Structural and biochemical characterization of a human adenovirus 2/12 penton base chimera

FEBS Journal

Volumn 273, Issue 18, 2006, Pages 4336-4345

  Zubieta, Chloe ^a,c,d   Blanchoin, Laurent ^b   Cusack, Stephen ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (France)

^b Laboratoire de Physiologie Cellulaire Vegetale Grenoble   (France)

^c SLAC NATIONAL ACCELERATOR LABORATORY   (United States)

^d SLAC NATIONAL ACCELERATOR LABORATORY   (United States)

Author keywords

Adenovirus; Crystal structure; Fiber; Fluorescence anisotropy; Penton

Indexed keywords

ADENOVIRUS 12; ADENOVIRUS 2; ANISOTROPY; ARTICLE; CHIMERA; CONFORMATIONAL TRANSITION; CRYSTAL STRUCTURE; FLUORESCENCE; HUMAN; PRIORITY JOURNAL; PROTEIN BINDING;

ADENOVIRUSES, HUMAN; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ANIMALS; CAPSID PROTEINS; CELL LINE; CRYSTALLOGRAPHY, X-RAY; FLUORESCENCE POLARIZATION; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT FUSION PROTEINS; SEQUENCE ALIGNMENT;

ADENOVIRIDAE; HUMAN ADENOVIRUS; HUMAN ADENOVIRUS TYPE 2; MIRIDAE;

EID: 33748317816     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2006.05430.x     Document Type: Article

References (42)

