Two transsulfurylation pathways in Klebsiella pneumoniae

Journal of Bacteriology

Volumn 188, Issue 16, 2006, Pages 5762-5774

  Seiflein, Thomas A ^a   Lawrence, Jeffrey G ^a  

^a UNIVERSITY OF PITTSBURGH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE 5' PHOSPHOSULFATE; BACTERIAL ENZYME; BACTERIAL PROTEIN; CARBON; CBL PROTEIN; CYSTATHIONINE; CYSTATHIONINE BETA SYNTHASE; CYSTATHIONINE GAMMA LYASE; CYSTATHIONINE GAMMA SYNTHASE; CYSTEINE; HOMOCYSTEINE; HOMOSERINE; INORGANIC COMPOUND; METHIONINE; PROTEIN CYSB; PROTEIN METJ; PROTEIN MTC; SULFIDE; SULFUR; SYNTHETASE; THIOL GROUP; UNCLASSIFIED DRUG; SULFATE;

AMINO ACID SYNTHESIS; ARTICLE; CHEMICAL ANALYSIS; CONTROLLED STUDY; CULTURE MEDIUM; ENTEROBACTERIACEAE; ENZYME ACTIVITY; ESCHERICHIA COLI; GENE EXPRESSION; GENE MUTATION; GENETIC ANALYSIS; KLEBSIELLA; KLEBSIELLA PNEUMONIAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SALMONELLA ENTERICA; SULFATION; YEAST; BIOSYNTHESIS; CHEMISTRY; DRUG EFFECT; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MOLECULAR GENETICS; OPERON; PHYLOGENY; PHYSIOLOGY;

BACTERIA (MICROORGANISMS); ENTEROBACTERIACEAE; ESCHERICHIA COLI; KLEBSIELLA; KLEBSIELLA PNEUMONIAE; SALMONELLA ENTERICA;

BACTERIAL PROTEINS; BASE SEQUENCE; CYSTEINE; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; KLEBSIELLA PNEUMONIAE; METHIONINE; MOLECULAR SEQUENCE DATA; OPERON; PHYLOGENY; SULFATES;

EID: 33748656525     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00347-06     Document Type: Article

References (37)

