Structural studies on orbivirus proteins and particles

Current Topics in Microbiology and Immunology

Volumn 309, Issue , 2006, Pages 221-244

  Stuart, D I ^a   Grimes, J M ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; CORE PROTEIN; DOUBLE STRANDED RNA; MESSENGER RNA; PROTEIN VP2; PROTEIN VP3; PROTEIN VP5; PROTEIN VP7; RNA DIRECTED RNA POLYMERASE; RNA HELICASE; UNCLASSIFIED DRUG; VIRUS ENZYME; VIRUS PROTEIN;

AMINO TERMINAL SEQUENCE; BLUETONGUE ORBIVIRUS; CYTOPLASM; ELECTRON MICROSCOPY; GENE TRANSLOCATION; GENETIC TRANSCRIPTION; GENOME ANALYSIS; HUMAN; LIFE CYCLE; NONHUMAN; ORBIVIRUS; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN DOMAIN; PROTEIN STRUCTURE; REOVIRUS; REVIEW; VIRUS ASSEMBLY; VIRUS CAPSID; VIRUS CORE; VIRUS GENOME; VIRUS MORPHOGENESIS; VIRUS MORPHOLOGY; VIRUS PARTICLE; VIRUS STRAIN; VIRUS TRANSCRIPTION; X RAY; CHEMISTRY; GENETICS; TRANSPORT AT THE CELLULAR LEVEL; ULTRASTRUCTURE; VIRION;

BLUETONGUE VIRUS; MIRIDAE; ORBIVIRUS; REOVIRIDAE;

BIOLOGICAL TRANSPORT; CAPSID PROTEINS; GENOME, VIRAL; ORBIVIRUS; TRANSCRIPTION, GENETIC; VIRAL CORE PROTEINS; VIRAL NONSTRUCTURAL PROTEINS; VIRAL PROTEINS; VIRION;

EID: 33748113981     PISSN: 0070217X     EISSN: None     Source Type: Book Series    
DOI: 10.1007/3-540-30773-7_8     Document Type: Review

References (70)