1. Hierholzer JC (1992) Adenoviruses in the immunocompromised host. Clin Microbiol Rev 5, 262-274.
2. Kojaoghlanian T, Flomenberg P & Horwitz MS (2003) The impact of adenovirus infection on the immunocompromised host. Rev Med Virol 13, 155-171.
3. McConnell MJ & Imperiale MJ (2004) Biology of adenovirus and its use as a vector for gene therapy. Hum Gene Ther 15, 1022-1033.
4. Danthinne X & Imperiale MJ (2000) Production of first generation adenovirus vectors: a review. Gene Ther 7, 1707-1714.
5. Amalfitano A & Parks RJ (2002) Separating fact from fiction: assessing the potential of modified adenovirus vectors for use in human gene therapy. Curr Gene Ther 2, 111-133.
6. Furcinitti PS, van Oostrum J & Burnett RM (1989) Adenovirus polypeptide IX revealed as capsid cement by difference images from electron microscopy and crystallography. EMBO J 8, 3563-3570.
7. Stewart PL, Burnett RM, Cyrklaff M & Fuller SD (1991) Image reconstruction reveals the complex molecular organization of adenovirus. Cell 67, 145-154.
8. Stewart PL, Fuller SD & Burnett RM (1993) Difference imaging of adenovirus: bridging the resolution gap between X-ray crystallography and electron microscopy. EMBO J 12, 2589-2599.
9. Stewart PL & Burnett RM (1995) Adenovirus structure by X-ray crystallography and electron microscopy. Curr Top Microbiol Immunol 199, 25-38.
10. Fabry CM, Rosa-Calatrava M, Conway JF, Zubieta C, Cusack S, Ruigrok RW & Schoehn G (2005) A quasiatomic model of human adenovirus type 5 capsid. EMBO J 24, 1645-1654.
11. Saban SD, Nepomuceno RR, Gritton LD, Nemerow GR & Stewart PL (2005) CryoEM structure at 9A resolution of an adenovirus vector targeted to hematopoietic cells. J Mol Biol 349, 526-537.
12. Cohen CJ, Shieh JT, Pickles RJ, Okegawa T, Hsieh JT & Bergelson JM (2001) The coxsackievirus and adenovirus receptor is a transmembrane component of the tight junction. Proc Natl Acad Sci USA 98, 15191-15196.
13. Wickham TJ, Mathias P, Cheresh DA & Nemerow GR (1993) Integrins alpha v beta 3 and alpha v beta 5 promote adenovirus internalization but not virus attachment. Cell 73, 309-319.
14. Li E, Stupack D, Bokoch GM & Nemerow GR (1998) Adenovirus endocytosis requires actin cytoskeleton reorganization mediated by Rho family GTPases. J Virol 72, 8806-8812.
15. Li E, Brown SL, Stupack DG, Puente XS, Cheresh DA & Nemerow GR (2001) Integrin alpha(v)beta1 is an adenovirus coreceptor. J Virol 75, 5405-5409.
16. Chiu CY, Mathias P, Nemerow GR & Stewart PL (1999) Structure of adenovirus complexed with its internalization receptor, alphavbeta5 integrin. J Virol 73, 6759-6768.
17. Greber UF, Willetts M, Webster P & Helenius A (1993) Stepwise dismantling of adenovirus 2 during entry into cells. Cell 75, 477-486.
18. Medina-Kauwe LK (2003) Endocytosis of adenovirus and adenovirus capsid proteins. Adv Drug Deliv Rev 55, 1485-1496.
19. Nakano MY, Boucke K, Suomalainen M, Stidwill RP & Greber UF (2000) The first step of adenovirus type 2 disassembly occurs at the cell surface, independently of endocytosis and escape to the cytosol. J Virol 74, 7085-7095.
20. Zubieta C, Schoehn G, Chroboczek J & Cusack S (2005) The structure of the human adenovirus 2 penton. Mol Cell 17, 121-135.
21. Stewart PL, Chiu CY, Huang S, Muir T, Zhao Y, Chait B, Mathias P & Nemerow GR (1997) Cryo-EM visualization of an exposed RGD epitope on adenovirus that escapes antibody neutralization. EMBO J 16, 1189-1198.
22. Fuschiotti P, Schoehn G, Fender P, Fabry CM, Hewat EA, Chroboczek J, Ruigrok RW & Conway JF (2006) Structure of the dodecahedral penton particle from human adenovirus type 3. J Mol Biol 356, 510-520.
23. Chen XS, Garcea RL, Goldberg I, Casini G & Harrison SC (2000) Structure of small virus-like particles assembled from the L1 protein of human papillomavirus 16. Mol Cell 5, 557-567.
24. Chroboczek J, Gout E, Favier AL & Galinier R (2003) Novel partner proteins of adenovirus penton. Curr Top Microbiol Immunol 272, 37-55.
25. Galinier R, Gout E, Lortat-Jacob H, Wood J & Chroboczek J (2002) Adenovirus protein involved in virus internalization recruits ubiquitin-protein ligases. Biochemistry 41, 14299-14305.
26. Chelvanayagam G, Heringa J & Argos P (1992) Anatomy and evolution of proteins displaying the viral capsid jellyroll topology. J Mol Biol 228, 220-242.
27. Anand K, Pal D & Hilgenfeld R (2002) An overview on 2-methyl-2,4-pentanediol in crystallization and in crystals of biological macromolecules. Acta Crystallogr D Biol Crystallogr 58, 1722-1728.
28. Guthe S, Kapinos L, Moglich A, Meier S, Grzesiek S & Kiefhaber T (2004) Very fast folding and association of a trimerization domain from bacteriophage T4 fibritin. J Mol Biol 337, 905-915.
29. Papanikolopoulou K, Forge V, Goeltz P & Mitraki A (2004) Formation of highly stable chimeric trimers by fusion of an adenovirus fiber shaft fragment with the foldon domain of bacteriophage t4 fibritin. J Biol Chem 279, 8991-8998.
30. Green M & Pina M (1963) Biochemical studies on adenovirus multiplication. IV. Isolation, purification, and chemical analysis of adenovirus. Virology 20, 199-207.
31. Pettersson U, Philipson L & Hoglund S (1968) Structural proteins of adenoviruses. II. Purification and characterization of the adenovirus type 2 fiber antigen. Virology 35, 204-215.
32. Boudin ML, Moncany M, D'Halluin JC & Boulanger PA (1979) Isolation and characterization of adenovirus type 2 vertex capsomer (penton base). Virology 92, 125-138.
33. Pettersson U & Hoglund S (1969) Sructural proteins of adenoviruses. 3. Purification and characterization of the adenovirus type 2 penton antigen. Virology 39, 90-106.
34. Boudin ML & Boulanger P (1981) Antibody-triggered dissociation of adenovirus penton capsomer. Virology 113, 781-786.
35. Von Seggern DJ, Chiu CY, Fleck SK, Stewart PL & Nemerow GR (1999) A helper-independent adenovirus vector with E1, E3, and fiber deleted: structure and infectivity of fiberless particles. J Virol 73, 1601-1608.
36. Perrakis A, Cipriani F, Castagna JC, Claustre L, Burghammer M, Riekel C & Cusack S (1999) Protein microcrystals and the design of a microdiffractometer: current experience and plans at EMBL and ESRF/ ID13. Acta Crystallogr D Biol Crystallogr 55, 1765-1770.
37. Leslie AGW (1992) Recent changes to the MOSFLM package for processing film and image plate data. Joint CCP4 + ESF-EAMCB Newsl Protein Crystallogr 26.
38. Vagin A & Teplyakov A (2000) An approach to multicopy search in molecular replacement. Acta Crystallogr D Biol Crystallogr 56, 1622-1624.
39. Kleywegt GJ & Jones TA (1999) Software for handling macromolecular envelopes. Acta Crystallogr D Biol Crystallogr 55, 941-944.
40. Jones TA, Zou JY, Cowan SW & Kjeldgaard M (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr A 47, 110-119.
41. Laskowski RA, MacArthur MW, Moss DS & Thornton JM (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J Appl Crystallogr 26, 283-291.
42. DeLano WL (2002) The PyMOL Molecular Graphics System. DeLano Scientific, San Carlos, CA.