1. Belfazia, J., C. Parsot, A. Martel, C. Bouthier de la Tour, D. Margarita, G. N. Cohen, and I. Saint-Girons. 1986. Evolution in biosynthetic pathways: two enzymes catalyzing consecutive steps in methionine biosynthesis originate from a common ancestor and possess a similar regulatory region. Proc. Natl. Acad. Sci. USA 83:867-871.
2. Bender, R. A. 1996. Variation on a theme by Escherichia, p. 4-9. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C.
3. Blattner, F. R., G. R. Plunkett, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. W. Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao. 1997. The complete genome sequence of Escherichia coli K-12. Science 277:1453-1474.
4. Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
5. Bykowski, T., J. R. van der Ploeg, R. Iwanicka-Nowicka, and M. M. Hryniewicz. 2002. The switch from inorganic to organic sulphur assimilation in Escherichia coli: adenosine 5′-phosphosulphate (APS) as a signalling molecule for sulphate excess. Mol. Microbiol. 43:1347-1358.
6. Chiu, C. H., P. Tang, C. Chu, S. Hu, Q. Bao, J. Yu, Y. Y. Chou, H. S. Wang, and Y. S. Lee. 2005. The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen. Nucleic Acids Res. 33:1690-1698.
7. Greene, R. C. 1996. Biosynthesis of methionine, p. 542-560. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C.
8. He, Y. Y., P. G. Stockley, and L. Gold. 1996. In vitro evolution of the DNA binding sites of Escherichia coli methionine repressor, MetJ. J. Mol. Biol. 255:55-66.
9. Iwanicka-Nowicka, R., and M. M. Hryniewicz. 1995. A new gene, cbl, encoding a member of the LysR family of transcriptional regulators belongs to Escherichia coli cys regulon. Gene 166:11-17.
10. Kahnert, A., P. Vermeij, C. Wietek, P. James, T. Leisinger, and M. A. Kertesz. 2000. The ssu locus plays a key role in organosulfur metabolism in Pseudomonas putida S-313. J. Bacteriol. 182:2869-2878.
11. Kirby, T. W., B. R. Hindenach, and R. C. Greene. 1986. Regulation of in vivo transcription of the Escherichia coli metJBLF gene cluster. J. Bacteriol. 165:671-677.
12. Kleckner, N., J. Bender, and S. Gottesman. 1991. Uses of transposons with emphasis on TnI0. Methods Enzymol. 204:139-180.
13. Kolko, M. M., L. A. Kapetanovich, and J. G. Lawrence. 2001. Alternative pathways for siroheme synthesis in Klebsiella aerogenes, J. Bacteriol. 183:328-335.
14. Kredich, N. 1996. Biosynthesis of cysteine, p. 514-527. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: Cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C.
15. Lynch, A. S., R. Tyrrell, S. J. Smerdon, G. S. Briggs, and A. J. Wilkinson. 1994. Characterization of the CysB protein of Klebsiella aerogenes: direct evidence that N-acetylserine rather than O-acetylserine serves as the inducer of the cysteine regulon. Biochem. J. 299:129-136.
16. McClelland, M., K. E. Sanderson, J. Spieth, S. W. Clifton, P. Latreille, L. Courtney, S. Porwollik, J. Ali, M. Dante, F. Du, S. Hou, D. Layman, S. Leonard, C. Nguyen, K. Scott, A. Holmes, N. Grewal, E. Mulvaney, E. Ryan, H. Sun, L. Florea, W. Miller, T. Stoneking, M. Nhan, R. Waterston, and R. K. Wilson. 2001. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature 413:852-856.
17. Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
18. Nagasawa, T., H. Kanzaki, and H. Yamada. 1984. Cystathionine gamma-lyase of Streptomyces phaeochromogenes. The occurrence of cystathionine gamma-lyase in filamentous bacteria and its purification and characterization. J. Biol. Chem. 259:10393-10403.
19. Ochman, H., A. S. Gerber, and D. L. Hartl. 1988. Genetic applications of an inverse polymerase chain reaction. Genetics 120:621-623.
20. Ochman, H., J. G. Lawrence, and E. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304.
21. Ostrowski, J., and N. M. Kredich. 1991. Negative autoregulation of cysB in Salmonella typhimurium: in vitro interactions of CysB protein with the cysB promoter. J. Bacteriol. 173:2212-2218.