1. Abrescia NG, Cockburn JJ, Grimes JM, Sutton GC, Diprose JM, Butcher SJ, Fuller SD, San Martin C, Burnett RM, Stuart DI, Bamford DH, Bamford JK (2004) Insights into assembly from structural analysis of bacteriophage PRD1. Nature 432:68-74
2. Bamford DH, Burnett RM, Stuart DI (2002) Evolution of viral structure. Theor Popul Biol 61:461-470
3. Bamford DH, Grimes JM, Stuart DI (2005) What does structure tell us about virus evolution? Curr Op Struct Biol 15:1-9
4. Bartlett NM, Gillies SC, Bullivant S, Bellamy AR (1974) Electron microscopy study of reovirus reaction cores. J Virol 14:315-326
5. Basak AK, Gouet P, Grimes J, Roy P, Stuart D (1996) Crystal structure of the top domain of African horse sickness virus VP7: comparisons with bluetongue virus VP7. J Virol 70:3797-3806
6. Basak AK, Grimes JM, Gouet P, Roy P, Stuart DI (1997) Structures of orbivirus VP7: implications for the role of this protein in the viral life cycle. Structure 5:871-883
7. Bergeron J, Mabrouk T, Garzon S, Lemay G (1998) Characterization of the thermosensitive ts453 reovirus mutant: increased dsRNA binding of sigma 3 protein correlates with interferon resistance. Virology 246:199-210
8. Brookes SM, Hyatt AD, Eaton BT (1993) Characterization of virus inclusion bodies in bluetongue virus-infected cells. J Gen Virol 74:525-530
9. Burroughs JN, O'Hara RS, Smale CJ, Hamblin C, Walton A, Armstrong R, Mertens PP (1994) Purification and properties of virus particles, infectious subviral particles, cores and VP7 crystals of African horsesickness virus serotype 9. J Gen Virol 75:1849-1857
10. Butan C, Van Der Zandt H, Tucker PA (2004) Structure and assembly of the RNA binding domain of bluetongue virus non-structural protein 2. J Biol Chem 279:37613-37621
11. Butcher SJ, Grimes JM, Makeyev EV, Bamford DH, Stuart DI (2001) A mechanism for initiating RNA-dependent RNA polymerization. Nature 410:235-240
12. Caspar DLD, Klug A (1962) Physical principles in the construction of regular viruses. Cold Spring Harbor Symp Quant Biol 27:1-24
13. Chiu W, Burnett R, Garcea RE (1997) Structural biology of viruses. Oxford University Press, New York
14. Cleveland DR, Zarbl H, Millward S (1986) Reovirus guanylyltransferase is L2 gene product lambda 2. J Virol 60:307-311
15. Cockburn JJ, Abrescia NG, Grimes JM, Sutton GC, Diprose JM, Benevides JM, Thomas GJ Jr, Bamford JK, Bamford DH, Stuart DI (2004) Membrane structure and interactions with protein and DNA in bacteriophage PRD1. Nature 432:122-125
16. Diprose JM, Burroughs JN, Sutton GC, Goldsmith A, Gouet P, Malby R, Overton I, Zientara S, Mertens PP, Stuart DI, Grimes JM (2001) Translocation portals for the substrates and products of a viral transcription complex: the bluetongue virus core. EMBO J 20:7229-7239
17. Diprose JM, Grimes JM, Sutton GC, Burroughs JN, Meyer A, Maan S, Mertens PP, Stuart DI (2002) The core of bluetongue virus binds double-stranded RNA. J Virol 76:9533-9536
18. Dormitzer PR, Sun ZY, Wagner G, Harrison SC (2002) The rhesus rotavirus VP4 sialic acid binding domain has a galectin fold with a novel carbohydrate binding site. EMBO J 21:885-897
19. Dormitzer PR, Nason EB, Prasad BV, Harrison SC (2004) Structural rearrangements in the membrane penetration protein of a non-enveloped virus. Nature 430:1053-1058
20. Eaton BT, Hyatt AD, Brookes SM (1990) The replication of bluetongue virus. Curr Top Microbiol Immunol 162:89-118
21. Fausnaugh J, Shatkin AJ (1990) Active site localization in a viral mRNA capping enzyme. J Biol Chem 265:7669-7672
22. French TJ, Roy P (1990) Synthesis of bluetongue virus (BTV) corelike particles by a recombinant baculovirus expressing the two major structural core proteins of BTV. J Virol 64:1530-1536
23. Gillies S, Bullivant S, Bellamy AR (1971) Viral RNA polymerases: electron microscopy of reovirus reaction cores. Science 174:694-696
24. Gouet P, Diprose JM, Grimes JM, Malby R, Burroughs JN, Zientara S, Stuart DI, Mertens PP (1999) The highly ordered double-stranded RNA genome of bluetongue virus revealed by crystallography. Cell 97:481-490
25. Grimes J, Basak AK, Roy P, Stuart D (1995) The crystal structure of bluetongue virus VP7. Nature 373:167-170
