem. 274, 21387-21394
34. Xu, Y., Grindley, N. D., and Joyce, C. M. (2000) J. Biol. Chem. 275, 20949-20955
35. Wold, M. S. (1997) Annu. Rev. Biochem. 66, 61-92