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Volumn 2006, Issue , 2006, Pages 159-168

Optimal phylogenetic reconstruction

Author keywords

Cfn model; Ising model; Jukes Cantor; Phase transitions; Phylogenetics; Reconstruction problem

Indexed keywords

COMPUTER SCIENCE; EVOLUTIONARY ALGORITHMS; MARKOV PROCESSES; MOLECULAR DYNAMICS; PHASE TRANSITIONS; PROBLEM SOLVING; TREES (MATHEMATICS);

EID: 33748097273     PISSN: 07378017     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/1132516.1132540     Document Type: Conference Paper
Times cited : (79)

References (27)
  • 3
    • 21844521007 scopus 로고
    • On the purity of the limiting Gibbs state for the Ising model on the Bethe lattice
    • P. M. Bleher, J. Ruiz, and V. A. Zagrebnov. On the purity of the limiting Gibbs state for the Ising model on the Bethe lattice. J. Statist. Phys., 79(1-2):473-482, 1995.
    • (1995) J. Statist. Phys. , vol.79 , Issue.1-2 , pp. 473-482
    • Bleher, P.M.1    Ruiz, J.2    Zagrebnov, V.A.3
  • 4
    • 0018002532 scopus 로고
    • Taxonomy with confidence
    • J. A. Cavender. Taxonomy with confidence, Math, Biosci., 40(3-4), 1978.
    • (1978) Math, Biosci. , vol.40 , Issue.3-4
    • Cavender, J.A.1
  • 5
    • 0030588055 scopus 로고    scopus 로고
    • Full reconstruction of markov models on evolutionary trees: Identifiability and consistency
    • J. Chang, Full reconstruction of markov models on evolutionary trees: identifiability and consistency. Math. Biosci., 137(51-73), 1996.
    • (1996) Math. Biosci. , vol.137 , Issue.51-73
    • Chang, J.1
  • 8
    • 0000161374 scopus 로고    scopus 로고
    • Efficient algorithms for inverting evolution
    • M. Farach and S. Kannan. Efficient algorithms for inverting evolution. J. ACM., 46(4):437-449, 1999.
    • (1999) J. ACM. , vol.46 , Issue.4 , pp. 437-449
    • Farach, M.1    Kannan, S.2
  • 9
    • 84959807796 scopus 로고
    • A probability model for inferring evolutionary trees
    • J. S. Farris. A probability model for inferring evolutionary trees, Syst. Zool., 22(4):250-256, 1973.
    • (1973) Syst. Zool. , vol.22 , Issue.4 , pp. 250-256
    • Farris, J.S.1
  • 12
    • 0007226988 scopus 로고
    • Remarks on the limiting Gibbs states on a (d + 1)-tree
    • Y. Higuchi. Remarks on the limiting Gibbs states on a (d + 1)-tree. Publ. Res. Inst. Math. Sci., 13(2):335-348, 1977.
    • (1977) Publ. Res. Inst. Math. Sci. , vol.13 , Issue.2 , pp. 335-348
    • Higuchi, Y.1
  • 13
    • 0000572082 scopus 로고    scopus 로고
    • On the externality of the disordered state for the Ising model on the Bethe lattice
    • D. Ioffe. On the externality of the disordered state for the Ising model on the Bethe lattice. Lett. Math. Phys., 37(2):137-143, 1996.
    • (1996) Lett. Math. Phys. , vol.37 , Issue.2 , pp. 137-143
    • Ioffe, D.1
  • 14
    • 4544264380 scopus 로고    scopus 로고
    • Robust reconstruction on trees is determined by the second eigenvalue
    • S. Janson and E. Mossel. Robust reconstruction on trees is determined by the second eigenvalue. Am. Probab., 32:2630-2649, 2004.
    • (2004) Am. Probab. , vol.32 , pp. 2630-2649
    • Janson, S.1    Mossel, E.2
  • 15
    • 0000732090 scopus 로고
    • Mammalian protein metabolism
    • H. N. Munro, editor. Academic Press
    • T. H. Jukes and C. Cantor. Mammalian protein metabolism. In H. N. Munro, editor, Evolution of protein molecules, pages 21-132. Academic Press, 1969.
    • (1969) Evolution of Protein Molecules , pp. 21-132
    • Jukes, T.H.1    Cantor, C.2
  • 16
    • 5644296193 scopus 로고    scopus 로고
    • Glauber dynamics on trees: Boundary conditions and mixing time
    • F. Martinelli, A. A. Sinclair, and D. Weitz. Glauber dynamics on trees: boundary conditions and mixing time. Comm. Math. Phys., 250(2):301-334, 2004.
    • (2004) Comm. Math. Phys. , vol.250 , Issue.2 , pp. 301-334
    • Martinelli, F.1    Sinclair, A.A.2    Weitz, D.3
  • 18
    • 0032363381 scopus 로고    scopus 로고
    • Recursive reconstruction on periodic trees
    • E. Mossel. Recursive reconstruction on periodic trees. Random Structures Algorithms, 13(1):81-97, 1998.
    • (1998) Random Structures Algorithms , vol.13 , Issue.1 , pp. 81-97
    • Mossel, E.1
  • 19
    • 0035638147 scopus 로고    scopus 로고
    • Reconstruction on trees: Beating the second eigenvalue
    • E. Mossel. Reconstruction on trees: beating the second eigenvalue. Ann. Appl. Probab., 11(1):285-300, 2001.
    • (2001) Ann. Appl. Probab. , vol.11 , Issue.1 , pp. 285-300
    • Mossel, E.1
  • 21
    • 2442663027 scopus 로고    scopus 로고
    • Phase transitions in phyiogeny
    • E. Mossel. Phase transitions in phyiogeny. Trans. Amer. Math. Soc., 356(6):2379-2404, 2004.
    • (2004) Trans. Amer. Math. Soc. , vol.356 , Issue.6 , pp. 2379-2404
    • Mossel, E.1
  • 22
    • 1842550501 scopus 로고    scopus 로고
    • Information flow on trees
    • E. Mossel and Y. Peres. Information flow on trees. Ann. Appl. Probab., 13(3):817-844, 2003.
    • (2003) Ann. Appl. Probab. , vol.13 , Issue.3 , pp. 817-844
    • Mossel, E.1    Peres, Y.2
  • 23
    • 0346671146 scopus 로고    scopus 로고
    • A phase transition for a random cluster model on phylogenetic trees
    • E. Mossel and M. Steel. A phase transition for a random cluster model on phylogenetic trees. Math. Biosci., 187(2):189-203, 2004.
    • (2004) Math. Biosci. , vol.187 , Issue.2 , pp. 189-203
    • Mossel, E.1    Steel, M.2
  • 24
    • 0001879933 scopus 로고
    • Molecular studies of evolution: A source of novel statistical problems
    • S. S. Gupta and J. Yackel, editors
    • J. Neyman. Molecular studies of evolution: a source of novel statistical problems. In S. S. Gupta and J. Yackel, editors, Statistical desicion theory and related topics, pages 1-27. 1971.
    • (1971) Statistical Desicion Theory and Related Topics , pp. 1-27
    • Neyman, J.1
  • 26
    • 0000318254 scopus 로고
    • Markov random fields on an infinite tree
    • F. Spitzer. Markov random fields on an infinite tree. Ann. Probability, 3(3):387-398, 1975.
    • (1975) Ann. Probability , vol.3 , Issue.3 , pp. 387-398
    • Spitzer, F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.