26. Grimes JM, Burroughs JN, Gouet P, Diprose JM, Malby R, Zientara S, Mertens PP, Stuart DI (1998) The atomic structure of the bluetongue virus core. Nature 395:470-478
27. Handa N, Nureki O, Kurimoto K, Kim I, Sakamoto H, Shimura Y, Muto Y, Yokoyama S (1999) Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein. Nature 398:579-585
28. Harrison SC, Olson AJ, Schutt CE, Winkler FK, Bricogne G (1978) Tomato bushy stunt virus at 2.9 Å resolution. Nature 276:368-373
29. Hassan SH, Wirblich C, Forzan M, Roy P (2001) Expression and functional characterization of bluetongue virus VP5 protein: role in cellular permeabilization. J Virol 75:8356-8367
30. Hassan SS, Roy P (1999) Expression and functional characterization of bluetongue virus VP2 protein: role in cell entry. J Virol 73:9832-9842
31. Hewat EA, Booth TF, Loudon PT, Roy P (1992a) Three-dimensional reconstruction of baculovirus expressed bluetongue virus core-like particles by cryo-electron microscopy. Virology 189:10-20
32. Hewat EA, Booth TF, Roy P (1992b) Structure of bluetongue virus particles by cryo-electron microscopy. J Struct Biol 109:61-69
33. Hill CL, Booth TF, Prasad BV, Grimes JM, Mertens PP, Sutton GC, Stuart DI (1999) The structure of a cypovirus and the functional organization of dsRNA viruses. Nat Struct Biol 6:565-568
34. Huismans H, van Dijk AA, Els HJ (1987) Uncoating of parental bluetongue virus to core and subcore particles in infected L cells. Virology 157:180-188
35. Jacobs BL, Langland JO (1998) Reovirus sigma 3 protein: dsRNA binding and inhibition of RNA-activated protein kinase. Curr Top Microbiol Immunol 233:185-196
36. Johnson JE, Speir JA (1997) Quasi-equivalent viruses: a paradigm for protein assemblies. J Mol Biol 269:665-675
37. Kapahnke R, Rappold W, Desselberger U, Riesner D (1986) The stiffness of dsRNA: hydrodynamic studies on fluorescence-labelled RNA segments of bovine rotavirus. Nucleic Acids Res 14:3215-3228
38. Kar AK, Ghosh M, Roy P (2004) Mapping the assembly pathway of bluetongue virus scaffolding protein VP3. Virology 324:387-399
39. Lawton JA, Estes MK, Prasad BV (1997) Three-dimensional visualization of mRNA release from actively transcribing rotavirus particles. Nat Struct Biol 4:118-121
40. Liemann S, Chandran K, Baker TS, Nibert ML, Harrison SC (2002) Structure of the reovirus membrane-penetration protein, Mu1, in a complex with is protector protein, Sigma3. Cell 108:283-295
41. Loudon PT, Roy P (1991) Assembly of five bluetongue virus proteins expressed by recombinant baculoviruses: inclusion of the largest protein VP1 in the core and virus-like proteins. Virology 180:798-802
42. Loudon PT, Roy P (1992) Interaction of nucleic acids with core-like and subcore-like particles of bluetongue virus. Virology 191:231-236
43. Lu G, Zhou ZH, Baker ML, Jakana J, Cai D, Wei X, Chen S, Gu X, Chiu W (1998) Structure of double-shelled rice dwarf virus. J Virol 72:8541-8549
44. Martinez-Costas J, Gonzalez-Lopez C, Vakharia VN, Benavente J (2000) Possible involvement of the double-stranded RNA-binding core protein sigmaA in the resistance of avian reovirus to interferon. J Virol 74:1124-1131
45. Mathieu M, Petitpas I, Navaza J, Lepault J, Kohli E, Pothier P, Prasad BV, Cohen J, Rey FA (2001) Atomic structure of the major capsid protein of rotavirus: implications for the architecture of the virion. EMBO J 20:1485-1497
46. Mertens PPC (2000) Orbiviruses and coltiviruses - general features. In: Webster RG, Granoff A (eds) Encyclopedia of virology. Academic Press, London
47. Mertens PPC, Burroughs JN, Anderson J (1987) Purification and properties of virus particles, infectious subviral particles, and cores of bluetongue virus serotypes 1 and 4. Virology 157:375-386
48. Mertens PP, Burroughs JN, Walton A, Wellby MP, Fu H, O'Hara RS, Brookes SM, Mellor PS (1996) Enhanced infectivity of modified bluetongue virus particles for two insect cell lines and for two Culicoides vector species. Virology 217:582-593
49. Mertens P, Attoui H, Duncan R, Dermody T (2005) Reoviridae. In: Fauquet C, Mayo J, Maniloff J, Desselberger U, Ball L (eds) Virus taxonomy. Eighth report of the International Committee on Taxonomy of Viruses. Elsevier/Academic Press, London, pp 447-454
