High-throughput lipid profiling to identify and characterize genes involved in lipid metabolism, signaling, and stress response

Functional Lipidomics

Volumn , Issue , 2005, Pages 307-322

  Welti, Ruth ^a   Shah, Jyoti ^a   LeVine, Steven ^b   Esch, Wynn ^c   Williams, Todd ^c   Wang, Xuemin ^d  

^a KANSAS STATE UNIVERSITY   (United States)

^b UNIVERSITY OF KANSAS SCHOOL OF MEDICINE   (United States)

^c UNIVERSITY OF KANSAS   (United States)

^d UNIVERSITY OF MISSOURI ST LOUIS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 33747879775     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1201/9781420027655     Document Type: Chapter

References (33)

1. Brügger, B., Erben, G., Sandhoff, R., Wieland, F.T., and Lehmann, W.D. Quantitative analysis of biological membrane lipids at the low picomole level by nano-electrospray ionization tandem mass spectrometry. Proc. Natl. Acad. Sci. USA 1997, 94, 2339-2344.
2. Welti, R., Li, W., Li, M., Sang, Y., Biesiada, H., Zhou, H-E., Rajashekar, C.B., Williams, T.D., and Wang. X. Profiling membrane lipids in plant stress responses: role of phospholipase Dαin freezing-induced lipid changes in Arabidopsis. J. Biol. Chem. 2002, 277, 31994-32002.
3. Welti, R., Wang, X., and Williams, T.D. Electrospray ionization tandem mass spectrometry scan modes for plant chloroplast lipids. Anal. Biochem. 2003, 314, 149-152.
4. Esch, S.W., Williams, T.D., Biswas, S., Chakrabarty, A., and LeVine, S.M. Sphingolipid profile in the CNS of the Twitcher (globoid cell leukodystrophy) mouse: A lipidomics approach. Cell. Mol. Biol. 2003, 49, 779-787.
5. Leibisch, G., Drobnik, W., Reil, M., Trümbach, B., Arnecke, R., Olgenmöller, B., Roscher, A., and Schmitz, G. Quantitative measurement of different ceramide species from crude cellular extracts by electrospray ionization tandem mass spectrometry (ESI-MS/MS). J. Lipid Res. 1999, 40, 1539-1546.
6. Whitfield, P.D., Sharp, P.C., Taylor, R., and Meikle, P. Quantification of galactosylsphingosine in the twitcher mouse using electrospray ionization-tandem mass spectrometry. J. Lipid Res. 2001, 42, 2092-2095.
7. Colsch, B., Afonso, C., Popa, I., Portoukalian, J., Fournier, F., Tabet, J.-C., and Baumann, N. Characterization of the ceramide moieties of sphingoglycolipids from mouse brain by ESI-MS/MS: identification of ceramides containing sphingadienine. J. Lipid Res. 2004, 45, 281-286.
8. Hsu, F.-F. and Turk, J. Structural determination of sphingomyelin by tandem mass spectrometry with electrospray ionization. J. Am. Soc. Mass Spec. 2000, 11, 437-449.
9. Bligh, E.G. and Dyer, W.J. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol. 1959, 37, 911-917.
10. Wang, X. Plant phospholipases. Annu. Rev. Plant Physiol. Plant Mol. Biol. 2001, 52, 211-231.
11. Wang, X. Lipid signaling. Curr. Opin. Plant Biol. 2004, 7, 329-336.
12. Qin, C. and Wang, X. The Arabidopsis phospholipase D family. Characterization of a calcium-independent and phosphatidylcholine-selective PLD zeta 1 with distinct regulatory domains. Plant Physiol. 2002, 128, 1057-1068.
13. Wang, X. Phospholipase D in hormonal and stress signaling. Curr. Opin. Plant Biol. 2002, 5, 408-414.
14. Li, W., Li, M., Zhang, W., Welti, R., and Wang X. The plasma membrane-bound phospholipase D enhances freezing tolerance in Arabidopsis. Nature Biotech. 2004, 22, 427-433.
15. Sang, Y., Cui, D., and Wang, X. Phospholipase D and phosphatidic acid-mediated generation of superoxide in Arabidopsis. Plant Physiol. 2001, 126, 1449-1458.
