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Volumn 39, Issue 12, 2006, Pages 2426-2438

Pattern classification in DNA microarray data of multiple tumor types

Author keywords

Cancer classification; Gene expression profiling; Genetic algorithm; Silhouette statistics

Indexed keywords

DATA REDUCTION; DATA STRUCTURES; DNA; GENES; GENETIC ALGORITHMS; PATTERN RECOGNITION;

EID: 33748420317     PISSN: 00313203     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.patcog.2006.01.004     Document Type: Article
Times cited : (39)

References (23)
  • 2
    • 33748423453 scopus 로고    scopus 로고
    • A. Ben-Dor, N. Friedman, Z. Yakhini, Scoring genes for relevance, Technical Report AGL-2000-13 Agilent Laboratories, 2000.
  • 5
    • 0033636139 scopus 로고    scopus 로고
    • Support vector machine classification and validation of cancer tissue samples using microarray expression data
    • Furey T., Cristianini N., Duffy N., Bednarski D., Schummer M., and Haussler D. Support vector machine classification and validation of cancer tissue samples using microarray expression data. Bioinformatics 16 (2000) 906-914
    • (2000) Bioinformatics , vol.16 , pp. 906-914
    • Furey, T.1    Cristianini, N.2    Duffy, N.3    Bednarski, D.4    Schummer, M.5    Haussler, D.6
  • 6
    • 7244248755 scopus 로고    scopus 로고
    • A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression
    • Li T., Zhang C., and Ogihara M. A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression. Bioinformatics 20 (2004) 2429-2437
    • (2004) Bioinformatics , vol.20 , pp. 2429-2437
    • Li, T.1    Zhang, C.2    Ogihara, M.3
  • 7
    • 0037447386 scopus 로고    scopus 로고
    • Pattern recognition in gene expression profiling using DNA array: a comparative study of different statistical methods applied to cancer classification
    • Romualdi C., Campanaro S., Campagna D., Celegato B., Cannata N., Toppo S., Valle G., and Lanfranchi G. Pattern recognition in gene expression profiling using DNA array: a comparative study of different statistical methods applied to cancer classification. Hum. Mol. Genet. 12 8 (2003) 823-836
    • (2003) Hum. Mol. Genet. , vol.12 , Issue.8 , pp. 823-836
    • Romualdi, C.1    Campanaro, S.2    Campagna, D.3    Celegato, B.4    Cannata, N.5    Toppo, S.6    Valle, G.7    Lanfranchi, G.8
  • 8
    • 0034614637 scopus 로고    scopus 로고
    • The hallmark of cancer
    • Hanahan D., and Weinberg R. The hallmark of cancer. Cell 100 (2000) 57-71
    • (2000) Cell , vol.100 , pp. 57-71
    • Hanahan, D.1    Weinberg, R.2
  • 9
    • 0037245772 scopus 로고    scopus 로고
    • Genetic algorithms applied to multi-class prediction for the analysis of gene expression data
    • Ooi C.H., and Tan P. Genetic algorithms applied to multi-class prediction for the analysis of gene expression data. Bioinformatics 19 (2003) 37-44
    • (2003) Bioinformatics , vol.19 , pp. 37-44
    • Ooi, C.H.1    Tan, P.2
  • 10
    • 20744448405 scopus 로고    scopus 로고
    • Multiclass cancer classification and biomarker discovery using GA-based algorithms
    • Liu J.J., Cutler G., Li W., Pan Z., Peng S., Hoey T., Chen L., and Ling X.B. Multiclass cancer classification and biomarker discovery using GA-based algorithms. Bioinformatics 21 (2005) 2691-2697
    • (2005) Bioinformatics , vol.21 , pp. 2691-2697
    • Liu, J.J.1    Cutler, G.2    Li, W.3    Pan, Z.4    Peng, S.5    Hoey, T.6    Chen, L.7    Ling, X.B.8
  • 11
    • 0037255041 scopus 로고    scopus 로고
    • Evolution algorithms for finding optimal gene sets in microarray prediction
    • Deutsch J.M. Evolution algorithms for finding optimal gene sets in microarray prediction. Bioinformatics 19 (2003) 45-52
    • (2003) Bioinformatics , vol.19 , pp. 45-52
    • Deutsch, J.M.1
  • 13
    • 0036489046 scopus 로고    scopus 로고
    • Comparison of discrimination methods for the classification of tumors using gene expression data
    • Dudoit S., Fridly J., and Speed T.P. Comparison of discrimination methods for the classification of tumors using gene expression data. J. Am. Stat. Assoc. 97 (2002) 77-87
    • (2002) J. Am. Stat. Assoc. , vol.97 , pp. 77-87
    • Dudoit, S.1    Fridly, J.2    Speed, T.P.3
  • 14
    • 0036139278 scopus 로고    scopus 로고
    • Gene selection for sample classification based on gene expression data: study of sensitivity to choice of parameters of the GA/KNN method
    • Li L., Weinberg C.R., Darden T.A., and Pedersen L.G. Gene selection for sample classification based on gene expression data: study of sensitivity to choice of parameters of the GA/KNN method. Bioinformatics 17 (2001) 1131-1142
    • (2001) Bioinformatics , vol.17 , pp. 1131-1142
    • Li, L.1    Weinberg, C.R.2    Darden, T.A.3    Pedersen, L.G.4
  • 15
    • 33749362808 scopus 로고    scopus 로고
    • T.K. Paul, H. Iba, Identification of Informative Genes for Molecular Classification Using Probabilistic Model Building Genetic Algorithms, GECCO, vol. 3102, Springer, Seattle, 2004, pp. 414-425.
  • 19
    • 0347201147 scopus 로고    scopus 로고
    • S. Ramaswamy, P. Tamayo, R. Rifkin, S. Mukherjee, C.H. Yeang, M. Angelo, C. Ladd, M. Reich, E. Latulippe, J.P. Mesirov, et al., Multi-class cancer diagnosis using tumor gene expression signature, PNAS, 98, 15149-15154.
  • 22
    • 15844413351 scopus 로고    scopus 로고
    • A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
    • Statnikov A., Aliferis C.F., Tsamardinos I., Hardin D., and Levy S. A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis. Bioinformatics 21 (2005) 631-643
    • (2005) Bioinformatics , vol.21 , pp. 631-643
    • Statnikov, A.1    Aliferis, C.F.2    Tsamardinos, I.3    Hardin, D.4    Levy, S.5
  • 23
    • 0038729565 scopus 로고    scopus 로고
    • Classification of multiple cancer types by multicategory support vector machines using gene expression data
    • Lee Y., and Lee C.K. Classification of multiple cancer types by multicategory support vector machines using gene expression data. Bioinformatics 19 (2003) 1132-1139
    • (2003) Bioinformatics , vol.19 , pp. 1132-1139
    • Lee, Y.1    Lee, C.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.