50. Mohd Jaafar F, Attoui H, Bahar MW, Siebold C, Sutton G, Mertens PP, De Micco P, Stuart DI, Grimes JM, De Lamballerie X (2005) The structure and function of the outer coat protein VP9 of Banna virus. Structure 13:17-28
51. Moss SR, Nuttall PA (1994) Subcore- and core-like particles of Broadhaven virus (BRDV), a tick-borne orbivirus, synthesized from baculovirus expressed VP2 and VP7, the major core proteins of BRDV. Virus Res 32:401-407
52. Nakagawa A, Miyazaki N, Taka J, Naitow H, Ogawa A, Fujimoto Z, Mizuno H, Higashi T, Watanabe Y, Omura T, Cheng RH, Tsukihara T (2003) The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins. Structure 11:1227-1238
53. Nason EL, Rothagel R, Mukherjee SK, Kar AK, Forzan M, Prasad BV, Roy P (2004) Interactions between the inner and outer capsids of bluetongue virus. J Virol 78:8059-8067
54. Prasad BV, Rothnagel R, Zeng CQ, Jakana J, Lawton JA, Chiu W, Estes MK (1996) Visualization of ordered genomic RNA and localization of transcriptional complexes in rotavirus. Nature 382:471-473
55. Ramadevi N, Burroughs NJ, Mertens PP, Jones IM, Roy P (1998) Capping and methylation of mRNA by purified recombinant VP4 protein of bluetongue virus. Proc Natl Acad Sci U S A 95:13537-13542
56. Reinisch KM, Nibert ML, Harrison SC (2000) Structure of the reovirus core at 3.6 Å resolution. Nature 404:960-967
57. Roy P, Fukusho A, Ritter GD, Lyon D (1988) Evidence for genetic relationship between RNA and DNA viruses from the sequence homology of a putative polymerase gene of bluetongue virus with that of vaccinia virus: conservation of RNA polymerase genes from diverse species. Nucleic Acids Res 16:11759-11767
58. Schoehn G, Moss SR, Nuttall PA, Hewat EA (1997) Structure of Broadhaven virus by cryoelectron microscopy: correlation of structural and antigenic properties of Broadhaven virus and bluetongue virus outer capsid proteins. Virology 235:191-200
59. Stauber N, Martinez-Costas J, Sutton G, Monastyrskaya K, Roy P (1997) Bluetongue virus VP6 protein binds ATP and exhibits an RNA-dependent ATPase function and a helicase activity that catalyze the unwinding of double-stranded RNA substrates. J Virol 71:7220-7226
60. Stuart D (1993) Viruses. Curr Opin Struct Biol 3:167-174
61. Stuart DI, Gouet P, Grimes J, Malby R, Diprose J, Zientara S, Burroughs JN, Mertens PP (1998) Structural studies of orbivirus particles. Arch Virol Suppl 14:235-250
62. Tan BH, Nason E, Staeuber N, Jiang W, Monastryrskaya K, Roy P (2001) RGD tripeptide of bluetongue virus VP7 protein is responsible for core attachment to Culicoides cells. J Virol 75:3937-3947
63. Tao Y, Farsetta DL, Nibert ML, Harrison SC (2002) RNA synthesis in a cage - structural studies of reovirus polymerase lambda3. Cell 111:733-745
64. Taraporewala ZF, Chen D, Patton JT (2001) Multimers of the bluetongue virus non-structural protein, NS2, possess nucleotidyl phosphatase activity: similarities between NS2 and rotavirus NSP2. Virology 280:221-231
65. Urakawa T, Ritter DG, Roy P (1989) Expression of largest RNA segment and synthesis of VP1 protein of bluetongue virus in insect cells by recombinant baculovirus: association of VP1 protein with RNA polymerase activity. Nucleic Acids Res 17:7395-7401
66. Van Dijk AA, Huismans H (1988) In vitro transcription and translation of bluetongue virus mRNA. J Gen Virol 69:573-581
67. Wikoff WR, Liljas L, Duda RL, Tsuruta H, Hendrix RW, Johnson JE (2000) Topologically linked protein rings in the bacteriophage HK97 capsid. Science 289:2129-2133
68. Yazaki K, Miura K (1980) Relation of the structure of cytoplasmic polyhedrosis virus and the synthesis of its messenger RNA. Virology 105:467-479
69. Zhao Y, Thomas C, Bremer C, Roy P (1994) Deletion and mutational analyses of bluetongue virus NS2 protein indicate that the amino but not the carboxy terminus of the protein is critical for RNA-protein interactions. Virology 68:2179-2185
70. Zhou ZH, Zhang H, Jakana J, Lu XY, Zhang JQ (2003) Cytoplasmic polyhedrosis virus structure at 8 Å by electron cryomicroscopy: structural basis of capsid stability and mRNA processing regulation. Structure 11:651-663