16. 2-induced cell death in Arabidopsis. Plant Cell 2003, 15, 2285-2295.
17. Pappan, K., Austin-Brown, S., Chapman, K.D., and Wang, X. Substrate selectivities and lipid modulation of plant phospholipase D, -, and -. Arch. Biochem. Biophys. 1998, 353, 131-140.
18. Nandi, A., Krothapalli, K., Buseman, C., Li, M., Welti, R., Enyedi, A., and Shah, J. The Arabidopsis thaliana sfd mutants affect plastidic lipid composition and suppress dwarfing, cell death and the enhanced disease resistance phenotypes resulting from the deficiency of a fatty acid desaturase. Plant Cell 2003, 15, 2383-2398.
19. Nandi, A., Welti, R., and Shah, J. The Arabidopsis thaliana dihydroxyacetone phosphate reductases gene suppressor of fatty acid desaturase deficiency1 is required for glycerolipid metabolism and for the activation of systemic acquired resistance. Plant Cell 2004, 16, 465ñ477.
20. Shah, J., Kachroo, P.K., Nandi, A., and Klessig, D.F. A recessive mutation in the Arabidopsis SSI2 gene confers SA-and NPR1-independent expression of PR genes and resistance against bacterial and oomycete pathogens. Plant J. 2001, 25, 563-574.
21. Sekine, K.T., Nandi, A., Ishihara, T., Hase, S., Ikegami, M., Shah, J., and Takahashi, H. Enhanced resistance to cucumber mosaic virus in the Arabidopsis thaliana ssi2 mutant is mediated via an SA-independent mechanism. Mol. Plant-Microbe Interaction 2004, 17, 623-632.
22. Kachroo, P, Shanklin, J., Shah, J., Whittle, E.J., Klessig, D.F. A fatty acid desaturase modulates the activation of defense signaling pathways in plants. Proc. Natl. Acad. Sci. USA 2001, 98, 9448-9453.
23. Vanier, M.T., and Svennerholm, L. Chemical pathology of Krabbe’s disease. III. Ceramide-hexosides and gangliosides of brain. Acta Paediatr. Scand. 1975, 64, 641-648.
24. Svennerholm, L., Vanier, M.T., and Mansson, J.E. Krabbe disease: a galactosylsphingosine (psychosine) lipidosis. J. Lipid Res. 1980, 21, 53-64.
25. gisu, H., Shimomura, K., Kishimoto, Y., and Suzuki, K. Lipids of developing brain of twitcher mouse. An authentic murine model of human Krabbe disease. Brain 1983, 106, 405-417.
26. Igisu, H. and Suzuki, K. Progressive accumulation of toxic metabolite in a genetic leukodystrophy. Science 1984, 224, 753-755.
27. Miyatake, T. and Suzuki, K. Globoid cell leukodystrophy: additional deficiency of psychosine galactosidase. Biochem. Biophys. Res. Commun. 1972, 48, 539-543.
28. Eto, Y., Suzuki, K., and Suzuki, K. Globoid cell leukodystrophy (Krabbe’s disease): isolation of myelin with normal glycolipid composition. J. Lipid Res. 1970, 11, 473-479.
29. Vanier, M.T. and Svennerholm, L. Chemical pathology of Krabbe’s disease. II. Fatty acid composition of cerebrosides, sulfatides and sphingomyelins in brain. Acta Paediatr. Scand. 1974, 63, 501-506.
30. Norton, W.T. and Poduslo, S.E., Biochemical studies of metachromatic leukodystrophy in three siblings. Acta Neuropathol. (Berl.) 1982, 57, 188-196.
31. Taketomi, T., Hara, A., Kitazawa, N., Takada, K., and Nakamura, H. An adult case of adrenoleukodystrophy with features of olivo-ponto-cerebellar atrophy: II. Lipid biochemical studies. Jpn. J. Exp. Med. 1987, 57, 59-70.
32. Biswas, S., Biesiada, H., Williams, T.D., and LeVine, S.M. Delayed clinical and pathological signs in twitcher (globoid cell leukodystrophy) mice on a C57BL/6 x CAST/Ei background. Neurobiol. Dis. 2002, 10, 344-357.
33. Comfurius, P., and Zwaal, R.F. The enzymatic synthesis of phosphatidylserine and purification by CM-cellulose column chromatography. Biochim. Biophys. Acta. 1977, 488, 36-42.