A new approach to non-destructive analysis of biofilms by confocal Raman microscopy

Analytical and Bioanalytical Chemistry

Volumn 386, Issue 2, 2006, Pages 286-292

  Pätzold, Ralf ^a   Keuntje, Maike ^a   Anders Von Ahlften, Angelika ^a  

^a LEIBNIZ UNIVERSITY HANNOVER   (Germany)

Author keywords

Biofilm; Confocal Raman microscopy; Microbial communities

Indexed keywords

BIOLOGICAL WATER TREATMENT; MICROORGANISMS; NITROGEN REMOVAL; WASTEWATER TREATMENT; BACTERIA; MICROSCOPIC EXAMINATION; MOLECULAR VIBRATIONS; RAMAN SPECTROSCOPY; SAMPLING;

BIOLOGICAL WASTE WATER TREATMENT; CONFOCAL RAMAN MICROSCOPY; FLUORESCENT IN SITU HYBRIDIZATION; INVASIVE TECHNIQUES; MICROBIAL COMMUNITIES; NON-DESTRUCTIVE ANALYSIS; PRETREATMENT PROCESS; VIBRATIONAL SIGNATURE;

BIOFILMS;

ANAEROBICALLY AMMONIUM-OXIDIZING (ANAMMOX) BACTERIA; CONFOCAL RAMAN MICROSCOPY (CRM); FLUORESCENT IN SITU HYBRIDIZATION (FISH); MICROBIAL COMMUNITIES;

QUATERNARY AMMONIUM DERIVATIVE;

ANAEROBIC GROWTH; ARTICLE; BACTERIUM; BIOFILM; CONFOCAL MICROSCOPY; FLUORESCENCE IN SITU HYBRIDIZATION; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; METABOLISM; METHODOLOGY; MICROBIOLOGY; OXIDATION REDUCTION REACTION; RAMAN SPECTROMETRY; SENSITIVITY AND SPECIFICITY; SEWAGE; TIME;

ANAEROBIOSIS; BACTERIA; BIOFILMS; IN SITU HYBRIDIZATION, FLUORESCENCE; MICROSCOPY, CONFOCAL; OXIDATION-REDUCTION; QUATERNARY AMMONIUM COMPOUNDS; SENSITIVITY AND SPECIFICITY; SEWAGE; SPECTRUM ANALYSIS, RAMAN; TIME FACTORS; WASTE DISPOSAL, FLUID; WATER MICROBIOLOGY;

BACTERIA (MICROORGANISMS);

EID: 33748336295     PISSN: 16182642     EISSN: 16182650     Source Type: Journal    
DOI: 10.1007/s00216-006-0663-3     Document Type: Article

References (31)