22. Parkhill, J., G. Dougan, K. D. James, N. R. Thomson, D. Pickard, J. Wain, C. Churcher, K. L. Mungall, S. D. Bentley, M. T. Holden, M. Sebaihia, S. Baker, D. Basham, K. Brooks, T. Chillingworth, P. Connerton, A. Cronin, P. Davis, R. M. Davies, L. Dowd, N. White, J. Farrar, T. Feltwell, N. Hamlin, A. Haque, T. T. Hien, S. Holroyd, K. Jagels, A. Krogh, T. S. Larsen, S. Leather, S. Moule, P. O'Gaora, C. Parry, M. Quail, K. Rutherford, M. Simmonds, J. Skelton, K. Stevens, S. Whitehead, and B. G. Barrell. 2001. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature 413:848-852.
23. Perna, N. T., G. Plunkett, V. Burland, B. Mau, J. D. Glasner, D. J. Rose, G. F. Mayhew, P. S. Evans, J. Gregor, H. A. Kirkpatrick, G. Posfai, J. Hackett, S. Klink, A. Boulin, Y. Shao, L. Miller, E. J. Grotbeck, N. W. Davis, A. Lim, E. T. Dimalanta, K. D. Potamousis, J. Apodaca, T. S. Anantharaman, J. Lin, G. Yen, D. C. Schwartz, R. A. Welch, and F. R. Blattner. 2001. Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 409:529-533.
24. Poteete, A. R., and A. C. Fenton. 2000. Genetic requirements of phage lambda red-mediated gene replacement in Escherichia coli K-12. J. Bacteriol. 182:2336-2340.
25. Schwacha, A., and R. A. Bender. 1993. The nac (nitrogen assimilation control) gene from Klebsiella aerogenes. J. Bacteriol. 175:2107-2115.
26. Seiflein, T. A., and J. G. Lawrence. 2001. Multiple pathways for methionine to cysteine recycling in Klebsiella aerogenes. J. Bacteriol. 183:336-346.
27. Shoeman, R., B. Redfield, T. Coleman, R. Greene, A. Smith, I. Saint-Girons, N. Brot, and H. Weissbach. 1985. Regulation of methionine synthesis in Escherichia coli: effect of the metJ gene product and S-adenosylmethionine on the in vitro expression of the metB, metL, and metJ genes. Biochem. Biophys. Res. Commun. 133:731-739.
28. Smith, A. A., R. C. Greene, T. W. Kirby, and B. R. Hindenach. 1985. Isolation and characterization of the product of the methionine regulatory gene, metJ, of Escherichia coli K12. Proc. Natl. Acad. Sci. USA 82:6104-6108.
29. Somers, W. S., J. B. Rafferty, K. Phillips, S. Strathdee, Y. Y. He, T. McNally, I. Manfield, O. Navratil, I. G. Old, I. Saint-Girons, P. G. Stockley, and S. E. V. Phillips. 1994. The Met repressor-operator complex: DNA recognition by β-strands. Ann. N. Y. Acad. Sci. 726:105-117.
30. Stec, E., M. Witkowska, M. M. Hryniewicz, A. M. Brzozowski, A. J. Wilkinson, and G. D. Bujacz. 2004. Crystallization and preliminary crystallographic studies of the cofactor-binding domain of the LysR-type transcriptional regulator Cbl from Escherichia coli. Acta Crystallogr. D Biol. Crystallogr. 60:1654-1657.
31. Thomas, D., and Y. Surdin-Kerjan. 1997. Metabolism of sulphur amino acids in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 61:503-532.
32. van der Ploeg, J. R., R. Iwanicka-Nowicka, M. A. Kertesz, T. Leisinger, and M. M. Hryniewicz. 1997. Involvement of CysB and Cbl regulatory proteins in expression of the tauABCD operon and other sulfate starvation-inducible genes in Escherichia coli. J. Bacteriol. 179:7671-7678.
33. Vermeij, P., and M. A. Kertesz. 1999. Pathways of assimilative sulfur metabolism in Pseudomonas putida. J. Bacteriol. 181:5833-5837.
34. Vogel, H., and F. Jahnig. 1986. Models for the structure of outer-membrane proteins of Escherichia coli derived from Raman spectroscopy and prediction methods. J. Mol. Biol. 190:191-199.
35. Weissbach, H., and N. Brot. 1991. Regulation of methionine synthesis in Escherichia coli. Mol. Microbiol. 5:1593-1597.
36. Welch, R. A., V. Burland, G. Plunkett III, P. Redford, P. Roesch, D. Rasko, E. L. Buckles, S. R. Liou, A. Boutin, J. Hackett, D. Stroud, G. F. Mayhew, D. J. Rose, S. Zhou, D. C. Schwartz, N. T. Perna, H. L. Mobley, M. S. Donnenberg, and F. R. Blattner. 2002. Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. Proc. Natl. Acad. Sci. USA 99:17020-17024.
37. Wu, W. F., M. L. Urbanowski, and G. V. Stauffer. 1993. MetJ-mediated regulation of the Salmonella typhimurium metE and metR genes occurs through a common operator region. FEMS Microbiol. Lett. 108:145-150.