1. Helm D, Labischinski H, Schallehn G, Naumann D (1991) J Gen Microbiol 137:69-79
2. Naumann D, Keller S, Helm D, Schultz C, Schrader B (1999) J Mol Struct 347:399-406
3. Naumann D (2002) In: Meyers RA (ed) Encyclopaedia of analytical chemistry. Wiley, Chichester, pp 102-131
4. Maquelin K, Kirschner C, Choo-Smith LP, van den Braak N, Endtz HP, Naumann D, Puppels GJ (2002) J Microbiol Meth 51:255-271
5. Maquelin K, Kirschner C, Choo-Smith LP, Ngo-Thi NA, van Vreeswijk T, Stämmler M, Endtz HP, Bruining HA, Naumann D, Puppels GJ (2003) J Clin Microbiol 41:324-329
6. Chan JW, Esposito AP, Talley CE, Hollars CW, Lane SM, Huser T (2004) Anal Chem 76:599-603
7. Rösch P, Harz M, Schmitt M, Peschke KD, Ronneberger O, Burkhardt H, Motzkus HW, Lankers M, Hofer S, Thiele H, Popp J (2005) Appl Environ Microbiol 71:1626-1637
8. Rösch P, Harz M, Schmitt M, Popp J (2005) J Raman Spectrosc 36:377-379
9. Schuster KC, Urlaub E, Gapes JR (2000) J Microbiol Meth 42:29-38
10. Puppels GJ, de Mul FFM, Otto C, Greve J, Robert-Nicoud M, Arndt-Jovin DJ, Jovin TM (1990) Nature 347:301-303
11. Jetten MSM, Cirpus I, Kartal B, van Niftrik L, van de Pas- Schoonen KT, Sliekers O, Haaijer S, van der Star W, Schmid M, van de Vossenberg J, Schmidt I, Harhangi H, van Loosdrecht M, Gijs Kuenen J, Op den Camp H, Strous M (2004) Biochem Soc Trans 33:119-123
12. Strous M, Fuerst JA, Kramer EHM, Logemann S, Muyzer G, van de Pas-Schoonen KT, Webb R, Kuenen, JG, Jetten MSM (1999) Nature 400:446-449
13. Tantra R, McCabe A, Bailey M, Knight A, Smith E (2004) NPL Report DQL-AS 012
14. Amann R (1999) Book review: wasterwater microbiology. Environ Microbiol 1:555-556
15. Dabert P, Delgenès JP, Moletta R, Godon JJ (2002) Rev Environ Sci Biotechnol 1:39-49
16. Pace NR (2000) Environ Microbiol 2:7-8
17. Goodacre R, Timmins, ÉM, Burton R, Kaderbhai N,Woodward AM, Kell DB, Rooney PJ (1998) Microbiology 144:1157-1170
18. Fuerst JA (2004) WFCC Newsl 38:1-11
19. Seyfried CF, Hippen A, Helmer C, Kunst S, Rosenwinkel KH (2001) Water Sci Technol 1:71-80
20. Egli K, Fanger U, Alvarez PJJ, Siegrist H, van der Meer JR, Zehnder AJB (2001) Arch Microbiol 175:198-207
21. Jetten MSM, Schmid M, Schmidt I,Wubben M, van Dongen U, Abma W, Sliekers O, Revsbech NP, Beaumont HJE, Ottosen L, Volcke E, Laanbroek HJ, Campos-Gomez JL, Cole J, van Loosdrecht M, Mulder JW, Fuerst J, Richardson D, van de Pas K, Mendez-Pampin R, Third K, Cirpus I, van Spanning R, Bollmann A, Nielsen LP, Op den Camp H, Schultz C, Gundersen J, Vanrolleghem P, Strous M, Wagner M, Kuenen JG (2002) Rev Environ Sci Biotechnol 1:51-63
22. Gaul T, Wesoly I, Weinobst N, Kunst S (2006) Water Environ Manage Series No 12:409-418
23. Strous M, Pelletier E, Mangenot S, Rattei T, Lehner A, Taylor MW, Horn M, Daims H, Bartol-Mavel D, Wincker P, Barbe V, Fonknechten N, Vallenet D, Segurens B, Schenowitz Truong C, Médigue C, Collingo A, Snel B, Dutilh BE, Op den Camp HJM, van der Drift C, Cirpus I, van de Pas-Schonen, KT, Harhangi HR, van Niftrik L, Schmid M, Keltjens J, van de Vossenberg J, Kartal B, Meier H, Frishman D, Huynen MA, Mewes HW, Weissenbach J, Jetten MSM, Wagner M, Le Paslier D (2006) Nature 440:790-794
24. Schmidt I, Bock E (1997) Arch Microbiol 167:106-111
25. Bock E, Sundermeyer-Klinger H, Stackebrandt E (1983) Arch Microbiol 136:181-184
26. Schrader B, Dippel B, Erb I, Keller S, Löchte T, Schulz H, Tatsch E, Wessel S (1999) J Mol Struct 480-481:21-32
27. Third KA, Sliekers AO, Kuenen JG, Jetten MSM (2001) Appl Microbiol 24:588-596
28. Edwards HGM, Villar SEJ, Parnell J, Cockell CS, Lee P (2005) Analyst 130:917-923
29. Damsté JSS, Strous M, Rijpstra WIC, Hopmans EC, Geenevasen JAJ, van Duin ACT, van Niftrik LA, Jetten MSM (2002) Nature 419:708-712
30. Harz M, Rösch P, Peschke KD, Ronneberger O, Burkhardt H, Popp J (2005) Analyst 130:1543-1550
31. Xie C, Goodman C, Dinno MA, Li YQ (2004) Opt Express 12:6208-6214